Mleu011219.2
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- -
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000012.1:6719263-6728421[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.17 14 7.2 0.1 1 23 26 48 26 48 0.97 2 30 0.38 31 6.0 0.1 2 23 73 95 72 95 0.92 3 30 0.00014 0.012 16.8 2.6 1 23 117 139 117 139 0.99 4 30 0.0008 0.067 14.4 5.4 1 21 143 163 143 165 0.95 5 30 0.68 56 5.2 0.1 1 23 170 193 170 193 0.93 6 30 0.11 9.4 7.7 3.0 1 23 199 222 199 222 0.95 7 30 6.4 5.3e+02 2.2 0.1 1 10 228 237 228 240 0.91 8 30 0.18 15 7.0 0.0 1 23 265 287 265 287 0.91 9 30 0.0032 0.27 12.5 1.5 3 23 357 377 355 377 0.96 10 30 0.002 0.16 13.2 1.0 3 23 383 403 382 403 0.97 11 30 0.00014 0.011 16.9 0.8 1 23 410 433 410 433 0.97 12 30 0.0086 0.71 11.2 0.9 1 23 440 463 440 463 0.96 13 30 0.16 13 7.2 2.9 1 23 469 492 469 492 0.96 14 30 0.0028 0.23 12.8 0.5 1 23 498 520 498 520 0.95 15 30 2.2e-06 0.00018 22.5 1.1 1 23 526 548 526 548 0.99 16 30 0.00015 0.013 16.7 4.7 1 23 554 576 554 577 0.96 17 30 0.0035 0.29 12.4 0.2 3 23 690 710 688 710 0.96 18 30 0.33 27 6.2 6.0 1 23 732 754 732 754 0.96 19 30 0.00033 0.027 15.7 4.1 1 23 758 780 758 780 0.98 20 30 0.0076 0.63 11.4 0.1 1 23 785 808 785 808 0.96 21 30 0.002 0.17 13.2 2.0 1 23 814 837 814 837 0.96 22 30 0.014 1.2 10.5 0.0 2 23 941 962 940 962 0.96 23 30 0.14 12 7.4 6.4 1 23 984 1006 984 1006 0.96 24 30 0.0068 0.57 11.5 1.4 1 23 1010 1032 1010 1032 0.98 25 30 0.21 17 6.8 0.1 1 23 1037 1060 1037 1060 0.95 26 30 0.00028 0.024 15.9 0.6 1 23 1066 1089 1066 1089 0.95 27 30 0.0096 0.8 11.1 0.1 1 23 1096 1119 1096 1119 0.95 28 30 0.01 0.87 10.9 4.9 1 23 1125 1147 1125 1147 0.95 29 30 1.6e-06 0.00013 22.9 1.0 1 23 1153 1175 1153 1175 0.99 30 30 2.4e-05 0.002 19.2 2.5 1 23 1181 1203 1181 1204 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAAAAAGCGAACGCTGCTTTCTTTCTGGAGTATTCGAATGCCGTCGCATTTAGATGGGGCCGAGGCAAATTCATGTGCGCATACTGTCCTGGCATATGTGTGGACGTATCAGAATTACGAGTACATTCGCAGGTTCATAACAAACTGGAAATATTCCAAAATCGAGAGGTCCGCAATTCTTTTCCACTTCGCATCGACATAACCGATTTGTCGTGCACCATATGCGGCGAGATGGTGCTGACTATGCCCAATCTTAAGGCTCATTTGCTGCAAAAGCATTCCAAGGCGATTGATCCCGAGTATAACGAAGGCGTAATACCATTCGTATTGACGAATACCGATTATAAATGCGTGCACTGCGGGGCTATGTTTGAACGATTCATGAACCTATTCATGCATATGAACAAGCATTACCAGAGCTATGTATGTCACACGTGCGGCAAGGGTTTCTCAGGGAAGCATAAATTACGCGCTCATCAAATGTGTCACGAATTGGGCAAGTTTTCTTGCAGTAAATGCGCGGATGTATTCCCGAATAGGGTCATGAAAAATCGACACATGGCCGCCGTGCACGGTCCGAAGAAACGATATAGATGTCCGATTTGCGACGTACAATTCGAATCGTGTCATTCACGGCTTGTGCATTTGGATAAGAAGCATGGACAGAAATCTGTGTATAAGTGCAGCTTGTGTCCCGCTGTTTTTGGCAGCGGCACTTCGAGGGACAATGCCTCGATAATTATCGAGTGTTCCAACGGTTGTCCATTCAGATGGACTCGCGGGGCGTACACCTGTGCCATATGTTCAGTCTCTTTCGGAGATTTCGCCGATCTGGCCCTTCACAACGAGGACCATCCGAACAGGATCGAGGCGATGCGAACGGCCAGATCTTGCGATAATGTGAAACTAGAGATAACCAATCTCCGTTGCGAGTTGTGCCTTCTGCCCATGGAAAATTTGGACGCTTTAAAAGACCATCTCATCGACATACACTCGAAACCTATAATGAAGGAATACGGTATCGGCGTGACGCCTTTCTACCTGAAAACTAAGGAGCTAGCTTGCACACACTGCGATGAGAAATTCGAGTTGTTCTCCAAACTGAACATGCACATGAATGAACATTACCCAAACAACATTTGCTTCCATTGCGGCAAAGCGTTCGTTGCGGCCCACAGGCTCAAAGCTCACCAGATTATACACGAGATTTGTACAGACGAATTCAAGTGTAACAAGTGCAACGAAGTCTTCAAGACGCGTGCGCTTAGGAATAATCATTTGATGGTCGCCCACGGTACCTTAAAGTTCAGATACAGATGTCCTTATTGCAACGATTCGTTCAAGAGTTACGCGGACAGAGGTCGTCATTTGAGGGAGAATCACAATCGGAAAGTTGAGTATCCTTGTCACTTGTGTACAGCTGTTTTCGCGATGTGTAATCAACGGACAAAGCATATAAAACAGGTGCACATACGTCAGAAGTCGTTCTTATGTGAGTATTGTTCCTACAAGTCGGTTACTGCGGCCCAATTGAGGAATCACATGGTGAAGCATGGCGGTGAAAAGAAGTTTCAGTGTGAAGTGTGCAAAAAATCTTACGCGAGGTTGAAGACGCTGAGAGAACACATGCGTATACATAACAACGATAAGCGATTTGTTTGCGACTATTGTAATAATGCGTACGTTCAGAAATGTAGTTTACAGAGTCACATGCGAACTCATCACCCTAACGCGGAACCTTTGAAGAAGAgaAAAGAAGCAGTGATTCACATTAAAAAAGAAGAAGCATATACTGAGAATAGCCCAATGAAGCGGGAGCAGACACCAAAGGCTGACGGAAACGCCCGAACAGCTGTTTACAGACGAAACGTCAAGATCATTCTGTCCTGCTCTACAGCGTACCCCTTTAAATACAGGAACGGGATGTATTTATGCTTCTTTTGCAACGATACATTTCTAGAGCCAGATAAGATGCGAGAACATGTCCATCTCAAACACCAGAACATGGTTTTCAGACTGAGTAAATACGAACCTTTGAAATTGGATATAACGAAGACGGCGTGCAAACTGTGCGGTCTAAGCGTTAAAGATTACGCATCGCTCAAATCACATTTGCAAGAACACGGCAAGTGTATTGATACGACGTACGGTGAAACAGTATTGCCGTACAAACTATCTAAAGACGAGCATTGTTGCCAAGTTTGTGGGAAAATTTACGACAAGTTCCTTACTCTGCACAATCATATGAATGAGCATTTCGAGCAATACATCTGTGAAACGTGCGGCAAAATGTTCGTGACTAAACATAGGATGGTGAACCATATGCACACGCACAGACGGGGCAAATTCCCCTGCAAGAAATGCAGCGAAGTCCTCCCGAGTTACGCGTCTCTGTACGCACACATGGCTAAAGTCCACCGCTCGAACAAACGGTACAAGTGTCCGATTTGCGATGAGAAATTCGTGAATTACAAGTGCAGGATGCGGCATTTGGATTCGGTTCATGgaAGAGAAGCAGTGATAGAGATAAAACATGAGGCATCAGACACTGAAAATTGCCCTGTGAAGCGCGCGCAGACAACGAGGGCAGACGGGAACGCCCGAAGAGCTGCTTACAGGCGAAACGTAAAGATCATTCTGTCCTGCTCTACAGCGTACCCCTTTAAATACAGGAAAGGGGCGTACCTATGCTTTTTCTGCAACGATACATTCCTTGAGCCGGACAAGATGCGAGAACATGTTCACCTTCAGCATCAGAATATGATTTTTAAGCCGAGGAAATACGAACCGCTGAAGTTAGATATAACGATGACAGTGTGCAAATTATGCGGTCTTGGCGTCAACGATTACGCATCCCTCAAAGCTCATTTACAAGAACATGGGAAGAGCATAGACACGACCTACGGCGAAACAGTGTTGCCGTACAAACTCAGCAAAGATGAGCACTGTTGTCAAGTATGTGGGAAGACCTATGAGATGTTCTTAACATTACACCGGCATATGAACGAACATTTCGAGCGGTACATCTGTGAGACGTGTGGTAAAATGTTCTTGACGAAGCAGCGGATGGTGAACCATACGCGAACTCACGAACGGGGCGAGTTCCCCTGCAAGACTTGCGGCGAGGTCCTTCTTTCTTACGCTTCGCTCTACGCGCACATATCCAAAGTCCACCGTGCGAATAAGCGATATAAATGTCCGATCTGTGACGAGAAATTCGTGAACTATAAATATAGGATGCGTCACTTGAACGCTGTACACGGAGAGAAGACAGCTTCTTTTCCGTGTCCGTCTTGCGATAAGGTTTTCGACTTGAGCAGCCGTAGAAGCGCCCACATAAGGGCTCAACACCTGCAAGAAAGAAATCACTGTTGTAAAGTTTGTGGGATGAAGTTTTTTACTAACTACGAATTACAGGAGCATTCTATAAAGCACGTCGGAGCAAGAATATACCAGTGCGATGTTTGCAAGAAATCTTACGCCAGGCTGAAAACTTTGCGAGAGCATATGCGTATCCATAATAATGATAGGAGATTTATTTGCCCTGTGTGTGGGCAATCGTTTATACAGAAGTGCAGTTTAAAGCAGCATGCTAAAGTACATCATCCTATGCAAGTGAAGGCCGATGTTTATTAG
- Protein Sequence
- MEEKANAAFFLEYSNAVAFRWGRGKFMCAYCPGICVDVSELRVHSQVHNKLEIFQNREVRNSFPLRIDITDLSCTICGEMVLTMPNLKAHLLQKHSKAIDPEYNEGVIPFVLTNTDYKCVHCGAMFERFMNLFMHMNKHYQSYVCHTCGKGFSGKHKLRAHQMCHELGKFSCSKCADVFPNRVMKNRHMAAVHGPKKRYRCPICDVQFESCHSRLVHLDKKHGQKSVYKCSLCPAVFGSGTSRDNASIIIECSNGCPFRWTRGAYTCAICSVSFGDFADLALHNEDHPNRIEAMRTARSCDNVKLEITNLRCELCLLPMENLDALKDHLIDIHSKPIMKEYGIGVTPFYLKTKELACTHCDEKFELFSKLNMHMNEHYPNNICFHCGKAFVAAHRLKAHQIIHEICTDEFKCNKCNEVFKTRALRNNHLMVAHGTLKFRYRCPYCNDSFKSYADRGRHLRENHNRKVEYPCHLCTAVFAMCNQRTKHIKQVHIRQKSFLCEYCSYKSVTAAQLRNHMVKHGGEKKFQCEVCKKSYARLKTLREHMRIHNNDKRFVCDYCNNAYVQKCSLQSHMRTHHPNAEPLKKRKEAVIHIKKEEAYTENSPMKREQTPKADGNARTAVYRRNVKIILSCSTAYPFKYRNGMYLCFFCNDTFLEPDKMREHVHLKHQNMVFRLSKYEPLKLDITKTACKLCGLSVKDYASLKSHLQEHGKCIDTTYGETVLPYKLSKDEHCCQVCGKIYDKFLTLHNHMNEHFEQYICETCGKMFVTKHRMVNHMHTHRRGKFPCKKCSEVLPSYASLYAHMAKVHRSNKRYKCPICDEKFVNYKCRMRHLDSVHGREAVIEIKHEASDTENCPVKRAQTTRADGNARRAAYRRNVKIILSCSTAYPFKYRKGAYLCFFCNDTFLEPDKMREHVHLQHQNMIFKPRKYEPLKLDITMTVCKLCGLGVNDYASLKAHLQEHGKSIDTTYGETVLPYKLSKDEHCCQVCGKTYEMFLTLHRHMNEHFERYICETCGKMFLTKQRMVNHTRTHERGEFPCKTCGEVLLSYASLYAHISKVHRANKRYKCPICDEKFVNYKYRMRHLNAVHGEKTASFPCPSCDKVFDLSSRRSAHIRAQHLQERNHCCKVCGMKFFTNYELQEHSIKHVGARIYQCDVCKKSYARLKTLREHMRIHNNDRRFICPVCGQSFIQKCSLKQHAKVHHPMQVKADVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -