Msep053079.2
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068367.1:1142272589-1142272984[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-13 4.2e-11 46.4 0.0 5 43 1 39 1 41 0.91
Sequence Information
- Coding Sequence
- ATGAAAACGGCAGTGGAAGCAGTACGAAACGGGAAAATGGGAAGTTTTAAGGCTGCAAGAATTTATAATGTTCCTCAAACGACCCTAGAACGGTATGTGAAAGACGAGATGAAGAGTTCCACAGATGTTGTAAACACGAAGCTGGGAAGAAAACAATATCTACCATCCGATCTGGAGAAAGATCTCGCCGAACACTGCATTCTTTTGGAAGAACGATATTTTGGTTTGTCACAAAAAGACCTACGTCGTTTAGCTTTTCCGTTGGCGGAGAAGAATGGAATCGCACATCCATTTTCAAAGAAGAGTGAATCAGCGGAGAGAAAATGGGTAAAGAACTTCTTGCGAAAATCCGCAGCTCGCCGTTCGATCGCCGCAATTTCACGCTCGAGGCAGTAG
- Protein Sequence
- MKTAVEAVRNGKMGSFKAARIYNVPQTTLERYVKDEMKSSTDVVNTKLGRKQYLPSDLEKDLAEHCILLEERYFGLSQKDLRRLAFPLAEKNGIAHPFSKKSESAERKWVKNFLRKSAARRSIAAISRSRQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00943609;
- 90% Identity
- iTF_00943738;
- 80% Identity
- -