Basic Information

Insect: Macrosoma leucophasiata
Gene Symbol: -
Assembly: GCA_036365455.1
Location: JAWQUS010000002.1:9052699-9077632[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0013 0.11 13.8 0.4 1 23 137 160 137 160 0.95

2 10 0.43 36 5.9 0.1 1 20 234 253 234 255 0.93

3 10 0.054 4.5 8.7 0.1 6 21 287 302 286 303 0.96

4 10 0.1 8.6 7.8 0.1 3 21 325 343 323 344 0.93

5 10 0.016 1.3 10.4 1.9 1 23 356 378 356 378 0.98

6 10 2.2e-07 1.8e-05 25.7 0.8 1 23 385 407 385 407 0.98

7 10 0.00077 0.064 14.5 0.2 1 23 413 435 413 435 0.98

8 10 0.0082 0.68 11.3 0.0 1 23 441 463 441 463 0.95

9 10 7.5e-06 0.00063 20.8 0.1 1 23 469 491 469 491 0.98

10 10 6.7e-06 0.00055 21.0 1.0 1 23 497 520 497 520 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0013	0.11	13.8	0.4	1	23	137	160	137	160	0.95
2	10	0.43	36	5.9	0.1	1	20	234	253	234	255	0.93
3	10	0.054	4.5	8.7	0.1	6	21	287	302	286	303	0.96
4	10	0.1	8.6	7.8	0.1	3	21	325	343	323	344	0.93
5	10	0.016	1.3	10.4	1.9	1	23	356	378	356	378	0.98
6	10	2.2e-07	1.8e-05	25.7	0.8	1	23	385	407	385	407	0.98
7	10	0.00077	0.064	14.5	0.2	1	23	413	435	413	435	0.98
8	10	0.0082	0.68	11.3	0.0	1	23	441	463	441	463	0.95
9	10	7.5e-06	0.00063	20.8	0.1	1	23	469	491	469	491	0.98
10	10	6.7e-06	0.00055	21.0	1.0	1	23	497	520	497	520	0.96

Sequence Information

Coding Sequence: ATGATGTTTGATCCACCTGATTTTCCTTACAAAGACCTGGCCGAGTCTTTAAAAGAGCAGTATGGTTCAGATGACATCTTCAATACCAATACTCTTACTGATTTGAACAGCGGCGAAAAAGATTTAATAGCAGTAACAGAAGAAATCATATCTTCAGTCGAAAACCAGTTGTCTTTCAATACGGATGCTCCTGGTACTTGTATTAATCTGGAAAATGCATTTTTTGACATCTCCCACCACGTCGACCCAAACACGGAACTCTACGTGGTGCAATCCGATAATTTGCTCAACAACGAATCCATGCTCTTAGATGAGAACACAGTGAACCAGTTTTTGTTGCCGCTTCAAGTTTCTTCAGACCAAAATCTGCTTGATTCCGCGAACAATGGGCCGGACTTATTAGCTTTGCACTCGTGTGTCATCTGCCATGAAATATTCACTACAGAGGCCGATCTTCTCGATCACACCATATCTGCACACGCTTCCGTTTCCCTTGATGAAAATCAAAATTTGTTACCGCTCGGACAAAATGATTTTGACGAGAAGAACAATGGCGAAACTTTTGAGACGGAGTGGCTGGTCTGTGGTGTTTGCGAGCGAGTTCTATCGACAGCTCTAGAAAATGAACCCAATGAACAACTTTGCTGCAATGACGGCAATGGCAAAAGTCGTATGATGACCAGAAAACTAAGTACGATGTTCGTGTGTGATTTCTGCACTTACCTATTCGCGGATGGGGAATCACTGGATAGGCATAAGCTCATTTGCTACGGCCCCGAGGAACAAATATATTGTCAGACCAACCCAGTGGAGGAGACGAATCCAGCCAGACCGTTTCGACCGGAATATCCGTGCGCTTGTGGAAAACAGTGTTCCTCTGCTGAAGATTTAAAGGTTCACACACGAGAGTGTCAACCGTCCAAAGGCCAACGTCGGCCGTACTCCACACACAACAGCAATAAGATGTGGAACTGTGGCTCTTGTAACCAGCTTTTTGTCACAGCCagAGAACTCTATCGCCATAAGAGAGGCGAAGATAGACCGCCGGGTGCCCCCCTCATGGCCTACGTGTGCGAAGTATGCGACAAGGTTCTGGGCAGCATGTGCGCTttgcacacacacaaaaaaatgcACAAAGTCTCCAAACCCGGTTACCCGTGCCGCGTGTGTGGCCGTCGTTTCAACCAGTCAGGTCATTTAGCTATTCATATGCGCATGCATACCGGAGAGCGGCCTTACCCTTGTGATCTCTGCCCAAAGgcttttaaagtcaagGTGGAGCGCGACGACCATCGGCGGACGCACACCGGGGAGCGGCCCTTCGCGTGCGCCGCCTGCCCGAAGACGTTCACTGCCGCCGCACGCTTGCGTGAACACGCACGCATACACACCGACCAAAGACCGTACAAGTGTGAGATTTGTGGTGCAGCGTTCAGAAGACCTTACGCGCGGACTGTACACATGCTTATACACACAGGGGAAAAACCGCACGACTGTGATATTTGTGGCACCGCTTTCAGGCGTTCCGGTGATATGTGGAAGCACAAAAGAACTTTACACGGCGCTCAAACTGCCGGCGATTCCGAATTCAAACAAGACTGA
Protein Sequence: MMFDPPDFPYKDLAESLKEQYGSDDIFNTNTLTDLNSGEKDLIAVTEEIISSVENQLSFNTDAPGTCINLENAFFDISHHVDPNTELYVVQSDNLLNNESMLLDENTVNQFLLPLQVSSDQNLLDSANNGPDLLALHSCVICHEIFTTEADLLDHTISAHASVSLDENQNLLPLGQNDFDEKNNGETFETEWLVCGVCERVLSTALENEPNEQLCCNDGNGKSRMMTRKLSTMFVCDFCTYLFADGESLDRHKLICYGPEEQIYCQTNPVEETNPARPFRPEYPCACGKQCSSAEDLKVHTRECQPSKGQRRPYSTHNSNKMWNCGSCNQLFVTARELYRHKRGEDRPPGAPLMAYVCEVCDKVLGSMCALHTHKKMHKVSKPGYPCRVCGRRFNQSGHLAIHMRMHTGERPYPCDLCPKAFKVKVERDDHRRTHTGERPFACAACPKTFTAAARLREHARIHTDQRPYKCEICGAAFRRPYARTVHMLIHTGEKPHDCDICGTAFRRSGDMWKHKRTLHGAQTAGDSEFKQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -