Basic Information

Gene Symbol
Kdm5
Assembly
GCA_034769895.1
Location
CM068376.1:183095967-183140084[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-25 5.2e-20 75.7 0.0 2 89 65 148 64 148 0.95

Sequence Information

Coding Sequence
ATGATACCCCTGGATTCAAGCTGTGGAGGGGATAGCAATGTCGCATTAACGGTGCTCTACCACCGCTCATGTGAACTACTGCTTAACATTGGCCAACCGGATTGGCAACCACCATTTGCAGTGGACGTTGACAAGTTCAAATTCACTCCAAGGATACAAAGACTAAATGAGTTAGAGGCTAAGACACGGATCAAACTGAACTTTTTAGATCAAATTGCCAAATTCTGGGAACTCCAAGGATCGTCACTGAAAATTCCAATGGTTGAAAGACGAGCATTAGATCTTTACTCTTTACATAGATTAGTACAAGAAGAAGGTGGCTTGGAAGTTGTCAGTAAAGACCGTAAATGGGGGAAAATACAGACTAGAATGGGACTTCCAAATGGCAGAAGCCTGGGTACTCTGTTGAAAAGCCATTACGAACGGATTTTGTATCCATTTGATGTATTCCAGCAAAGCCCAAAAGCCTTGGGGGATGTTAAAGTATCATCAGTAAGAAATGACAATGAGAAGCAAGATCAAGATTATAAGCCACATGGGATTCCATCACGCCAGGCAATAAAACCACAGAATCAAGGACAACATGATCGTAGAGCAAAACGCTACTGCACTGCTGGAAAAAATGCTGATGCCATGTCAGAAGATAATGACACTGATAAGGAGTTTTGTGGTGCGGGTCCAAAAGTCACTAGTACCATTAAAGAAGAAAAGCCAAAGACCAAAACAAGGGGGAAGAAAATAACATATGACTATGACCCGctTGCAAAGTACATATGTCACAATTGTGGACGAGGAGATGTGGAAGAGTCTATGTTACTGTGTGACGGGTGTGATGACAGCTATCATACGTTCTGCTTGATGCCACCGTTATTGGAAATACCTAAAGGTGATTGGCGCTGCCCAAAATGTGTCGCAGCAGAAGTTAGCAAACCAATGGAAGCATTTGGTTTTGAACAAGCTCAGCGGGAATATTCCCTGCAGCAATTTGGTGAAATGGCAGATCAGTTTAAGTCTGATTATTTCAATATGCCTGTACACCTTGTTCCTACAAGTTTGGTAGAACGAGAATTTTGGAGAATTGTATCTTCTATCGATGAAGACGTGACTGTAGAGTACGGAGCTGATCTGCACACAATGGACCATGGATCAGGGTTTCCAACAAAAGAGACTGTTTCTAAAGTGGTTGAGTATGAGCATCCTTCAATTAAAAAGTATGCAGAATCAAGTTGGAATTTGAATAATTTACCTGTATTAGAAGGCTCTGTCCTTGGCCATATCAATGCAGACATATCTGGGATGAAAGTTCCTTGGATGTATGTTGGTATGTGTTTTGCAACATTCTGTTGGCACAATGAGGATCACTGGAGTTATTCAATAAATTATCTTCACTGGGGAGAACCTAAAACATGGTATGGTGTTCCTGGTAGTGAAGCAGAGAATTTTGAACAGTCAATGAAATCTGCAGCACAAGAACTTTTCCACTCACAACCAGATTTGTTACATCAGTTAGTTACCATTATGAATCCAAATGTTCTTATGGAAGCAGGAGTGCCAGTGTATCGGACAGATCAACAAGCTGGCGAGTTCGTGATTACGTTCCCAAGAGCATATCATGCAGGGTTCAACCAAGGTTACAACTTTGCTGAAGCTGTGAATTTTGCTCCTGCAGATTGGTTGAAAATTGGACGTGAGTGTATAACGCATTATGCCAACTTACATAGGTTTTGCGTATTCTCACATGATGAGCTGGTGTGTAAAATGGCAGTCAATCCAGAAAATCTTGATCCTAGGGTAGCTGCAGCAACATTCCTTGATATGTTAGTCATGGTCGAAACTGAGAGGAAGTACCGGAAAATTCTGTTAGACTGGGGTATATGCGATGCAGAGCGTGAAGCATTTGAATTACTTCCTGATGATGAACGACAGTGTGAAGTATGCAAAACAACGTGTTTTCTATCTGCTGTCACATGTTCTTGTAGTACCCAACATCTTGTATGCTTGAAACACTATGATGAACTCTGCAAATGTCCACCAAAGAATCATACACTGAGGTATCGCTACACATTGGATGAGTTACCAGCGATGTTGCACAAAGTGAAGTTAAAAGCAGAGGCTTTTGACACGTGGGTTCTTAATGTGCAAAAAGCTTTGGGCTGTTCTCGTTCAGCCCATAAACCATTTGATTTAGAAGGTTTGAAAGGTCTTGTGGCAGAGGCTGAATTCAAAAAGTTTCCAGAAACTGAACTGCTCCAGGCCCTGGCTTATTCCGTACAAGAAGCTGAAAAATGTTCAAGCATTGCACAGCAGTTAGATTGTAATAGAGTACGGACGAGGACAAGAGTTACTATGGACTCTAAGTGTAAATTGACCGTGGATGAGTTGATTATGTTCAATACCCAGATCGAAAACCTTGCATGTAAAATAAAAGAAGCAGATTCTGTAAAAGCACTAGTGGATAAAGTGAAAAATTTCCAAGAAAAAGCTAAACGCTTACTACAGGATAATGAATTTGTGCCTTCAGCTGATATTACAAGTTGTATCGAATTAGGAAACGAATTGGATATTGAACTGCCTGAAATTGGAAACTTAAAAGTGAAACTAGAACAAACTCAGTGGCTTGAAGAAAAGAAATCTCTAATGGAGGACAAAAGTTCAGTCACATTGGAAGCAATAAGAAATCTTATTAATGCAGGCCTGATAGTTCCACCTACTTATTCAGTAGAAAAGAATGTTGctgaattaaaagaattagaaGAAAAGATTAATGCATGGGAAGATAAAGCAAAGAAAGTCTTAAGTGGAAAGAATCTGCCAACAATTACACAGCTGGAAAACCTTCTGAAGGAAGCTGACAGTGTTGGAGGCTGCTTGCCTACAAAGGCTGTCATCAAAGAAACAGTTAAAAAAGCGAGAGATTGGATAGTGAAGTCCGATAGCCTAATGTTGGGCCTCTTAATGTCAatgccccaacatttgatggaagcactaacTGGGTGGTGTATCTTTGGCAGTTATACAAAGCTATTGCTTATGCATATCAGAGTGTTAGGAAAGGCACCTAACACCTGGGTACACCTGGATTTCCTCAAGTGTAGCCACCAAGTGCTGATTGCTAACATTGTCAATGAAGTAATTCTTGCCACGGATGTTATGAATGCCTGTGGGTTTATTGTGGATGAAAGAGAATGTCCTGTTGGTAGGCTAAGAGAGAATAAGGTTTTGCATGGCAGAAATGATAGGATCGCCCAATCATTTAATCTAGCAATTGACTGA
Protein Sequence
MIPLDSSCGGDSNVALTVLYHRSCELLLNIGQPDWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVERRALDLYSLHRLVQEEGGLEVVSKDRKWGKIQTRMGLPNGRSLGTLLKSHYERILYPFDVFQQSPKALGDVKVSSVRNDNEKQDQDYKPHGIPSRQAIKPQNQGQHDRRAKRYCTAGKNADAMSEDNDTDKEFCGAGPKVTSTIKEEKPKTKTRGKKITYDYDPLAKYICHNCGRGDVEESMLLCDGCDDSYHTFCLMPPLLEIPKGDWRCPKCVAAEVSKPMEAFGFEQAQREYSLQQFGEMADQFKSDYFNMPVHLVPTSLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKETVSKVVEYEHPSIKKYAESSWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAENFEQSMKSAAQELFHSQPDLLHQLVTIMNPNVLMEAGVPVYRTDQQAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYANLHRFCVFSHDELVCKMAVNPENLDPRVAAATFLDMLVMVETERKYRKILLDWGICDAEREAFELLPDDERQCEVCKTTCFLSAVTCSCSTQHLVCLKHYDELCKCPPKNHTLRYRYTLDELPAMLHKVKLKAEAFDTWVLNVQKALGCSRSAHKPFDLEGLKGLVAEAEFKKFPETELLQALAYSVQEAEKCSSIAQQLDCNRVRTRTRVTMDSKCKLTVDELIMFNTQIENLACKIKEADSVKALVDKVKNFQEKAKRLLQDNEFVPSADITSCIELGNELDIELPEIGNLKVKLEQTQWLEEKKSLMEDKSSVTLEAIRNLINAGLIVPPTYSVEKNVAELKELEEKINAWEDKAKKVLSGKNLPTITQLENLLKEADSVGGCLPTKAVIKETVKKARDWIVKSDSLMLGLLMSMPQHLMEALTGWCIFGSYTKLLLMHIRVLGKAPNTWVHLDFLKCSHQVLIANIVNEVILATDVMNACGFIVDERECPVGRLRENKVLHGRNDRIAQSFNLAID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-