Basic Information

Insect: Magicicada septendecula
Gene Symbol: -
Assembly: GCA_034769895.1
Location: CM068368.1:749758976-749778639[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 1.8e-09 2.9e-07 34.1 0.1 2 39 19 56 18 60 0.89

2 6 1.8e-09 2.9e-07 34.1 0.1 2 39 122 159 121 163 0.89

3 6 1.8e-09 2.9e-07 34.1 0.1 2 39 225 262 224 266 0.89

4 6 1.8e-09 2.9e-07 34.1 0.1 2 39 328 365 327 369 0.89

5 6 1.8e-09 2.9e-07 34.1 0.1 2 39 431 468 430 472 0.89

6 6 1.8e-09 2.9e-07 34.1 0.1 2 39 534 571 533 575 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	1.8e-09	2.9e-07	34.1	0.1	2	39	19	56	18	60	0.89
2	6	1.8e-09	2.9e-07	34.1	0.1	2	39	122	159	121	163	0.89
3	6	1.8e-09	2.9e-07	34.1	0.1	2	39	225	262	224	266	0.89
4	6	1.8e-09	2.9e-07	34.1	0.1	2	39	328	365	327	369	0.89
5	6	1.8e-09	2.9e-07	34.1	0.1	2	39	431	468	430	472	0.89
6	6	1.8e-09	2.9e-07	34.1	0.1	2	39	534	571	533	575	0.89

Sequence Information

Coding Sequence: ATGCCTCGAGAATACTTTGGAAAACTTGGGTGTCTTTCCTATCGCAATTACACCAAGGAATCATTAGAGAAAGCAGTCGAATCTGTAATAAACCACAGTTCATCAATAAGGAAAGCTGCAGAAAAaTACGGAATTGCTAAAAACACGATTGTGAACCACATCAATAAAAGGAAAATTGGTGACCGAGTGAGAAGCCCTGGTGGACAGGAGATTTTCACTATGGAAGAGGAGGCGATCATGGTCGCTCATATTGTGGCTACATCCACTTATGGGTTCCCAGTGACTGTGATGGATTTGAAGATCGAGATTATGCCTCGAGAATACTTTGGAAAACTTGGGTGTCTTTCCTATCGCAATTACACCAAGGAATCATTAGAGAAAGCAGTCGAATCTGTAATAAACCACAGTTCATCAATAAGGAAAGCTGCAGAAAAaTACGGAATTGCTAAAAACACGATTGTGAACCACATCAATAAAAGGAAAATTGGTGACCGAGTGAGAAGCCCTGGTGGACAGGAGATTTTCACTATGGAAGAGGAGGCGATCATGGTCGCTCATATTGTGGCTACATCCACTTATGGGTTCCCAGTGACTGTGATGGATTTGAAGATCGAGATTATGCCTCGAGAATACTTTGGAAAACTTGGGTGTCTTTCCTATCGCAATTACACCAAGGAATCATTAGAGAAAGCAGTCGAATCTGTAATAAACCACAGTTCATCAATAAGGAAAGCTGCAGAAAAaTACGGAATTGCTAAAAACACGATTGTGAACCACATCAATAAAAGGAAAATTGGTGACCGAGTGAGAAGCCCTGGTGGACAGGAGATTTTCACTATGGAAGAGGAGGCGATCATGGTCGCTCATATTGTGGCTACATCCACTTATGGGTTCCCAGTGACTGTGATGGATTTGAAGATCGAGATTATGCCTCGAGAATACTTTGGAAAACTTGGGTGTCTTTCCTATCGCAATTACACCAAGGAATCATTAGAGAAAGCAGTCGAATCTGTAATAAACCACAGTTCATCAATAAGGAAAGCTGCAGAAAAaTACGGAATTGCTAAAAACACGATTGTGAACCACATCAATAAAAGGAAAATTGGTGACCGAGTGAGAAGCCCTGGTGGACAGGAGATTTTCACTATGGAAGAGGAGGCGATCATGGTCGCTCATATTGTGGCTACATCCACTTATGGGTTCCCAGTGACTGTGATGGATTTGAAGATCGAGATTATGCCTCGAGAATACTTTGGAAAACTTGGGTGTCTTTCCTATCGCAATTACACCAAGGAATCATTAGAGAAAGCAGTCGAATCTGTAATAAACCACAGTTCATCAATAAGGAAAGCTGCAGAAAAaTACGGAATTGCTAAAAACACGATTGTGAACCACATCAATAAAAGGAAAATTGGTGACCGAGTGAGAAGCCCTGGTGGACAGGAGATTTTCACTATGGAAGAGGAGGCGATCATGGTCGCTCATATTGTGGCTACATCCACTTATGGGTTCCCAGTGACTGTGATGGATTTGAAGATCGAGATTATGCCTCGAGAATACTTTGGAAAACTTGGGTGTCTTTCCTATCGCAATTACACCAAGGAATCATTAGAGAAAGCAGTCGAATCTGTAATAAACCACAGTTCATCAATAAGGAAAGCTGCAGAAAAaTACGGAATTGCTAAAAACACGATTGTGAACCACATCAATAAAAGGAAAATTGGTGACCGAGTGAGAAGCCCGATTGAgaagaagaaggtggacaggagaTTTTCACTATGGAAGAGGAGGCGATCATGGTCGCTCATATTGTGGCTACATCCACTTATGGGTTCCCAGTGA
Protein Sequence: MPREYFGKLGCLSYRNYTKESLEKAVESVINHSSSIRKAAEKYGIAKNTIVNHINKRKIGDRVRSPGGQEIFTMEEEAIMVAHIVATSTYGFPVTVMDLKIEIMPREYFGKLGCLSYRNYTKESLEKAVESVINHSSSIRKAAEKYGIAKNTIVNHINKRKIGDRVRSPGGQEIFTMEEEAIMVAHIVATSTYGFPVTVMDLKIEIMPREYFGKLGCLSYRNYTKESLEKAVESVINHSSSIRKAAEKYGIAKNTIVNHINKRKIGDRVRSPGGQEIFTMEEEAIMVAHIVATSTYGFPVTVMDLKIEIMPREYFGKLGCLSYRNYTKESLEKAVESVINHSSSIRKAAEKYGIAKNTIVNHINKRKIGDRVRSPGGQEIFTMEEEAIMVAHIVATSTYGFPVTVMDLKIEIMPREYFGKLGCLSYRNYTKESLEKAVESVINHSSSIRKAAEKYGIAKNTIVNHINKRKIGDRVRSPGGQEIFTMEEEAIMVAHIVATSTYGFPVTVMDLKIEIMPREYFGKLGCLSYRNYTKESLEKAVESVINHSSSIRKAAEKYGIAKNTIVNHINKRKIGDRVRSPIEKKKVDRRFSLWKRRRSWSLILWLHPLMGSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -