Mleu025083.2
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- zfy1
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000029.1:3279822-3292946[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0054 0.45 11.8 1.8 1 23 59 81 59 81 0.98 2 14 0.00038 0.032 15.5 1.9 1 23 85 108 85 108 0.94 3 14 2.1 1.7e+02 3.7 0.7 1 23 115 137 115 137 0.90 4 14 2.8e-05 0.0023 19.0 1.4 2 23 142 164 141 164 0.96 5 14 6.7e-06 0.00056 21.0 1.4 1 23 170 192 170 192 0.97 6 14 0.0071 0.59 11.5 2.3 3 21 207 225 206 230 0.93 7 14 0.0018 0.15 13.4 0.2 1 23 238 261 238 261 0.92 8 14 0.00056 0.046 14.9 0.3 1 23 266 289 266 289 0.94 9 14 8.1e-07 6.8e-05 23.9 2.4 3 23 298 318 297 318 0.98 10 14 5.1e-06 0.00042 21.4 1.8 1 21 324 344 324 345 0.96 11 14 5.1e-06 0.00042 21.4 1.8 1 21 446 466 446 467 0.96 12 14 5.1e-06 0.00042 21.4 1.8 1 21 568 588 568 589 0.96 13 14 5.1e-06 0.00042 21.4 1.8 1 21 609 629 609 630 0.96 14 14 5.1e-06 0.00042 21.4 1.8 1 21 731 751 731 752 0.96
Sequence Information
- Coding Sequence
- ATGATCACATTGGACTTGACATACGAGGAGATGCTAGCAGATCGGCAGAGGGAGTCGACTCGCGCGAGTTACTTGCGCGGCGAGCACAAGTGTACAAGTTGCTTGCTCGCCTTCGACTGTAGCAAGTCGCTCAGCGCTCATTTGGCTGCTAAACATTCACCGGATATCGGCGAATACTGCTGTCCGATATGCAAGACTGTGGTCGCTACGGTGGACACGTTCACGACTCATTACAAGCGGCATATGAGAAGATACGAGTGCAATATTTGCGGTAAAAGAACAACGGATAAGAAATGTATGCAGCAACACTATTTAGCGGCGCACGGTATATCTCTGAAGAACTACATCTGCACGCTCTGCGGCACTGTGTCTGATTCTATAGACACGCACCGCTACCACATGGACTCGCACAAGGCTCGGGTGCAGTGCAAGGACTGTGAGAAAACATTCAGCCACCGCGGCGGCCTCATGACCCATAGACTTTCAGTGCACGAGTGTAAGAACAGATTCCCATGTAATGCTTGCGACAAAGTTTTTCGATACAAGACCAGTTTGAAGAGGCACCTCGAGAAACACGATTCTAAGGAAAAATCAGCTGCGGCCGGCGGCGACGCGTATTGCGGGATGTGCGACATACGTTTTTCGTCCGTCTGCTCCCTCAAGCGGCATCTCAGGAACAGTTTGAAACATGTCACGCACGATCAACTCAAATTTATATGCGACCCGTGCGGCCGGAGGTTTGCGGACAAGACTAAATTGAGAGACCACATAGAAGAGAAACACCTACACAGGACCTTTCTCTGTCTTATATGCAATAAGACATCTAAGAACAGGGTGGGTCTGGAGCAACACATCCGCAACGTGCACAAGGGTCGCCCCAACAACAAAATATGTCACCACTGTGGCAAGGGGTTCCCTACCAAAGTGCAGTTGGAGTCGCACATCCGCACGCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGTCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCTCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCGCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACTGCCCCACCACCTTCTCCCAGCAGTCCAACCTCTACAAGCACCACCGGCAGGTCCGTACACCGCCCCCCCACACCCCCACGCCCGCACCCACACGGGCGAGCGGCCCTACATCTGCGAGTACATCTAAATATAAAGACAAAGAGATATCCGGCGTGTAAGAAAAGGAAAGAAGACCTGCCACCGCCGCCGCCCAATCAGGACTTTGTACCCATTATACAGTACATGCCGGAAGCTGTGTTTGGAATGTGA
- Protein Sequence
- MITLDLTYEEMLADRQRESTRASYLRGEHKCTSCLLAFDCSKSLSAHLAAKHSPDIGEYCCPICKTVVATVDTFTTHYKRHMRRYECNICGKRTTDKKCMQQHYLAAHGISLKNYICTLCGTVSDSIDTHRYHMDSHKARVQCKDCEKTFSHRGGLMTHRLSVHECKNRFPCNACDKVFRYKTSLKRHLEKHDSKEKSAAAGGDAYCGMCDIRFSSVCSLKRHLRNSLKHVTHDQLKFICDPCGRRFADKTKLRDHIEEKHLHRTFLCLICNKTSKNRVGLEQHIRNVHKGRPNNKICHHCGKGFPTKVQLESHIRTHTGERPYICEYCPTTFSQQSNLYKHHRQVRTPPPHTPTPAPTRASGPTSASTVPPPSPSSPTSTSTTGRSVHRPPTPPRPHPHGRAALHLRVLPHHLLPAVQPLQAPPAGPYTAPPHPHARTHTGERPYICEYCPTTFSQQSNLYKHHRQVRTPPPHTPTPAPTRASGPTSASTAPPPSPSSPTSTSTTGRSVHRPPTPPRPHPHGRAALHLRVLRHHLLPAVQPLQAPPAGPYTAPPHPHARTHTGERPYICEYCPTTFSQQSNLYKHHRQVRTPPPPHPHARTHTGERPYICEYCPTTFSQQSNLYKHHRQVRTPPPHTPTPAPTRASGPTSASTAPPPSPSSPTSTSTTGRSVHRPPTPPRPHPHGRAALHLRVLPHHLLPAVQPLQAPPAGPYTAPPHPHARTHTGERPYICEYCPTTFSQQSNLYKHHRQVRTPPPHTPTPAPTRASGPTSASTAPPPSPSSPTSTSTTGRSVHRPPTPPRPHPHGRAALHLRVHLNIKTKRYPACKKRKEDLPPPPPNQDFVPIIQYMPEAVFGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -