Basic Information

Insect: Macrosoma leucophasiata
Gene Symbol: -
Assembly: GCA_036365455.1
Location: JAWQUS010000009.1:13571434-13582138[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0063 0.53 11.6 0.8 2 23 217 239 216 239 0.95

2 12 7.9 6.6e+02 1.9 0.4 6 23 249 266 247 266 0.92

3 12 0.032 2.7 9.4 0.4 5 23 295 314 294 314 0.90

4 12 0.44 37 5.8 0.2 5 23 323 341 321 341 0.94

5 12 0.0074 0.62 11.4 0.1 2 23 348 369 347 369 0.97

6 12 1.7e-06 0.00014 22.8 1.4 1 23 377 399 377 399 0.99

7 12 6.4e-05 0.0053 17.9 0.2 1 23 408 431 408 431 0.98

8 12 0.00019 0.016 16.4 0.3 1 23 437 459 437 459 0.97

9 12 2.3e-07 1.9e-05 25.6 3.8 1 23 465 487 465 487 0.98

10 12 0.00047 0.039 15.2 0.6 1 23 492 514 492 514 0.97

11 12 3.4e-06 0.00029 21.9 4.2 1 23 520 542 520 542 0.97

12 12 0.00015 0.012 16.7 0.9 2 23 549 571 548 571 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0063	0.53	11.6	0.8	2	23	217	239	216	239	0.95
2	12	7.9	6.6e+02	1.9	0.4	6	23	249	266	247	266	0.92
3	12	0.032	2.7	9.4	0.4	5	23	295	314	294	314	0.90
4	12	0.44	37	5.8	0.2	5	23	323	341	321	341	0.94
5	12	0.0074	0.62	11.4	0.1	2	23	348	369	347	369	0.97
6	12	1.7e-06	0.00014	22.8	1.4	1	23	377	399	377	399	0.99
7	12	6.4e-05	0.0053	17.9	0.2	1	23	408	431	408	431	0.98
8	12	0.00019	0.016	16.4	0.3	1	23	437	459	437	459	0.97
9	12	2.3e-07	1.9e-05	25.6	3.8	1	23	465	487	465	487	0.98
10	12	0.00047	0.039	15.2	0.6	1	23	492	514	492	514	0.97
11	12	3.4e-06	0.00029	21.9	4.2	1	23	520	542	520	542	0.97
12	12	0.00015	0.012	16.7	0.9	2	23	549	571	548	571	0.95

Sequence Information

Coding Sequence: ATGGCTATGAATGTAAAAGATCTGTGTAGGCTTTGTGGAAAAAAGGACGAATTTGCTAAAGATTTGATGGACGATAGCAATAAAAGtgtgttaaaaataatacatgaaTTTATGCAGATAATGATAAGCAATAGTGACAACATGCCAACAAAAGTTTGCTTAAATTGTGAAGAAAGAATTGTTTCATTTCAACTATTTATATTGGAATGTTACAATGTACAAGAAACATTGAGGGATGTGTGTTTATTACACAATGAAAATATACCCATTAAATTAGAAGCAGAAATTATGTCACTCAggattgaaaatattaaagcaGAGGTTAAAAATGAACTTACTGCTGAAGACATTGTATCTGCCATAAACAATGAAGCATCAGTATCGGAATATGTAACAAATAATTGCAATGTAGTTGGCCATAACATGGATGATGATACTATAGATGACCACAATAATGATATTAAAAGTGATGATGATCacaataatgatgatgatgattatgatagTGATGTAAGTGATGTAAACCTTGCACTTTTGAAGGAgtcaaagaaaaaatattccagACAAGAAATTAGCGAAGAACACGCGGTTCAGTTAGAAAAAATTCTAAAAGAACCCAATGTGAAAGCAAAGGATCTTGTCAAATTGCAGTGTCATATTTGCGAACAAGCTATTAATACTTGGAAAGGCTTGCGTATACATTATTCTAAACGTCACAGAGCCAAACCAGTTTTATTCTGTACGTGTGGCTTTATTATAACTTCTAGAACTATGCTCTATAAACATGTGGCACAACATAAAGCAGAGAGTAAAACATTGCAAAATCGCGAAGATGCAGAAAATATACGAGATccaaatttcaaaatacatgACTTTGTtgaCTTTTGTGACAAGCagtttcaaagttggtatagtTTAAAATCACACAGTGAATCAAGGCATAAGGTGAAGCCTACAGTTAAATGCATTTGTGGAGCTGTTATCAAATCAaaaacttcattatataaaCATGTTCAAGACCATAAAAATCCTAATGTATTAACATGTGATAAATGTCCACGTATAGCAAAGTCATTGGCTGCATATAATAAACATATACTGCGGCACGTACCCAAATCCGAGCGTCAGTTCAAGTGTTCTTCCtgtgataaaatatttaattccaaAGATGCATTGAAATCACATATAAAATCCCACATACCCatagaagaaagaaaaatatatcgaTGTGATGTATGCGACTTAAAATTCACGACTAGGTCATCGGCGGCAGCCCACAAGCGCGTGGTGCACGAGAAGATCAAGAGCTACGTGTGCGACCAGTGCGGGTATGCGTGCGGCACCAACGGCGAGCTGCGGCAACATCGAGCCATACACAGCGACGACAAGCCTTTCGTCTGCAAGAAGTGTTCCAAATCGTTTAAAACATATTCTAATTTGAAGACGCACATGGACACACACGAAGACACCTCATACGCGTGTTACGTGTGCAACCGCGTGCTGAACAGTCGACGGACTCTTCGTAAACATCTGTTGGTCCACGAAGACAAATGCAGACATGTTTGCTCCTACTGCAACAAAGCGTTTAAGCGGAGACAGACCCTGAAGGTGCATATGTATACTCACACGGGTCACAAGCCGCTGACTTGCAAGTGGTGTAACGAGAGATTCGCGTACGCCTCCACCCTGCGCTCGCATCGTCTACGGTACCACCCAGACCACATGGCGGCGGCACCACACTACGCACACTATAGCGAACAAGATAATATCGATGAGGATTACAGCAACGACAACGTCGAAACTTCAGATCCATCAAAAAATGAAATAGGAGCTATGTGA
Protein Sequence: MAMNVKDLCRLCGKKDEFAKDLMDDSNKSVLKIIHEFMQIMISNSDNMPTKVCLNCEERIVSFQLFILECYNVQETLRDVCLLHNENIPIKLEAEIMSLRIENIKAEVKNELTAEDIVSAINNEASVSEYVTNNCNVVGHNMDDDTIDDHNNDIKSDDDHNNDDDDYDSDVSDVNLALLKESKKKYSRQEISEEHAVQLEKILKEPNVKAKDLVKLQCHICEQAINTWKGLRIHYSKRHRAKPVLFCTCGFIITSRTMLYKHVAQHKAESKTLQNREDAENIRDPNFKIHDFVDFCDKQFQSWYSLKSHSESRHKVKPTVKCICGAVIKSKTSLYKHVQDHKNPNVLTCDKCPRIAKSLAAYNKHILRHVPKSERQFKCSSCDKIFNSKDALKSHIKSHIPIEERKIYRCDVCDLKFTTRSSAAAHKRVVHEKIKSYVCDQCGYACGTNGELRQHRAIHSDDKPFVCKKCSKSFKTYSNLKTHMDTHEDTSYACYVCNRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGHKPLTCKWCNERFAYASTLRSHRLRYHPDHMAAAPHYAHYSEQDNIDEDYSNDNVETSDPSKNEIGAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -