Mleu024385.1
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- -
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000028.1:4851246-4851626[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-08 1.4e-05 25.5 0.0 12 37 4 29 1 36 0.88 2 2 6.3 3.8e+03 -1.5 0.0 2 10 85 93 84 94 0.82
Sequence Information
- Coding Sequence
- ATGCAAAAAGTGCGACTGAAGGCAATGGGAGTAAACGAAGCGGCACGAACGTACAACATTCCTTCCAGAACGCTAAGGCGACATCTTTTGTCTGGTAAATTAAAGGTACCACTTGGAAGACACCCCATTTTTACTAAAGAGGAAGAAAAGAAATTGGTAGATAACATTAAGAAATTAGAAAAGATTGGTTTTGAATCCGATCGCAACGCCGTGAAAGAAATGGCTTATGAGTTAGCTTTAAAACATGACAAGAAAGATGCTTTCTCTCGAGCATTAAGAAAAGCTGGTGACGTATGGTTCGCTGGGTTTTTAAAAAGGAACCCTGAGCTAAAAATACCAAAACGTAAAAACAGAAAACTTCAAAGAGAACgatcgaaataa
- Protein Sequence
- MQKVRLKAMGVNEAARTYNIPSRTLRRHLLSGKLKVPLGRHPIFTKEEEKKLVDNIKKLEKIGFESDRNAVKEMAYELALKHDKKDAFSRALRKAGDVWFAGFLKRNPELKIPKRKNRKLQRERSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -