Mleu011087.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Macrosoma leucophasiata
Gene Symbol
-
Assembly
GCA_036365455.1
Location
JAWQUS010000012.1:6053251-6064829[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 0.29 24 6.4 0.7 1 23 82 105 82 105 0.95
2 39 0.16 14 7.2 0.1 2 23 132 154 131 154 0.94
3 39 0.3 25 6.3 0.0 1 23 202 224 202 224 0.94
4 39 2.5 2.1e+02 3.5 2.2 1 19 229 247 229 249 0.88
5 39 0.0021 0.18 13.1 1.2 2 23 260 282 259 282 0.97
6 39 0.00094 0.078 14.2 0.9 3 23 291 312 289 312 0.95
7 39 0.00016 0.013 16.7 2.3 1 23 318 340 318 340 0.97
8 39 3.7e-06 0.00031 21.8 1.3 1 23 346 368 346 368 0.99
9 39 0.00034 0.029 15.6 3.4 1 23 374 397 374 397 0.97
10 39 0.012 1 10.7 0.8 1 23 479 502 479 502 0.95
11 39 0.069 5.7 8.4 0.3 2 23 529 551 528 551 0.92
12 39 0.067 5.6 8.4 2.6 2 23 574 595 573 596 0.94
13 39 0.0028 0.23 12.7 1.0 1 23 600 622 600 622 0.98
14 39 0.006 0.5 11.7 1.5 1 23 627 650 627 650 0.97
15 39 1.4 1.2e+02 4.2 1.0 2 23 658 680 657 680 0.84
16 39 0.0026 0.22 12.8 3.5 2 23 688 710 688 710 0.97
17 39 8.3e-05 0.0069 17.5 3.1 1 23 716 738 716 738 0.97
18 39 1.7e-05 0.0014 19.7 0.3 1 23 744 766 744 766 0.99
19 39 0.0017 0.15 13.4 4.0 1 23 772 795 772 795 0.96
20 39 0.34 28 6.2 0.5 1 23 863 886 863 886 0.91
21 39 0.27 22 6.5 0.1 3 23 914 934 913 934 0.97
22 39 0.4 33 6.0 0.8 2 23 957 978 956 978 0.95
23 39 4.2 3.5e+02 2.7 0.5 1 14 982 995 982 1000 0.91
24 39 0.05 4.2 8.8 1.4 1 23 1009 1032 1009 1032 0.96
25 39 0.022 1.8 9.9 2.1 1 23 1039 1062 1039 1062 0.95
26 39 0.02 1.7 10.0 0.2 2 23 1070 1092 1069 1092 0.94
27 39 0.0047 0.39 12.0 2.7 1 23 1098 1120 1098 1120 0.97
28 39 0.00012 0.01 17.0 1.4 1 23 1126 1149 1126 1149 0.98
29 39 0.00062 0.052 14.8 1.7 2 23 1156 1178 1155 1178 0.95
30 39 0.89 74 4.9 0.4 3 23 1249 1270 1247 1270 0.90
31 39 3 2.5e+02 3.2 0.1 3 23 1297 1318 1295 1318 0.94
32 39 0.002 0.16 13.2 0.4 2 23 1341 1362 1340 1362 0.97
33 39 0.00085 0.07 14.4 1.6 1 23 1366 1388 1366 1388 0.97
34 39 0.00031 0.026 15.7 2.9 1 23 1393 1416 1393 1416 0.97
35 39 0.11 9.2 7.7 0.7 2 23 1424 1446 1423 1446 0.96
36 39 0.0032 0.26 12.6 2.5 2 23 1454 1476 1453 1476 0.96
37 39 7.4e-05 0.0061 17.7 3.0 1 23 1482 1504 1482 1504 0.98
38 39 3.8e-05 0.0032 18.6 1.0 1 23 1510 1532 1510 1532 0.99
39 39 0.0005 0.042 15.1 4.4 1 23 1538 1561 1538 1561 0.97

Sequence Information

Coding Sequence
atgtattacaataTTTTGGCAAGTAAAGCGTGCTTACACACTTTGGGCGTGGAGAGAGCGCGTGCTCGACGTACCGTCAAAAACAAGGTAAAAGTCGAAGCCACCAATGATGAAAAGACAGAGCTCTCAGAggacacaaataaaacaaaaagaggCACAGACTTGCACAAACACAGAGCGAACATAGTAGAAATGATGAGATGCTCTAACGCAACACCGATACGTTGTCGAGGGGGCATCGGCTACGCATGCTGCTTCTGTTCCAACCAATATCCAAATCCCGCTGACTTGAAGGATCATACTATAAGAGACCACGACGAGAATACGAAGTACGATTTCCTAAAACGAAAGGACATGTACAAATTCCACGTTAAAGTTGATTTGACTACGCTTAAATGCACTCTTTGCGATCTAAAGATCAACACTTACGAGGCGTTGATAGTACACCTGAAGGATGAACACAAAAGGAATGTGTTCACCACTATTAAACACCAGATTCTGCCCTTCAAATTTGAGACGGAGAGTCTCCAGTGTTTCATTTGCATGAACGTCTACCACAAGTTCAAGTCGTTGCTCGAGCATATGAACCTTCATTATAGGAACTACATTTGCGATGTATGCGACGCTGGCTTCGTAACTCGCGGAATTTTAGCTCAACACGCTGAGAGTCACAAGACTGGCGAATTCACCTGTGATTTCTGCGCCAAAGTTTTCAACACCTTCAGGAAGAAACGTTCTCATGAGAAATGCGTCCACACCCACACGTCTTTCCTCAACAAATGCGGCTATTGCAACGAAAAGTTCAAAGATTACCGGAATAAAGAGAAGCATTTGATAACGGTGCACGGTGTGCAGAATTCCGTCCTCAATTGCCAGGCGTGCGATAGAACTTTTAGCAACCAGAAAGAATACAGTATTCACATAAAGAGATCTCATTTGATGGACAAGCGCCATAAATGTACTGAATGCGATATGAGCTTCTTTTCCACGTCCGAATTGACCAATCATATTGTGAAGCACACAGGGTTAAGGAAGTATAAGTGTGAGGTGTGTCACAAAGCATACGGTCGGCCTAAGACTTTAAGGGAGCATATGCGGATCCATGCCGATGATAGAAGGTTTAAATGCGAACACTGTGGACAGGCCTTCGTGCAGAAGTGCAGCTGGCGAGGACATATGCGTGCCAAACATGGTATATCGTCTTTAGACAGCAAAAGAGATCTTGTAAGCGAAGAAAGGAATCAGAAGACATTAAGTGGTATTACCAATATTCATAAATTGAATAAGAATAAAGAACCGATGTCACAAAGACTAGATAATTCAAAGAAAGAATTAGCCAATTTGAAAGATAATTTGAACAAACAATTGGCTAATTTGAAAGAGATACTACAGTGGTCAAATGCAACACCAATTCAAAGACATGGAGGTATAGGATACACCTGCTGTTTCTGTCCTGAACAATTCCCTGAATCTGCCGAATTGAAAGCGCACACCTTAAACAGTCACGATACTGTagccaatattaaaaaaatagcgtGTTATGATACGAAGAGGTTCTACGTTAAACTCGACATAACGGGACTCTACTGCAAGATTTGCGATAGCTCCAGTGACACACACGAAAACTTGCTGTGGCACCTAGAAGAAGTCCACGACAAAGTCGTATACACCAACGTTAAGCAGCAAATCATTCCGTTTAAATTCAACAAGGAGATTTTAACGTGCTTTATTTGTTCAAACGTGTTCAACAAATTCAAATCGCTTTTAGAACACATGAGCTCACACCACTACAATAATTACATTTGCGATGTTTGTGGCTCTGGCTACGTTACCCAAAGCAAATTGCATATTCACAAGAAGTCGCACAAGCAAGGCGTGTTCCCATGCGATAAATGCAAGAAAGAGTTCGATACTAAAGCTAAAAGGAGGCTGCATGAACGACGGGTCCACGCCGGTCGTGTCTTGCTCAACAAATGCGGTTACTGTCAACAGAAGTTCAGGGATATGAGACAGAAGGACATGCACCTCGTGAGGGTTCACGGTGTGACATCAATATCCAGAAAGTGTCAGGCTTGTGATAAGATGTTCCCGCACCAAAACGCATTACTTATTCACATGAAGAGGTGCCATTTAATGGAGCGGACGCACAAGTGCTCGGAGTGCGACAAAGACTTCTTTTCGTTGAGCGAATTAAATCATCACATGGTGGTACATACTGGATCGAAGGAATACAGATGTGAGATTTGTTTGAAAGCGTTCGGAAGGAAATGGACTCTGCGCGAACATATCCGCATACATACTGACGATAGGCGTTACAAATGTGAGCATTGTGGTATGGCGTTTGTCCAAAAATGCAGCTGGAAGAGTCACGTGCAGAATAAACACGGTCCACGTAAAAGTGAGAGAACGGATAAAAAGAGAGTATATCAAACAAAGGAGACTGTCGAAAAGATCGCTATATTAGTGGCGAAGAAGAAGCCGAGTGAGAGGAAGTTGGGGGAAGAATTGGAGAAGCATCGGACGAACATTCGTGAAATGCTGCGGTGGTCGAACGCGACCCCGATTCGGTGTCGCGGTGGCATTGGATATGCGTGTTGCTTTTGCTCCGATCAATTCCCAGACCCTGCTGATTTGAAGAAGCATACGATAGACGTCCACGATGATGCGGCGAAGTCGAAATTTATGAATGGCCGTGACATGTACGGGTACTTCGTCAAACTGGATATAACAGGACTACTTTGTAACATATGCACGTTGAGCATAGACAACTTGGAACAACTGATGGATCATTTAAAAGATCACGGCAAGAAACTGTATACGGACATCAAGAATCATATTCTACCATTCAAATTCGAGAGCGAAACGCTGAGATGTTTTATGTGCATGAACATTTTCAGCAAATTTAAAGCTCTTCAAGAACATATGAATGTGCATTACAGGAACTACGTTTGCAACAGATGCGACGCGGGCTTTGTTAACAAGCACATCTTGTTGTGCCACAGTGAGGGCCACAAGACTGGTGATTTCACCTGCGACCAGTGTTTGAAAGTTTTCAATACGCTTCGTAAGAAGAAGCTCCACGAAAGAGTCGTCCACAGCGGGATGAATATGCCCCACAAGTGCGGTTATTGTAATCAGAGATTCAAAGAGAATTGGAATAAGAATGAACACCTGGCAAAGGTGCACGGAGTTCGCGGCCCGGTGATACCATGTCAAGCTTGCGATAAGACGTTTGACACGCAGCAGGCTTGGCTACTGCATACAAAGCGTGATCATTTGATGCAGAGGCAGCACAAATGCTCGAGATGCGAAATGGCATTCTTCTCGAAGAGGGAACTCAACGATCACATGGTCAAGCACACGGGCTTGAGAGAGTATAGGTGCGAAGTTTGCTTCAAGTCCTATGGAAGGTTGAAGACCTTGAAGGAGCACATACGGAGGCTTCACACTGAGGATAAGACTTTGAAATGCGTGCATTGCGGGGAGTCTTTTATGCAGAGTTACTTTCTGAAGAGTCACTTACTTGTGAAGCATGGAGAAAGATTGGGAAGGATTAAGATCGAAACGAGAACATCAAAACCACGAGTCGAGGTAAAATTCGTTAAGAAAAGAGTACTCCTGTCCCGTTCCCAAAGAGTGACAGGCAAAGCGTCCGAGATTAAGAAGAACGAAGAGAATCTGAGGCATATATTGCTTAATTCCAACGCGAATCCGATCAGATGCAAAGACAGCTTGGGTTATGGTTGTGCTTTTTGTCCAGAACAATTCCAAGAGACTACCAACTTAAAGAAACATTTCCTCGAAGAACACAACAGTGATAGACTGATAAAATTCATGTGCGGTAGGCTTTTCCAGCACGTCGTCAAACTTGACATAACGTACCTAAACTGCGCTCTCTGTGATCAAGATATAGCCAAGATAGAGGATCTCATGATGCACCTCAAAACCCAACACGGCAAAGAAATTCACACTGACATAAAAAGCAAAATTGTCCCTTTTAAGTTCGATACGCCAGAATTACGCTGCGCCGTATGCAGCACCGAGTATACAAATTTCAAACTCTTACAAGCGCACATGAACTCGCATTTCGGCAACCATATTTGCGATATATGCGGTGCTTGTTTCATGACGGAGAGGTTATTGGTTAGTCATATAAAACGGCACGGCACTGGGGAACACAAGTGTGATAGCTGCGAGAAGACGTTTAGCAATCCGCAGAAGCTCAATGAGCATGTCAAACGAACTCATCTCGGTTTGGGCAAGCGAAACAAATGTCAGTTCTGCGACGAGCGATTCGTTGATTACTGGAAGAAGGTGAACCACATGATAAAAGAACACGGAGCACCTCCCGTAGTATTGAAATGTCACGCTTGTGAACGGACCTTCCAAAATCAAAGGGCGTTGGCGAGGCACACGAAAAAAGACCATTTGCTAGAGAGGAAACATAAGTGCGCGGAGTGTGAAATGAGATTCTTTAGCAAGAGCAGTCTGCAAAGACACATGGCTAAACATACAGGATTAAGGCAGTTCAGATGCGATGTATGTTTCAAGGCGTATGGAAGAAAGAATACGCTTAGAGAACACATGCGTATACATGCTGATGATAGACGATTCTCTTGCGTACATTGTGGTCAGGCATTCGTTCAAAAATGTAGCTGGCGGAGCCATATGCGTTCAAAACACGGAGAAGACGTCTAA
Protein Sequence
MYYNILASKACLHTLGVERARARRTVKNKVKVEATNDEKTELSEDTNKTKRGTDLHKHRANIVEMMRCSNATPIRCRGGIGYACCFCSNQYPNPADLKDHTIRDHDENTKYDFLKRKDMYKFHVKVDLTTLKCTLCDLKINTYEALIVHLKDEHKRNVFTTIKHQILPFKFETESLQCFICMNVYHKFKSLLEHMNLHYRNYICDVCDAGFVTRGILAQHAESHKTGEFTCDFCAKVFNTFRKKRSHEKCVHTHTSFLNKCGYCNEKFKDYRNKEKHLITVHGVQNSVLNCQACDRTFSNQKEYSIHIKRSHLMDKRHKCTECDMSFFSTSELTNHIVKHTGLRKYKCEVCHKAYGRPKTLREHMRIHADDRRFKCEHCGQAFVQKCSWRGHMRAKHGISSLDSKRDLVSEERNQKTLSGITNIHKLNKNKEPMSQRLDNSKKELANLKDNLNKQLANLKEILQWSNATPIQRHGGIGYTCCFCPEQFPESAELKAHTLNSHDTVANIKKIACYDTKRFYVKLDITGLYCKICDSSSDTHENLLWHLEEVHDKVVYTNVKQQIIPFKFNKEILTCFICSNVFNKFKSLLEHMSSHHYNNYICDVCGSGYVTQSKLHIHKKSHKQGVFPCDKCKKEFDTKAKRRLHERRVHAGRVLLNKCGYCQQKFRDMRQKDMHLVRVHGVTSISRKCQACDKMFPHQNALLIHMKRCHLMERTHKCSECDKDFFSLSELNHHMVVHTGSKEYRCEICLKAFGRKWTLREHIRIHTDDRRYKCEHCGMAFVQKCSWKSHVQNKHGPRKSERTDKKRVYQTKETVEKIAILVAKKKPSERKLGEELEKHRTNIREMLRWSNATPIRCRGGIGYACCFCSDQFPDPADLKKHTIDVHDDAAKSKFMNGRDMYGYFVKLDITGLLCNICTLSIDNLEQLMDHLKDHGKKLYTDIKNHILPFKFESETLRCFMCMNIFSKFKALQEHMNVHYRNYVCNRCDAGFVNKHILLCHSEGHKTGDFTCDQCLKVFNTLRKKKLHERVVHSGMNMPHKCGYCNQRFKENWNKNEHLAKVHGVRGPVIPCQACDKTFDTQQAWLLHTKRDHLMQRQHKCSRCEMAFFSKRELNDHMVKHTGLREYRCEVCFKSYGRLKTLKEHIRRLHTEDKTLKCVHCGESFMQSYFLKSHLLVKHGERLGRIKIETRTSKPRVEVKFVKKRVLLSRSQRVTGKASEIKKNEENLRHILLNSNANPIRCKDSLGYGCAFCPEQFQETTNLKKHFLEEHNSDRLIKFMCGRLFQHVVKLDITYLNCALCDQDIAKIEDLMMHLKTQHGKEIHTDIKSKIVPFKFDTPELRCAVCSTEYTNFKLLQAHMNSHFGNHICDICGACFMTERLLVSHIKRHGTGEHKCDSCEKTFSNPQKLNEHVKRTHLGLGKRNKCQFCDERFVDYWKKVNHMIKEHGAPPVVLKCHACERTFQNQRALARHTKKDHLLERKHKCAECEMRFFSKSSLQRHMAKHTGLRQFRCDVCFKAYGRKNTLREHMRIHADDRRFSCVHCGQAFVQKCSWRSHMRSKHGEDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-