Basic Information

Insect: Macrosoma leucophasiata
Gene Symbol: -
Assembly: GCA_036365455.1
Location: JAWQUS010000012.1:6834285-6840021[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.033 2.7 9.4 0.0 1 23 205 227 205 227 0.96

2 10 0.4 34 5.9 0.1 2 20 255 273 254 275 0.93

3 10 0.0011 0.094 14.0 0.5 3 23 298 318 296 318 0.96

4 10 4.6e-06 0.00038 21.5 0.8 1 23 322 344 322 344 0.98

5 10 0.21 18 6.8 0.4 1 23 349 372 349 372 0.91

6 10 0.16 13 7.2 0.4 1 23 378 401 378 401 0.92

7 10 0.00022 0.018 16.2 1.3 1 23 408 431 408 431 0.98

8 10 2.9e-05 0.0024 19.0 3.2 1 23 437 459 437 459 0.98

9 10 2.8e-05 0.0024 19.0 6.4 1 23 465 487 465 487 0.97

10 10 7.6e-07 6.3e-05 24.0 0.9 1 23 493 515 493 515 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.033	2.7	9.4	0.0	1	23	205	227	205	227	0.96
2	10	0.4	34	5.9	0.1	2	20	255	273	254	275	0.93
3	10	0.0011	0.094	14.0	0.5	3	23	298	318	296	318	0.96
4	10	4.6e-06	0.00038	21.5	0.8	1	23	322	344	322	344	0.98
5	10	0.21	18	6.8	0.4	1	23	349	372	349	372	0.91
6	10	0.16	13	7.2	0.4	1	23	378	401	378	401	0.92
7	10	0.00022	0.018	16.2	1.3	1	23	408	431	408	431	0.98
8	10	2.9e-05	0.0024	19.0	3.2	1	23	437	459	437	459	0.98
9	10	2.8e-05	0.0024	19.0	6.4	1	23	465	487	465	487	0.97
10	10	7.6e-07	6.3e-05	24.0	0.9	1	23	493	515	493	515	0.98

Sequence Information

Coding Sequence: ATGGACACCGGGATAATGGTGGAGTCGTTACCTTTACTCGGCGTTTGTAATATGTGTATGAAAGATGGTGCAGTAAAGAGTATGCTGATAAAACACAACTTAGGTAGCACGACTGAGTCTTACACGGATATGCTGTTTAAATGTTTTTCTATTgacGTATCGCTAACAGAACTAGACGACACAAAGAAGTTGATATGTGACGCTTGTATAATCAAGTTGAGGGATTCCCTCCACTTCCGGGAGATGGTGGAGACATCCCTGAAGACTTTGGAAGCCGCTGTGCAGTTGCAAAAAGCTCAAATGCTGGATCTAAAGGAAGAGTCAAATGACATGGATCAAGGATTCGATGACAATGATTCTGaCGACGAATTTCGAGTTAAAGACGAATTTACAACAGACGTCGTGGAGTCTACCAATGAAACTGATGCTATACTCAACGGGATCCTTATAAAAAGCGAGCCAGATGAATACAGACCTCGGCGAAGGAAAAAGAAGACGTTATCGACAAGCAAAAAGAAATCCTACTCCATTAAAAAGATGGTCGACATCGGCGAAACAGAAAAGATGCTCGCATCCGGCTTATTCCCTTTCAAAATTGGCAAGAATCGTACATTCTCATGCGCTGTTTGCCCTGAAAAGTCGTCAGATTTAGATGATATCAAAGCTCATATATCCGACCATAGCTTGGCCAATATACATGTCGCTTTTAAGAAAATGATCACGTCGAATCTCCAGCGTTTTTACAAGTCTACAACTAACTTAAGATGCAAAATATGCGTCAGTGATGTCTCGAATTACGACGAATTGAAACAACATATCGATAACTGCGCCAGATTAAATACATCTTGCTTCAACAAATTACCCTTCAAACTAGAAAAGGACCAACTAGATTGTCCGATTTGCAAGAAAAAATTCCTTAATTTCGTCAGTTTAAACACACATATGAACGAACACTATCCCAATCACGTTTGCGATAGCTGCGGCAAAGCTTTCGCTTCCAAAGCGAGACTACGAGGCCATATGCGGACGCACGAAGTCGGTGACTTTCCCTGTCGATACTGCGATGCTGTTTTCGATAAAGTTACTAAGAGAGAGAATCATGTATCGAAGGAACATAAGTCTGGGATAAGATACGCGTGCAAGAGATGCAATATATCGCTGTCTTCTTTCTATGCACGACAGAAACACTTAGCTGAAGTTCATAATGAGGAATTGAAGAGATATAAATGTAAGGCTTGTACCCAAAGTTACATAACACCGGGTCATCTCTCCAGTCATGTACGTCGAGACCATTTGAATGAAAGAAACCATAAGTGTGATAAATGTGACCTAGCCTTTTATACGAAGAATTCTTTAAAAATGCATATGATTAAGCACGATGGGGAACGGATTCACAGTTGTCATATATGCCAGAAGTCGTATCAAAGGAAAAAGACCCTTAGGGAGCATATGCGTATACATAATAATGATAAGAGATTTGTTTGTCCGGTTTGTGGGAGAGCGTTTACACAGAAATGCACTTTGAAAGGCCATTTGCGGGTGCATGAGAGGAAAGTTGAAGTGGATGATAGGATCCCTCAGCCGTTGCATTCTATATAG
Protein Sequence: MDTGIMVESLPLLGVCNMCMKDGAVKSMLIKHNLGSTTESYTDMLFKCFSIDVSLTELDDTKKLICDACIIKLRDSLHFREMVETSLKTLEAAVQLQKAQMLDLKEESNDMDQGFDDNDSDDEFRVKDEFTTDVVESTNETDAILNGILIKSEPDEYRPRRRKKKTLSTSKKKSYSIKKMVDIGETEKMLASGLFPFKIGKNRTFSCAVCPEKSSDLDDIKAHISDHSLANIHVAFKKMITSNLQRFYKSTTNLRCKICVSDVSNYDELKQHIDNCARLNTSCFNKLPFKLEKDQLDCPICKKKFLNFVSLNTHMNEHYPNHVCDSCGKAFASKARLRGHMRTHEVGDFPCRYCDAVFDKVTKRENHVSKEHKSGIRYACKRCNISLSSFYARQKHLAEVHNEELKRYKCKACTQSYITPGHLSSHVRRDHLNERNHKCDKCDLAFYTKNSLKMHMIKHDGERIHSCHICQKSYQRKKTLREHMRIHNNDKRFVCPVCGRAFTQKCTLKGHLRVHERKVEVDDRIPQPLHSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -