Mleu016914.1
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- ZFY
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000020.1:614553-615965[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.014 1.2 10.5 0.1 2 23 151 172 150 172 0.97 2 11 1.3e-05 0.0011 20.1 2.2 1 23 178 201 178 201 0.97 3 11 8.6e-05 0.0071 17.5 0.3 1 23 208 230 208 230 0.98 4 11 1.1e-05 0.00089 20.3 2.5 1 23 236 258 236 258 0.99 5 11 5.3e-06 0.00044 21.3 0.3 1 23 264 286 264 286 0.97 6 11 3.2e-05 0.0026 18.9 0.6 1 23 292 314 292 314 0.97 7 11 5.9e-06 0.00049 21.2 0.2 3 23 322 343 321 343 0.97 8 11 0.032 2.7 9.4 0.3 2 23 349 367 348 367 0.84 9 11 0.0011 0.09 14.0 0.7 1 23 373 396 373 396 0.94 10 11 0.035 2.9 9.3 0.4 1 23 402 427 402 427 0.93 11 11 2.6e-05 0.0022 19.1 2.8 1 23 433 456 433 456 0.98
Sequence Information
- Coding Sequence
- ATGGAATCTTCAATATGCCGAGTTTGCCTGGAAAAGATGGGCAGCGTCTCAATTTTCGATACGGAGGGTGATAATATAAAGTATAGCGCTAAAATTATGCGGTGCGTTGGTTTGGTAATTGATGAAAACGACGAACTACCCAAGAATATATGCGGCACTTGTGTTTGGGAGCTATCTTTGGCATACCAGTTCGTGCTCAAATGCGAAGCTTCAGATAAAACGCTCAGGTGCTTGAAAACACCGGACCTAGATCTAGAATCGAAAGACCTAGATATTAAAGGTGAATTCATTAAACACCAATTTCAcgacgatatatttgataataatttCTTATTGGACACTAGTCAATACTCAGATCCTGAATGCGAGAGTAAAATTATACGTGAAAGTGAAGATGTCAAAAATGAGTGTAAAGAGgggaagaaaaagaaaaacaggtTGGGACCTATGCAATGTGTTCGCTGTGGCCTGTTGGCCAAGAGTCCATCGGCTTTGGACACTCACATGCGTATCCATACAGGTGAAAAACCCTTCCAATGCTCATCATGTGATACAAAATTCTCTACTAAGGGTGGTCTGAAAAGACACACAGAAACATTCCATACTCAAAGAGTACGTACATTTATGTGTGAGACATGCGGGAACAGTTTCTTTAGAAAAAATGATATTATTGCTCATATCAGAGTGCATACTGGGGAGAAACCGTATGTGTGTTCATTTTGTTCAAAGAGATTTGGACAGATCACATCGTTGAGGAGACATCAACGAACACACACAGGGGAAAAGCCTTATGCTTGTCCCATTTGTGATAAAAAGTTTGCAGATAAGAATTTAGTTAAAAAACATCAATATGTTCATAGCGATGAAAAACACTTCAGTTGCCTCTTGTgtaataaatctgtaaaaacaAAAACCGCACTGAACGTACATATGAATCTTCACAAGAATGAAAAGAAGAATATTTGTAGCTTCTGTGGCATGGCTTTTTCTGTTAAAGGAAACTTACAGACGCATATACGAAGGATTCACTCAGAGAAATCCGGACAATGTTCTGTCTGTTTAAAAACATTCCCCGATCTAGAGGTCCATATGAGGAAACATACTGGAGAGAAACCGTTTGTGTGTACTGTATGTAATGCGGCATTCAGTGCCAAACGGAGCCTGGCACACCACATATTATTCAAACATGAGAACGCTTCCAAGTTTAGATGTTCGATAGGAGATTGCTCTAAAACATTTCCAACGGTAACAATGCTGGAGTTCCATCTTCTGAAACAGCATACTAACCACACACCATATGTCTGCCAACACTGTTCCAGAGGTTTCTTCCGCACTAGTGACCTTTCAAGACATCTCCGTGTGAGCCATATGGACATACCTATAAAAGGATCGTTGAAGACGCTCATTCAATAA
- Protein Sequence
- MESSICRVCLEKMGSVSIFDTEGDNIKYSAKIMRCVGLVIDENDELPKNICGTCVWELSLAYQFVLKCEASDKTLRCLKTPDLDLESKDLDIKGEFIKHQFHDDIFDNNFLLDTSQYSDPECESKIIRESEDVKNECKEGKKKKNRLGPMQCVRCGLLAKSPSALDTHMRIHTGEKPFQCSSCDTKFSTKGGLKRHTETFHTQRVRTFMCETCGNSFFRKNDIIAHIRVHTGEKPYVCSFCSKRFGQITSLRRHQRTHTGEKPYACPICDKKFADKNLVKKHQYVHSDEKHFSCLLCNKSVKTKTALNVHMNLHKNEKKNICSFCGMAFSVKGNLQTHIRRIHSEKSGQCSVCLKTFPDLEVHMRKHTGEKPFVCTVCNAAFSAKRSLAHHILFKHENASKFRCSIGDCSKTFPTVTMLEFHLLKQHTNHTPYVCQHCSRGFFRTSDLSRHLRVSHMDIPIKGSLKTLIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -