Msep064157.1
Basic Information
- Insect
- Magicicada septendecula
- Gene Symbol
- -
- Assembly
- GCA_034769895.1
- Location
- CM068367.1:1388779435-1388780976[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.084 13 9.6 0.0 12 28 28 45 26 62 0.90 2 4 0.0094 1.5 12.6 0.0 12 35 76 101 75 107 0.79 3 4 0.045 7.2 10.4 0.0 12 28 106 123 104 125 0.90 4 4 0.019 3.1 11.6 0.0 12 28 154 171 152 191 0.82
Sequence Information
- Coding Sequence
- ATGACAGGTGTACGCAAGATTAGACTACCTGGTACACGTAAATATGGATGTTGTGGCTTGGCTTGTTCAAAGAAGAAGAAAATCCTTCGAGGTGCCCTCCTTAGCTTCTGCAAAGCTGCAAAGAAGCATTCAATTGACAAAATAAAACCGACTCGTGTTCTTAATGGTAAAAACGACAAGAAGCGGACAAGATTGCCACTAACGGCGTTTTCATTAACGCCAAATATACTTCGAGGTGCCTGCCTCAGCTTCTGCAAAGCTGCAAAGAAGTATTCCATTGACAAAATTGGCTTGGCTTGTTCAAGGAAGAAGAAAATCCTTCGAGGTGCCCGCCTTAGCTTCTGCAAAGCTGCAAGGAAGCATTCGATTGACAAAATAAAACCGACTCGTGTTCTTAATAGTAAAATCGACAAGAAGCGGACACGATTGCCGCTAACGGCGTTTTCATTAATGCCAAATATACTTCGAGGTGCCTGCCTCAGCTTCTGCAAAGCTGCAAAGAAGTATTCGGTTGACAAAATAAAACCGACTCGTGTTCTTAATAGTAAACTCAACAAGAAGCGAACTCAATTGCCGCTAATGGCATTTTCATTAACACCAAATATGGGACTCATATTAAAGTGTCGTCTTCAATCCAGTGACAAGAATATTGCTAAATTAATTGATAATGTTTTTGACTACATTTGGGTACGATCATGCATTGCGCGTTATGGTAGTGCATTATCTTTTAGGTTCATATTTGGATTCACAGCAATCATTAATTGCAAGTACAAAATTTTGTATAATGAATCTAAATATTTAGAACAAACACAAAACAAAGAAAATATAGATAATTGCATAGACACAGTAAAACCAATACAACTTGTACCCACTTTTGAATATCTTTTGAAGTTGGATCTGTTAAATTTTCGAATCAGCACTTTACCCTCTGTTAACCTAAGTGAGAAGTGTAGTAgttacatcttaaattataaaaccatgacggTACCAGATTGTAGAAAAAAAGTATTACAATATAATTTATGGTTGGATGACATAGTTCTTGacttgtttttaattgttttaagaaacaaTTCAGAATTCAAACCAGTTACGACATGGAGTATTAATTACTTCCAGCTCGTGGAACCAGTTAAGAACAATTCAAAAGATATTCAAATAATTGGTGGAACACCAGATTTTCCACATTGGCACTGTCTGTATTTTGATGGAAGAAAATTACATATATACGACAGTTCCGATCTTGATAGTTATGATCTGTTAGTCCCGATTGAAAAAGAATTCATTGAACAACGTTATCCAAACATTTCTCGAACAGATGTCATTTTTGAAAGCTGCCCaaaacaacaagataattattctTGTGGTGTTTTTGCTGCAGCTAATGCGACAATGTTAGCGTTAGGACACAACCCGTCAGCTATTGGAAATTATGCTGCACATCCGGTCATGTATAACCAAACTGAGTCTACAATCATGAGAGTTCATTTGCTCCGAATGTTGGACAAAAATAAACTAAAAGCATTTCGCTGGAATGGTTGA
- Protein Sequence
- MTGVRKIRLPGTRKYGCCGLACSKKKKILRGALLSFCKAAKKHSIDKIKPTRVLNGKNDKKRTRLPLTAFSLTPNILRGACLSFCKAAKKYSIDKIGLACSRKKKILRGARLSFCKAARKHSIDKIKPTRVLNSKIDKKRTRLPLTAFSLMPNILRGACLSFCKAAKKYSVDKIKPTRVLNSKLNKKRTQLPLMAFSLTPNMGLILKCRLQSSDKNIAKLIDNVFDYIWVRSCIARYGSALSFRFIFGFTAIINCKYKILYNESKYLEQTQNKENIDNCIDTVKPIQLVPTFEYLLKLDLLNFRISTLPSVNLSEKCSSYILNYKTMTVPDCRKKVLQYNLWLDDIVLDLFLIVLRNNSEFKPVTTWSINYFQLVEPVKNNSKDIQIIGGTPDFPHWHCLYFDGRKLHIYDSSDLDSYDLLVPIEKEFIEQRYPNISRTDVIFESCPKQQDNYSCGVFAAANATMLALGHNPSAIGNYAAHPVMYNQTESTIMRVHLLRMLDKNKLKAFRWNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -