Basic Information

Insect: Macrosoma leucophasiata
Gene Symbol: -
Assembly: GCA_036365455.1
Location: JAWQUS010000012.1:6299768-6317446[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0095 0.79 11.1 0.3 1 23 251 277 251 277 0.95

2 14 1.4 1.2e+02 4.2 1.0 3 23 350 370 349 370 0.96

3 14 1.4 1.2e+02 4.2 0.1 1 23 374 396 374 396 0.89

4 14 0.014 1.2 10.5 1.2 1 23 401 424 401 424 0.94

5 14 7.2 6e+02 2.0 3.5 2 23 431 453 430 453 0.92

6 14 0.0022 0.19 13.0 0.2 2 23 461 483 460 483 0.96

7 14 0.0013 0.11 13.7 5.2 1 23 489 511 489 511 0.98

8 14 0.23 20 6.7 3.0 1 23 724 750 724 750 0.93

9 14 0.0083 0.69 11.3 1.1 2 23 822 843 821 843 0.96

10 14 0.24 20 6.6 0.2 1 23 847 869 847 869 0.97

11 14 0.00091 0.076 14.3 0.5 1 23 874 897 874 897 0.95

12 14 0.0016 0.13 13.5 0.4 2 23 934 956 933 956 0.96

13 14 0.003 0.25 12.6 3.7 1 23 962 984 962 984 0.97

14 14 0.00015 0.013 16.7 0.9 1 23 990 1012 990 1012 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0095	0.79	11.1	0.3	1	23	251	277	251	277	0.95
2	14	1.4	1.2e+02	4.2	1.0	3	23	350	370	349	370	0.96
3	14	1.4	1.2e+02	4.2	0.1	1	23	374	396	374	396	0.89
4	14	0.014	1.2	10.5	1.2	1	23	401	424	401	424	0.94
5	14	7.2	6e+02	2.0	3.5	2	23	431	453	430	453	0.92
6	14	0.0022	0.19	13.0	0.2	2	23	461	483	460	483	0.96
7	14	0.0013	0.11	13.7	5.2	1	23	489	511	489	511	0.98
8	14	0.23	20	6.7	3.0	1	23	724	750	724	750	0.93
9	14	0.0083	0.69	11.3	1.1	2	23	822	843	821	843	0.96
10	14	0.24	20	6.6	0.2	1	23	847	869	847	869	0.97
11	14	0.00091	0.076	14.3	0.5	1	23	874	897	874	897	0.95
12	14	0.0016	0.13	13.5	0.4	2	23	934	956	933	956	0.96
13	14	0.003	0.25	12.6	3.7	1	23	962	984	962	984	0.97
14	14	0.00015	0.013	16.7	0.9	1	23	990	1012	990	1012	0.98

Sequence Information

Coding Sequence: atgatTACTAGTATGACCAGTACAACATGTGCGCCGGGCAACCGTCGTCGAGCAAAAGGTCCTCTATCAGGACATGATTTGCCTTTATATTATTTCGGTGGTGGGAGGTGTTTACGAGAGGAAAATGAAGATGTGGGTGATGCATGGGAACTAGATCCAGCCGATGGCACTTTTAAAACGGAAGTAGTGGTGGAGGAAGAGGTGCCTAAGAAGAATTATAAGAGAAATAAGGAAAACACACAAGAGACTGGACATTTTGAAGATGTAGAGTTTTTAGAAGACGTAGAAGAATTTATCGAAGgtCACGCGGAAATTAGAACAAAGGAAGAACCAAATGATGCAGGTGCTTTGAGCTTCATGGTTGAAGAATTAAACGATGATCCGGACAATGATTTGACACCAGACGTTGATGAAGAGACATCAAAAAGTCCAGGACCATTATTaacggaaagaaaaagaaaatggccgaaaaagaagaaaaagaacgAACTTACAAAGATGTATAAGCAGTACACACAGATCGACTTGCAGAAGGCTATGGACGCTATCAAGTCTAAGAGGATGTCGAGATTAGAAGCTTCGGagttttataatatacctaagaaAACTTTGGCCCATAAACTAGTCCATGAATCAAAGCAAACCAATAAAGATAAGGGCGTTCGCACGCACCATCTCAAACTGGTCGACGAAATCAAGACAATACTAACTTACACAAACGCGACGCCTTTCAAAACGAAAACGGGAAGATATCATTGCGCTTACTGCGGCACAGACGGCCCGCGGTTCGAAGATCCCGATGATCTTCGAGCTCACACTAGAACTAAGCATGCTGATGAAAGAACTAAACACGTGGAACACATAATGAGACCTCCATGGGCGAATGAGGTCCTAAAACTGGATATAGAAGGGCTACATTGTACTGTATGCTGCGTTATAATAACAGCGTGGCCGACATTGTTCACTCATATGCAAGAAAAACACGGTATCGAATTCGAAGAAGCCCAAAACAAAGTCATACCGCATTTATTAAGACGGGAACTGTTGTGTGTTCTTTGCGGCGGATTATTTCCTAGTTACCACCATTTGGATGGTCATATGAATCAGCATTATAGCAGTTATGTATGCACGGTTTGCGGCGATACATTCTTAGCTGAGGTGCGTTTGAAGAAGCACCTGGAAGTGCACAAAACTGGCAAATATCCTTGTGAAGTGTGCGGCAAAGTATACACTTTGGAAAAATACAAGATCAAACATTACAACCACGTGCATAAGCAAGAACGGTCTTTGAAGTGTATGTACTGTTCGGAGAAATTTAACTTGCCGTTTCACAGGCATTTGCATGTCCTTAAAGTACATAAAACTAAGGTTGAGACGATTACGTGCGAGATGTGTGGGAAAGTTTTCACGTGGCAGCCTTACTATTTGGTACATTTGCGGCGGAAACACAGCAGTGAAAGGCACTACAAGTGCAAGTACTGTGATAAACGTTTTCTAAAGAGGTGCGAGTTGAAAGCTCATATGGTTAAACACACTCAGGATAGTAAAGATTTGTATGTTCTAGATCCAGAAGAAGGCACTTTTAAATCAAAAGGAGAAGTAGTGGAAAAGGTCCCTAAGAATAATTACGatacaaataaagaaaacatacaagataataatatgtggaATGTAGATGTGGAGTTTATAAAAGTTGAAGAAGAGTTGACCGAAGaCAAGGTGGATATTGCTAAAACTAAAGTAAAAGATGAACCGAATGATGCAGAACATATAAGCGTGATGGTTGACAGATTAAGCGATGATTCGGACAATGACTGGACGCCGGACGTTGATGAagAGACAGCGCAAAGTCCAGAACCTTTGTTGacggaaagaaaaagaaaatggccgacaaaaaagaaaaagagcgAGCGAACAAAGATGTATAAGCAGTACACACAGGTCGACTTGCAGAAGGCTAAGAAGGCTATCAAGTCTAAGAGGACGTCAAGATTAGAAGCTGCGGAATTTTATAATGTACCTGAGCAAACTTTGGACCGTAAACTAGTCCACGAACCAGATCAAAGCGCCGCAGACGACGCTCGCGCGACCCATCTCAAATTAATCGAAGAAATCAGAACAATACTGACTTACACCAACGCAACACCATTCAAAACAAGAGGGGCAAGATACCACTGTGCTTATTGCGGCACAGGCTGTCCACATTTCGAAGACGCCGATGATCTTCGAGTCCACACTAGAACTAAACACGCAGATGAAAGAATAAAAAACGTGGAACATATAATGAGACCTGCATGGACGAATGCAATCCTAAAGCTGGATATAGAAGGGCTACATTGCTCTGTATGCTGCGAAGTAATTACAGCGTGGCCGAAATTGTTCACTCATATGCAAGAAAAACATGGTATCGAGTTCGAGCAAGCTGAAAACAAAGTGATACCGCATCTATTAAAACGGGACCTGGTCTGTGCTCTCTGCGGCGAATTATTTTCAAACTACCACCATTTGGATGGCCATATGAATCAGCATTACAGCAGTTATGTGTGCTCGGTTTGCGGCGATACATTCTTAGCTGAGTCGCGTTTGAAGACCCATCTGAAAGTACACGAAACGGGCAGATATCCTTGTGAAGAGTGCGGCAAAGTGTTCACTTTGGAAAAGTATAAGATCAAACATTACAAGCTCGTGCATAAGCAAGAGCAGTCCATTAAGTGTAGGTATTGCTCGGAGAAGTTCTCCTGTCTGTATAAAAGGCATTTGCATGTCGTTGAGAAGCATAAAAATAAGGTTCAGGATATTACGTGCGAGATGTGTGGGAAAATATTCACGTGGCGTCCTTACTATATGGTGCATATGCGGCGGAAACACAGTTGTGAAAGGAAATTCAAGTGCGAGTATTGTGAGAAAAGTTTTCTTAGGAATTGTGATTTGAAAGATCATTTGGTGAAGCACACGCGTGCGAAGAATTATGAGTGTGCTGAGTGTAACCAGAAATTTGGGAATCGTCCATCgtttaataaacatttgaaaatgCATGCTGAATCAATTTCATAG
Protein Sequence: MITSMTSTTCAPGNRRRAKGPLSGHDLPLYYFGGGRCLREENEDVGDAWELDPADGTFKTEVVVEEEVPKKNYKRNKENTQETGHFEDVEFLEDVEEFIEGHAEIRTKEEPNDAGALSFMVEELNDDPDNDLTPDVDEETSKSPGPLLTERKRKWPKKKKKNELTKMYKQYTQIDLQKAMDAIKSKRMSRLEASEFYNIPKKTLAHKLVHESKQTNKDKGVRTHHLKLVDEIKTILTYTNATPFKTKTGRYHCAYCGTDGPRFEDPDDLRAHTRTKHADERTKHVEHIMRPPWANEVLKLDIEGLHCTVCCVIITAWPTLFTHMQEKHGIEFEEAQNKVIPHLLRRELLCVLCGGLFPSYHHLDGHMNQHYSSYVCTVCGDTFLAEVRLKKHLEVHKTGKYPCEVCGKVYTLEKYKIKHYNHVHKQERSLKCMYCSEKFNLPFHRHLHVLKVHKTKVETITCEMCGKVFTWQPYYLVHLRRKHSSERHYKCKYCDKRFLKRCELKAHMVKHTQDSKDLYVLDPEEGTFKSKGEVVEKVPKNNYDTNKENIQDNNMWNVDVEFIKVEEELTEDKVDIAKTKVKDEPNDAEHISVMVDRLSDDSDNDWTPDVDEETAQSPEPLLTERKRKWPTKKKKSERTKMYKQYTQVDLQKAKKAIKSKRTSRLEAAEFYNVPEQTLDRKLVHEPDQSAADDARATHLKLIEEIRTILTYTNATPFKTRGARYHCAYCGTGCPHFEDADDLRVHTRTKHADERIKNVEHIMRPAWTNAILKLDIEGLHCSVCCEVITAWPKLFTHMQEKHGIEFEQAENKVIPHLLKRDLVCALCGELFSNYHHLDGHMNQHYSSYVCSVCGDTFLAESRLKTHLKVHETGRYPCEECGKVFTLEKYKIKHYKLVHKQEQSIKCRYCSEKFSCLYKRHLHVVEKHKNKVQDITCEMCGKIFTWRPYYMVHMRRKHSCERKFKCEYCEKSFLRNCDLKDHLVKHTRAKNYECAECNQKFGNRPSFNKHLKMHAESIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00942769;
90% Identity: iTF_00942769;
80% Identity: iTF_00942769;