Basic Information

Insect: Macrosoma leucophasiata
Gene Symbol: -
Assembly: GCA_036365455.1
Location: JAWQUS010000029.1:64734-79905[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00074 0.062 14.5 0.6 1 23 206 228 206 228 0.98

2 12 0.0023 0.19 13.0 0.1 3 23 237 258 235 258 0.94

3 12 7.8 6.5e+02 1.9 2.8 1 23 262 284 262 284 0.95

4 12 0.00036 0.03 15.5 3.4 1 23 289 312 289 312 0.98

5 12 0.067 5.6 8.4 0.5 1 23 316 339 316 339 0.95

6 12 0.019 1.6 10.1 0.3 2 21 359 378 359 383 0.92

7 12 0.53 44 5.6 0.0 3 23 393 413 391 413 0.95

8 12 0.0017 0.14 13.4 0.1 2 23 435 457 434 457 0.96

9 12 0.015 1.2 10.5 6.8 2 23 482 503 482 503 0.97

10 12 0.29 24 6.4 0.7 6 23 513 530 513 530 0.98

11 12 6.4e-06 0.00053 21.1 3.1 1 23 536 558 536 558 0.97

12 12 1e-07 8.7e-06 26.7 0.8 1 23 564 587 564 587 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00074	0.062	14.5	0.6	1	23	206	228	206	228	0.98
2	12	0.0023	0.19	13.0	0.1	3	23	237	258	235	258	0.94
3	12	7.8	6.5e+02	1.9	2.8	1	23	262	284	262	284	0.95
4	12	0.00036	0.03	15.5	3.4	1	23	289	312	289	312	0.98
5	12	0.067	5.6	8.4	0.5	1	23	316	339	316	339	0.95
6	12	0.019	1.6	10.1	0.3	2	21	359	378	359	383	0.92
7	12	0.53	44	5.6	0.0	3	23	393	413	391	413	0.95
8	12	0.0017	0.14	13.4	0.1	2	23	435	457	434	457	0.96
9	12	0.015	1.2	10.5	6.8	2	23	482	503	482	503	0.97
10	12	0.29	24	6.4	0.7	6	23	513	530	513	530	0.98
11	12	6.4e-06	0.00053	21.1	3.1	1	23	536	558	536	558	0.97
12	12	1e-07	8.7e-06	26.7	0.8	1	23	564	587	564	587	0.98

Sequence Information

Coding Sequence: ATGACGGAAAACATATGTATTATGTGTTTATCATTAAAAGTGAGGATGTATGACATCAAAAACACTCATTTACAAGACTTGTATGAAAAACTAACCAATATAAATCTGAAACCATCAGATGCAGCATCAGTGTGCTACATATGTGTAGCCCAGTTAAGGAAGTGTCACAAATTGAAACTGCAGGCTGTGTATGCTGACGTGGTGTTGAAGCTAGCCAGGAATAATGCCCATGAGGCCCAACAGAGCGCGTTGACGGACGAGCACCGAGTGCACCGGCTCGCGCTCGACACGCTGCGGAGTGTCGACATCGAGCCGCGCGCCGACTGCGGGGAGAGCGAACACCCGCCACTCGTAAAGGATGAGCCTTTGAAAAGAGACGACAGCGACAACAATCAGTCAGATGCGGACATCGGTTCGGTGAAACAGCCGACGTCCGACTCGGAGGACGACGTGCCGCTCAATGACATTCGCGTGAACAAGTTGGAGAAATTGAAGAAAGTGAGGAAGAGTGAGAATGGTGTAAAAGTGGACGCTCGAGAGATAATCCTGTCGGAGGAGCAACAACTCGTGGAGATGTTAGCGCGAGCCAAGTCCCACAACTACGTGCACTCGCCCTACAAGTGCGCGCTCTGCTTCAAGGGCTTTGTGGATCCGAGAGCGTATGAGAACCATAAGCAGAGGCACGACGAGCGCTGCGGGGAGCTGGCGTGCGGCGTGTGCGGGCTCCGGTACCGCAGCACGCGCCAGCTGCGGGCGCACGCCGCCACCGCGCACGCGCGCCGCTACGTCTGCAACCGCTGCAGCCACGTCGCCCACACCAAGAACCAAGCGAAGGAGCACGAGAAGTGGCACAACGGGCACACGTACCCCTGCAAGCTGTGCGGACTTAGCTTTAGCAAGTCGACGACGTACCTGACGCACGTGCGCAAGTGTCACGCGAGCGAGTTCGTGTGCACTCGGTGTGGGGACAGCTTCGTGGGTCGCCACGGCCTGCTCATGCACACCGCCAAGATGCACCAAACAGCAGAGGGCACCGACGGCAGTATCGGAGATCAGCCGACCAATGAAGACGCTCGCTGTACAGAGTGCAGTATACAGTTCGCGAGTGTGGACGCGTTCAAGCGACACATCGTCACGTCGCGCAACCACACACACTCTCACGATACTAGCTCAATATGTAAGATATGCGAGGAGACGGTGACGGAGGGCGGCGGCATGGCGGCGCACCTCAAGCGGCACGCGCGGGAGCTTCGCCCCCCGCCACCCCCGGCCCAGCCGCCCGGGGGGACTGCGCCACAACTGCCCTGCGACCAGTGCAGCAGCGTATTCGCGTCGCGGGGGCGGCTGCGCGCGCACTTGCGCCGCGTGCACGCTGCCGGCGGGGGGGCCGCGGGGGCCGGGGGGgccgcggggggcgggggggagCGCACGCGCAGGGACGCCGTGTGCGAACTGTGTGGACATCGCTGTACGTCGCACGCGACCCTCCGCTACCACCAGCGGCGGCACACTGGCGAGCGGCCGCACGCCTGCCCCTGCGGGGCGCGCTTCTTCGCTCGTCACGAGCTGCGCATACACGCGCGCACACACAGCGGCGAGCGGCCCTACGCCTGCGCCCTCTGCCACAAGACCTTCAGCCAGAAGCCGGCGCTCAACCGCCACCATCGCGTCCACACAGGAGTAAAGCCGTACTCGTGCCAACTCTGCGGGAAGTCGTTCAGCCAGTCTAACTCTCTGAAGGTGCACGTGCGCACCGTGCACCTAAAGCATGCGCCGGATATCAAGAAGCCTCCGCAGGACAAACAATGCCAATAA
Protein Sequence: MTENICIMCLSLKVRMYDIKNTHLQDLYEKLTNINLKPSDAASVCYICVAQLRKCHKLKLQAVYADVVLKLARNNAHEAQQSALTDEHRVHRLALDTLRSVDIEPRADCGESEHPPLVKDEPLKRDDSDNNQSDADIGSVKQPTSDSEDDVPLNDIRVNKLEKLKKVRKSENGVKVDAREIILSEEQQLVEMLARAKSHNYVHSPYKCALCFKGFVDPRAYENHKQRHDERCGELACGVCGLRYRSTRQLRAHAATAHARRYVCNRCSHVAHTKNQAKEHEKWHNGHTYPCKLCGLSFSKSTTYLTHVRKCHASEFVCTRCGDSFVGRHGLLMHTAKMHQTAEGTDGSIGDQPTNEDARCTECSIQFASVDAFKRHIVTSRNHTHSHDTSSICKICEETVTEGGGMAAHLKRHARELRPPPPPAQPPGGTAPQLPCDQCSSVFASRGRLRAHLRRVHAAGGGAAGAGGAAGGGGERTRRDAVCELCGHRCTSHATLRYHQRRHTGERPHACPCGARFFARHELRIHARTHSGERPYACALCHKTFSQKPALNRHHRVHTGVKPYSCQLCGKSFSQSNSLKVHVRTVHLKHAPDIKKPPQDKQCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -