Basic Information

Insect: Macrosoma leucophasiata
Gene Symbol: -
Assembly: GCA_036365455.1
Location: JAWQUS010000030.1:16971057-16993020[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.64 53 5.3 4.6 2 20 376 394 376 397 0.92

2 10 0.0016 0.13 13.5 0.9 2 23 405 427 405 427 0.96

3 10 0.19 16 6.9 2.5 1 23 431 453 431 453 0.97

4 10 3 2.5e+02 3.2 0.0 1 23 458 483 458 483 0.95

5 10 0.19 16 6.9 0.6 2 21 524 543 523 548 0.91

6 10 0.00022 0.018 16.2 0.4 2 23 566 588 566 588 0.97

7 10 0.027 2.3 9.6 0.4 2 23 641 662 641 662 0.96

8 10 0.00014 0.012 16.8 0.3 2 23 668 690 667 690 0.96

9 10 0.0012 0.097 13.9 2.1 1 23 699 722 699 722 0.91

10 10 8.9e-05 0.0074 17.5 2.9 1 23 728 751 728 752 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.64	53	5.3	4.6	2	20	376	394	376	397	0.92
2	10	0.0016	0.13	13.5	0.9	2	23	405	427	405	427	0.96
3	10	0.19	16	6.9	2.5	1	23	431	453	431	453	0.97
4	10	3	2.5e+02	3.2	0.0	1	23	458	483	458	483	0.95
5	10	0.19	16	6.9	0.6	2	21	524	543	523	548	0.91
6	10	0.00022	0.018	16.2	0.4	2	23	566	588	566	588	0.97
7	10	0.027	2.3	9.6	0.4	2	23	641	662	641	662	0.96
8	10	0.00014	0.012	16.8	0.3	2	23	668	690	667	690	0.96
9	10	0.0012	0.097	13.9	2.1	1	23	699	722	699	722	0.91
10	10	8.9e-05	0.0074	17.5	2.9	1	23	728	751	728	752	0.97

Sequence Information

Coding Sequence: atgaAGACTGAAGCGGAGGCTGTTATGGAGGAGTTGAAGCTGGAACTGAAGTTGCGCGATACAGATAGAAAACCCAGTTCGCCTAGTGTGCGACGACCAAAGTGTGGGTTTGATCTCCTCACCGTGACACATGTATTTCCATCGAATCCAGAACTTAAATCAAAATGGCTTAAAGCAATTGGTCGCCCAGACTGGAAACCACTCAAAAGCATGCGGTTATGCAGTGCGCATTTCagtgaaaataatattcattataataaaaatagaataagatTGAAAGAGGATGCCTATCCTGTTTATTTATTGCCTTGGGATTCCAACTTTGATGCCTCGCATGTAAAAGCGTGCAGAGTGTGCCTAGCAACGGATTTGAAGGTGTATAGTATTCAAGACAAAGATATTACAAGATGTATGGATTCCATAATGGAATTAAAAGCAAATTTAAGAACCGACGGGTTACCACCGTATGTGTGTTATATCTGCGCAGCGCATTTACGAAagtgttacaattttttaaatagatgtCGGTCCGCACAGACCATCCTGCGGGACATATTCAAACAACATGGTCAGATCAATAAACAACTAGTTGAGGAGCGAAACAGACATGAACCAAATCTGCTGACTACATTAACTTACTATTACCCTCCTTTCGCTGAAGAGAAGTTTATACCATTTGATGACGACATAAAAACAGAGTGTgtacttaaaaaatacacaCCAGAAAACTACTATGATGAGCAGGTGAAATATGAAGATGAGGGTGATGTACATGTGAAATCGTCAGAAGCGAGGGTAGACGTTAAAATTATAGTGGAACATGATAATACAGACGACGATTATCTGGACGATATTGGACAAAGCTCACCGCGCTTAGAGTCACAAGAAGATGTTAAATCTTCAGACGTTCCTGAAGAAATGGACAAGCGAACAGAAgcATCAAAACCGAAGAAAAAGGATCATTTATCTCGGCCAAAAACGAAGAAGATATCGAAAAAAGCACTTCTCGCAGAAGATCTAAAGAACTTGAAGGAATATTTCAATATTGTGGAGTTGTCTgAAGAGGAGCAGTTAAGTGAGTGGCTCAATAACAGATGTCATGCGACGAGCCTCCCTACAATCGCCAAATGTGATGTATGCTTTAAACAATTCGCACATGAAGATTGTTATAAAACACATCTGCCGAAACATGAACCGAGTCGAGGCAAAGCTGTGTGTCCGATATGCAAGGAGAGGTTCAAGAACCATGTCCTCGTGCGGACGCACGTTAAATCTGCACACTCAAAAAAGTACACCTGCAAGTTATGCCCCAAAGTCCGCTATAATAGGCGCACAGCCAAGACTCACTTTCTGCGTCACACGGGCGCGAAGTTCCGCTGCAAGCGCGAGGGGTGCGGGTTCGAGGCCGGCACCGCGGCCGCCGTCTACACGCACGCGCGCACCGCGCACGCACGCGGCACGCACGCCTGCACCGCGTGCGGCCGCTCCTGCCTCACGCCGCAGGCTCTGGGGCTGCACGTTCACGCCGCGCACCCGGATCTCAAGGACGCAGAAGGAAGTCCAGATTCCCGTTGCAACGAGTGCGACTTGAACTTCGTATCGGAAGCTGCCCGACGGGTGCACTTGCTCAGTTTTTGTCCTCATACGAATAAATCGGATCCCAGCGACACAACAAAAGAGGATGCATTTGAGAACACGTGCACGCAATGCGGCGAGGCTTGCGCGTCGGCGGCAGAACTGACGTCACACGTGCGCACCACGCACCGCTACCTCAAGCCCATACAGCGTGGGCCCAACGACTCCTATCCCACGCCGTGCGAATATTGCGAGGTGAGTTTGGGCAGCCGTCGCGAGCACTTCTTGCACGTGTCTCGGAAGCACCCCAGCAAGCGGCACGCCTACCGGACGGTCGTCAACGCCGTCTGCCACCTCTGCGGGAAGGGCCTCCAGAGTGTGGCCTTGTTGAAATCGCACGTACTGCGTCACGCGGCGCCGGCGGTGCGCTGCGAGCAGTGCGGCCGCATGTTCTACGAGAAGTGGCAGCTGGTGAAACACGCGCGCGTGCGGCACGCCGGCCCGGCCGGGCCCCCGCGCCACGCCTGCGCCCAGTGCGGACTCACCTTCGCGGACAGGACGAACTTGCACCGACACTCCACCAGGgtaCACTCGGAAGACACTCCTTACGATTGCCCAATGTGCGacaagaaatttaaatattccACGAGCAAGAATCTTCACATTCGCACGGTCCACCACAAGGAACCGCACCCGCCGCGGAAAAAACGTACTAAAGCGAGAAGCAGCCGCCAAAAAGAGattgaaaattga
Protein Sequence: MKTEAEAVMEELKLELKLRDTDRKPSSPSVRRPKCGFDLLTVTHVFPSNPELKSKWLKAIGRPDWKPLKSMRLCSAHFSENNIHYNKNRIRLKEDAYPVYLLPWDSNFDASHVKACRVCLATDLKVYSIQDKDITRCMDSIMELKANLRTDGLPPYVCYICAAHLRKCYNFLNRCRSAQTILRDIFKQHGQINKQLVEERNRHEPNLLTTLTYYYPPFAEEKFIPFDDDIKTECVLKKYTPENYYDEQVKYEDEGDVHVKSSEARVDVKIIVEHDNTDDDYLDDIGQSSPRLESQEDVKSSDVPEEMDKRTEASKPKKKDHLSRPKTKKISKKALLAEDLKNLKEYFNIVELSEEEQLSEWLNNRCHATSLPTIAKCDVCFKQFAHEDCYKTHLPKHEPSRGKAVCPICKERFKNHVLVRTHVKSAHSKKYTCKLCPKVRYNRRTAKTHFLRHTGAKFRCKREGCGFEAGTAAAVYTHARTAHARGTHACTACGRSCLTPQALGLHVHAAHPDLKDAEGSPDSRCNECDLNFVSEAARRVHLLSFCPHTNKSDPSDTTKEDAFENTCTQCGEACASAAELTSHVRTTHRYLKPIQRGPNDSYPTPCEYCEVSLGSRREHFLHVSRKHPSKRHAYRTVVNAVCHLCGKGLQSVALLKSHVLRHAAPAVRCEQCGRMFYEKWQLVKHARVRHAGPAGPPRHACAQCGLTFADRTNLHRHSTRVHSEDTPYDCPMCDKKFKYSTSKNLHIRTVHHKEPHPPRKKRTKARSSRQKEIEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00942905;
90% Identity: iTF_00942905;
80% Identity: iTF_00942905;