Basic Information

Insect: Macrosoma leucophasiata
Gene Symbol: -
Assembly: GCA_036365455.1
Location: JAWQUS010000022.1:9018783-9024695[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00053 0.044 15.0 2.1 2 23 200 221 199 221 0.97

2 14 9.6e-05 0.008 17.3 0.2 1 23 227 250 227 250 0.97

3 14 5.8e-06 0.00048 21.2 0.1 1 23 256 278 256 278 0.98

4 14 1.3e-05 0.0011 20.0 5.8 1 23 283 305 283 305 0.99

5 14 7.4e-06 0.00061 20.8 4.9 1 23 311 333 311 333 0.98

6 14 8.2e-07 6.9e-05 23.8 1.1 1 23 339 362 339 362 0.95

7 14 1.4e-05 0.0011 20.0 3.3 1 23 368 390 368 390 0.97

8 14 3.9e-05 0.0033 18.6 0.7 1 23 396 418 396 418 0.98

9 14 0.00022 0.019 16.2 1.6 1 23 424 446 424 446 0.99

10 14 1.5e-07 1.3e-05 26.1 0.7 1 23 452 474 452 474 0.98

11 14 8.9e-06 0.00074 20.6 2.7 1 23 480 502 480 502 0.98

12 14 0.071 5.9 8.3 2.8 1 23 508 527 508 527 0.95

13 14 9.8e-07 8.1e-05 23.6 0.8 1 23 533 555 533 555 0.98

14 14 3.9e-05 0.0032 18.6 4.0 1 23 561 583 561 583 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00053	0.044	15.0	2.1	2	23	200	221	199	221	0.97
2	14	9.6e-05	0.008	17.3	0.2	1	23	227	250	227	250	0.97
3	14	5.8e-06	0.00048	21.2	0.1	1	23	256	278	256	278	0.98
4	14	1.3e-05	0.0011	20.0	5.8	1	23	283	305	283	305	0.99
5	14	7.4e-06	0.00061	20.8	4.9	1	23	311	333	311	333	0.98
6	14	8.2e-07	6.9e-05	23.8	1.1	1	23	339	362	339	362	0.95
7	14	1.4e-05	0.0011	20.0	3.3	1	23	368	390	368	390	0.97
8	14	3.9e-05	0.0033	18.6	0.7	1	23	396	418	396	418	0.98
9	14	0.00022	0.019	16.2	1.6	1	23	424	446	424	446	0.99
10	14	1.5e-07	1.3e-05	26.1	0.7	1	23	452	474	452	474	0.98
11	14	8.9e-06	0.00074	20.6	2.7	1	23	480	502	480	502	0.98
12	14	0.071	5.9	8.3	2.8	1	23	508	527	508	527	0.95
13	14	9.8e-07	8.1e-05	23.6	0.8	1	23	533	555	533	555	0.98
14	14	3.9e-05	0.0032	18.6	4.0	1	23	561	583	561	583	0.98

Sequence Information

Coding Sequence: atgTCGGATATCTGGAATATTAACGATATATGCCGTTGTTGTCATTCACAAGGCACGTTCAAAAATCTATGTGTGGCATATCCGCATAATGGCAAGGAGGAAATATATTCTATTATGCTACGAGAAACTTTCAACATTATCatCACTCCTCCATCAAAAGACCCCAACATGACATACACCATATGTGAAGTATGCATACCCAGGTTAAGAGATGCCGAGCTGTTTAAACAGCAAGTTGTGTCATGTGAGCAAACATTCAACCAGTATTACAAAAGTTGTATGGTCAAAGATCCATACAAAGTTAAAGAGGAATTTGACGTCTGCTTTGAGAaTTTCAAGACTGAAGGCGCTGATGATGGCAGCGAAGCAAGACTGGAAACTAAATCTGATGGTGGGCCATACAAATCTCTACCTCTTAAACACAAAATGAACTTGTTCCCAGATAGAAAATCACCGTTGAGCCATGAAGACCTCGATGACCAGCCATTATCCACTCTGAGGAGCCACGACTCCGCTCCTGATGCTGACTGGACCGTACGACAAGACAGCGATGAAGAAGACTCGAGACCACTCCGCCAGGCGAAAATCAAGAAATTGTCCTGTCAAGTATGCTGCAAGAAGTTCTCTTACAATGGCTCTCTGGAAGTTCACATGCAGACACACACCGGCGAAAAAACTTACCCATGTCTCATATGCAActtaaaatacgtacaaagcAAAGAACTTATCAAACATATAAACTCGAATCACTCCCAAAACGGCCAATTCCCTTGCACAGTCTGCCCGAAAGTGTTCGATAAGCCGCGACTCCTAAAAAACCACTTGGCAACACACTTCGAAAACAAATTCAAATGCACCCACTGCAGCAAAGAGTTCCAAAGGAAAAAAGGCTTAAAAGAACACATGAAGACACACACTGGTGAAAAGAATTATAGTTGCCACATCTGTAATAAGTCTTTTGGGCATAATCAGACTTTGAAGTCCCATATCCTGACGCATACTGGCGAAAGACCGTACGTTTGCGATGTCTGCGGACGCAGATTTCCTCAGAGAACACATTTGAAAAGGCATATATTTATTATCCACACCGGTGTTAAGCCTCACTCGTGTAAAGTCTGCAATAAAAAGTTCTCAAGCAAGAGTTATTTGGCAATCCATGAAAGACAGCATACAGGGGAGAGACCATATGCCTGTCAAGTCTGTAAAAAAGATTTTACGGCATACACAACGTTAAAAGTGCATATGCGCGTCCACACCGGCCTCAAACCTTATACGTGCAGCTTCTGCGATCGGCAATTCGCCCAGATGGCAAGTTTTAAGTTGCACGAAAGAACTCATACTGGAGAAAGGCCTTTTTCTTGTAAAGTATGCAAGAAGCCTTTTTCCGATAACGGGTATTTGAAAATACATATGCGTGTTCACACTGGCGAGAAGCCTTTTTGCTGTGATGTTTGTAAGCGGGCTTTTAGAGAGACTGGTCAGTTGAAGCGGCATATGCGTGTCCATACAGGAATTAAACCCTATACTTGCAAAATATGTAATAAGCAAATAGCTAATTTATCCAAGCATATGCGAGTCCATTCCGATGAGAGGCCAttcaattgtaatatttgtaataagCAGTTTTCTATAAATGGTAATTTAAAATTGCATATGAGGGTACATACGGGTGAAAGGCCTTATAATTGTGATGTGTGTAGTACCCAATTTACTCAGAGTAGTGGTTTGAAAAGACATAGATGTACGCATATTGGAAACATTGatccgtaa
Protein Sequence: MSDIWNINDICRCCHSQGTFKNLCVAYPHNGKEEIYSIMLRETFNIIITPPSKDPNMTYTICEVCIPRLRDAELFKQQVVSCEQTFNQYYKSCMVKDPYKVKEEFDVCFENFKTEGADDGSEARLETKSDGGPYKSLPLKHKMNLFPDRKSPLSHEDLDDQPLSTLRSHDSAPDADWTVRQDSDEEDSRPLRQAKIKKLSCQVCCKKFSYNGSLEVHMQTHTGEKTYPCLICNLKYVQSKELIKHINSNHSQNGQFPCTVCPKVFDKPRLLKNHLATHFENKFKCTHCSKEFQRKKGLKEHMKTHTGEKNYSCHICNKSFGHNQTLKSHILTHTGERPYVCDVCGRRFPQRTHLKRHIFIIHTGVKPHSCKVCNKKFSSKSYLAIHERQHTGERPYACQVCKKDFTAYTTLKVHMRVHTGLKPYTCSFCDRQFAQMASFKLHERTHTGERPFSCKVCKKPFSDNGYLKIHMRVHTGEKPFCCDVCKRAFRETGQLKRHMRVHTGIKPYTCKICNKQIANLSKHMRVHSDERPFNCNICNKQFSINGNLKLHMRVHTGERPYNCDVCSTQFTQSSGLKRHRCTHIGNIDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -