Mleu005227.1
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- ZFY
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000006.1:12690678-12697003[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.046 3.8 8.9 0.0 1 23 177 199 177 199 0.98 2 12 0.084 7 8.1 2.9 1 23 206 228 206 228 0.97 3 12 4.5 3.7e+02 2.7 1.0 1 23 232 255 232 255 0.89 4 12 1.6e-05 0.0013 19.8 1.2 1 23 260 283 260 283 0.92 5 12 0.07 5.8 8.3 2.9 1 23 289 311 289 311 0.96 6 12 1.5e-07 1.2e-05 26.2 2.0 3 23 326 346 324 346 0.97 7 12 0.003 0.25 12.6 1.0 3 23 354 375 353 375 0.90 8 12 0.0019 0.15 13.3 1.4 2 23 388 410 387 410 0.96 9 12 0.078 6.5 8.2 0.5 1 23 417 440 417 440 0.95 10 12 0.054 4.5 8.7 0.0 6 22 451 467 450 469 0.88 11 12 2e-05 0.0016 19.5 0.2 3 23 480 500 479 500 0.97 12 12 6.7e-06 0.00056 21.0 1.5 1 23 505 528 505 528 0.97
Sequence Information
- Coding Sequence
- ATGTCGTCAACAGAACTGTtttcagaaataaatataaaatgtgaaccAGAAGAAGGTACAGATGAAGATAATTCTTATAATCATCAAATAGCAGAGAATTATGTTCATGTAAAGCCGGAGTTCTCATTGGAATATATTCCtgtaaaaattgaattaaataaagttgagtATAATGATCATGAAGAGCAGTGGAATGACGATATGGGCAATGAATTTGGTGCTGAGTGTAAAGAAGAAGATAAAGGTGATATGAATGCAATATCTAATATCATCCAAAAGAAAAGgccacatataaaaaaaaggaggaacAGTGATGATATTGATGAGGACTATGTGCCCCCaaaaaaatctaagaaaaagAAAAAGAAAGAACCAAATGTGAAGCCATCTTTAAAGGGTAAACCAAGAAAAATGAATGGCATTATATACTCTGACGACATAACGAAGCACATAGAGATAGTGACAATAGACGAGCAAGAGCGGCAGATAGAGCATCGCGAGCTGATGAACGGCCGTCGCCACATGCGGTACCAGTGTGAGGACTGCGCCGTGGGGTACGTCGTCATCGAGGCCTACAAGATGCACATGAAGATACATTCTCCGGAAAACGGCGAGCACGAATGCGACTTGTGCCACACCCGCGTGAAGACTGCCGGGGTGCTGTACAGGCACAAGTTGCGGCACTACCGCCGCTACCGCTGCGCGCTGTGCCACACGCGCCACCGGGACAAGGACACTGCGGCCGCGCACGTCATGGACGAACATCTCGGCACCGCTTTCCTCTGTGTGCACTGCGGACGAGGCTTCAAACGTCCACAATACCTGAAACGTCACATAGAGCAGATCCACACGAAGCCGCACAGGTTCGAGTGTCCGGTGTGCCAGCGCGTGTTCCACGAGCGGGGCTGGTACCGGTGTCACGTTAGGAGTCACAACGAAGAAGCCCGCAACAGCACGTCCAAACAGCCAGTGATATGTTCCTACTGCGACCGTTCGTTCAAGAACAAGTCGTACCTCAAGCGGCACCTGCAGCGGCACGAGGGCAGCCCGGCCGCCTTCTGCCCCGACTGCCAGAGGGTCTTCAAGAACGCCGAGGTGCTGAGGGTGCACTGTCGACAGGTTCACAATGCTAATAGGGTCAGTAAAGAGGCGAAGAAAACGCAGTGTAACGTGTGTTTGCGAATCTGTGCGACGCGCGCCATGCTCAACAGACATATACAGCGGATGCATTCCGATAGGACTAAAAAATTCCAATGCGAGTACTGCAAGCGACTGTACCTGACCAAGGGCGAGGTCCGGTCGCACATCATGTGGTCGCACATGTCCCGCACGGGCGGCCACGCGTGCGCCTGCGGCCGCGTGTTCCGCTCGCCCGCGCGGCTCAAGGCACACGCGGCCGCGCGCCACCTGCAGCTGCCGCCGCCCAGGGACAAGGCCTGCCCCGTCTGCCAGAAGACCTTCGCGAACCAGCAAGTCCTGAACCGCCACATAAAAGGTCACTCCGGCGAGACATATCCCTGCAACACCTGCGGCCAGACTTTCAAAACTCAATCCTACGTAAAAGTACACTATAAAATCAAGCATCTCAACATGACTAGGGCAGAAGTGAAGGCTCAGAGCAAACGCAAGTTGCTCATGGTGGATGATGAAGCCATGAACGCCAAGATAAAGGCTAGAAAGTCTAAAGATATGGATCCCTTGGTCGTCGACACTCCGGTGCAGGTGAAGAGTGAGCCCAAGGACGTTGAGGTGCCCGTTTTTGATACATTTGTTGAAATACAAAGGAATTAG
- Protein Sequence
- MSSTELFSEINIKCEPEEGTDEDNSYNHQIAENYVHVKPEFSLEYIPVKIELNKVEYNDHEEQWNDDMGNEFGAECKEEDKGDMNAISNIIQKKRPHIKKRRNSDDIDEDYVPPKKSKKKKKKEPNVKPSLKGKPRKMNGIIYSDDITKHIEIVTIDEQERQIEHRELMNGRRHMRYQCEDCAVGYVVIEAYKMHMKIHSPENGEHECDLCHTRVKTAGVLYRHKLRHYRRYRCALCHTRHRDKDTAAAHVMDEHLGTAFLCVHCGRGFKRPQYLKRHIEQIHTKPHRFECPVCQRVFHERGWYRCHVRSHNEEARNSTSKQPVICSYCDRSFKNKSYLKRHLQRHEGSPAAFCPDCQRVFKNAEVLRVHCRQVHNANRVSKEAKKTQCNVCLRICATRAMLNRHIQRMHSDRTKKFQCEYCKRLYLTKGEVRSHIMWSHMSRTGGHACACGRVFRSPARLKAHAAARHLQLPPPRDKACPVCQKTFANQQVLNRHIKGHSGETYPCNTCGQTFKTQSYVKVHYKIKHLNMTRAEVKAQSKRKLLMVDDEAMNAKIKARKSKDMDPLVVDTPVQVKSEPKDVEVPVFDTFVEIQRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -