Mleu020882.1
Basic Information
- Insect
- Macrosoma leucophasiata
- Gene Symbol
- CFDP2
- Assembly
- GCA_036365455.1
- Location
- JAWQUS010000024.1:21669860-21682240[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-10 6.1e-08 33.0 0.0 4 39 823 859 821 863 0.90 2 4 1.4e-10 8.3e-08 32.6 0.2 2 39 875 912 874 915 0.92 3 4 8e-15 4.8e-12 46.2 0.4 2 45 930 974 929 974 0.96 4 4 1.9e-17 1.1e-14 54.6 0.0 1 42 981 1023 981 1025 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGACAAAGAGAGTTAGTTGTAAAATGCGAGCCACAGTCCGATGAGGATAATTGCGACTCTCAGTACAACCACTTCCTGCACAGTCggTGTGTGGAGGAGCTGGCGCCGGCGCCGGCGGGCCCCGCGGCCACGCCGGTGAGGGAGCCGCCGCccacgcccgccgcgcccgcctcgCCCGCCGCACACGTCGCCACCTTCGAGACCCTCGAGCCTGCGCCTCCACATAACGCGGTTAGTAACCGAACGTGGAATGTCCGCAGCCTGCTGCGACCCGAAAAAGTACCTAACCTTGTAAAGGAGATAAAACGCCTAAAGATAGACGTCATGGGACTGAGCGACGTTAGATGGAAAGGCAATGGAAAGCACACCATAGATGAAGATCATGTCCTCTACTATTCAGGTTCCGACGAATCATCCAATATGTACGGTGTAGGAGTGGTTATTAACGTGAGAACAGTTAAAGGTAATATTGACTTCATTGCCAAATCCTACCGCACTACTATGCTCCACATTGAAGCACAACCGAGAAACATCAACATCGTTTTGGTATATGCGCCAACTGCCGACAAGCCCGACCAGGAAatatataataaacaaccTGCGAAAGTGGGGGAGGGGGAAGTCCAAGGAGTCGTTGGGAAGTACGGGTTAGGGGAAAGGAATGACAGAGGCGACACACTGGTCCAGTTCTGTCAAGAAAAGGATTTAGTGGTcgctaatacattttttaaactaccaGCCAGAAGACTGTATACGTGGACGTCACCTCGCCATATTCACCAAAACATAGTCCGCAATCAAATCGACTATCTGATGATCAACAGTCGCTTCAGAAACTACATTAAAAGTGTAAAAATTTACCCTGGGGCTGACATAAATTCGGATCACAATCCCGTAATCGCTAAACTAAGCTGCGTTTtaaaacaaatgacaaaaaaTTCGGCGCCGAGAAGAATCGACATTCAAAAGTTACGTGACAAAGCGATCAGACTAGAAGCGATGGATGAGATCAATGAGTGGGCTTCTAAGGCGAAAGAGGAGATCGCAGAATCAGTTGAGGAAAACTGGCGTCAACTGAAAACTAAACTTATAAGAGTGTCCTGCGAGCATCTTAAACCGGAAAAATGGAAACCAAAACAAGTGTGGATGACGGACAAAATCTATCAACTTATGGAAGAGAGAAGATTACACAAACCCTCTAATAGTATCAAATATGAGGAACTTGACAAAAGTGTGAGAAGATTGGTTCGTCATACTAGAGACACATGGTACCAGAGCAAATGCGAATATGTAGAAGAACTCCTTAAAAAGCACGATGCGTTCAATAtgcataaagaaataaaaatgatgaTCGGTCGTAATCACGTATTTTACAATTTGGTGGATGACAACAACCTGCCTGTTTTGGGTCTTTCAGCGAAGAAAGCTGTATGGGAAGATTACATCAGAACCATGTTTGCAGATGAATCCAGAAGTACAACACAGACAACCTTTAGCAATGATGGGCCCGCTATACTCAAGGACGAAGTTTGGAATGTACTGTGCAAAGCTAAAGTAGGAAAATCTGCAGGCCCAGATGATGTCTACATCGAGATTCTCAAGCTTATCGACGAGAAGAACGTGGATACCTTGGTCAAATTATTTAACCTTGTGTATGATACTGGGGAACTGCCTGATGATTGGTTGAAATCGGTTTTTATTACTCTCCCAAAGAAGAAGAACCcgaaaaaatgtgaagaattcAGAACGATAAGCCTTATGAGCCAAGCGTTAAAACTGTTCCTAAACATTATACATAAACGCATCAGAATCAAGTGCGACGAACAACTGGGAGATAGCCAATTTGGATTCCGATCTGGAGTGGGCACAAGAGAAGCTCTATTTGCGGTGCAGGTACTGGTGCAGAAATGCAAAGATATGCAACAGGACGTCTTTCTCTGTTTCATCGATTACGAAAAAGCGTTTGATCGAGTACTTCACGACCGCATGGCACTACTCTTAAACGACATCGGACTAGATGATAAAGACATAAGGATCATTCGAAACCTCTACTGGAACCAAAAGGCTACTGTTCGCGTCGATGGCGAAGAAACCAGTGAGGTAGAGATAAAGAGAGGCGTCCGGCAGGGATGCATATTATCACCGATACTCTTTAACCTCTACTCCGAATCGATTATCGCAGAGGCATTGGAGGGACTAAGGGCACCACCCCTTAGTCCCTCCAATGCCTCTACAAGTGAACGGACGGTGCAGGGCTCATCACTCATTGACAGACACTTGTCTTTGATGAACACAATCGAATTGGCCGATTCCTCCGATTTTGCTCCGCTGTTGGCTGTCAAAGATGAACCAGTGTCAGAAGGAGAGCAACAACAGTTAAGCGGCGACGAGGCGAGTGACTCGAGCGGCCCGCCGGCCGAGTCCACCAGCCGCGGTAGCCCCAAGAGCTGGTCGCAGCGAGACATGGACAACGCATTAGAAGCCCTGCGCAAACATCATATGAGCCTAACTAAGGCATCGTCAATGTACGGTATTCCATCGACTACTCTCTGGCAGCGGGCACATAGACTGGGCATCGACACGCCCAAGAAGGAAGGCGCGTCCAAATCTTGGAGCGAAGCTGACTTGAAAGGGGCTTTACACGCGTTGCGTGCTGGCGCCATTTCTGCCAATAAGGCTAGCAAAGCTTACGGCATCCCGAGCAGCACGCTGTACAAGATCGCGCGGCGGGAGGGCATCCGTCTGGCGGCGCCCTTCAACGCCGCGCCCACCGCCTGGCGCCGCGCCGACCTGGCGCGCGCGCTCGCCGCCATCCGCGCCGGCGCCGCCTCCGTGCAGCGCGCCGCCGCACAGTACGGCATCCCCACCGGAACACTGTATGGGCGATGTAAGCGCGAGGGCATCGAGCTCTCGCGGTCTAACCCCACGCCCTGGTCCGAAGACGCTATGGGGGAAGCTCTTGAGGCGGTCCGAGTGGGGCAGATGTCCATAAATCAAGCAGCCATTCATTACAACCTCCCGTACTCTTCACTTTACGGCCGATTTAAACGGTGCAAATATCAACCGCAGTTCCAGCCTCAGCAGCAGGAACCGAAGATGGAGCTGGAACAGATGAATCCCCAGGACCCTTACTACCTGCACCGCCCCCTGGGGCACGAGGAGCAGTACGCGGAGGTCCCACTCCAGGAGTACCTGGTGCTGCAGGAGTACGGGGAGGGATACCGGCCGCCGCCAGACCTCATGCAGTACCCGGTGCCCAGCTGA
- Protein Sequence
- MPGQRELVVKCEPQSDEDNCDSQYNHFLHSRCVEELAPAPAGPAATPVREPPPTPAAPASPAAHVATFETLEPAPPHNAVSNRTWNVRSLLRPEKVPNLVKEIKRLKIDVMGLSDVRWKGNGKHTIDEDHVLYYSGSDESSNMYGVGVVINVRTVKGNIDFIAKSYRTTMLHIEAQPRNINIVLVYAPTADKPDQEIYNKQPAKVGEGEVQGVVGKYGLGERNDRGDTLVQFCQEKDLVVANTFFKLPARRLYTWTSPRHIHQNIVRNQIDYLMINSRFRNYIKSVKIYPGADINSDHNPVIAKLSCVLKQMTKNSAPRRIDIQKLRDKAIRLEAMDEINEWASKAKEEIAESVEENWRQLKTKLIRVSCEHLKPEKWKPKQVWMTDKIYQLMEERRLHKPSNSIKYEELDKSVRRLVRHTRDTWYQSKCEYVEELLKKHDAFNMHKEIKMMIGRNHVFYNLVDDNNLPVLGLSAKKAVWEDYIRTMFADESRSTTQTTFSNDGPAILKDEVWNVLCKAKVGKSAGPDDVYIEILKLIDEKNVDTLVKLFNLVYDTGELPDDWLKSVFITLPKKKNPKKCEEFRTISLMSQALKLFLNIIHKRIRIKCDEQLGDSQFGFRSGVGTREALFAVQVLVQKCKDMQQDVFLCFIDYEKAFDRVLHDRMALLLNDIGLDDKDIRIIRNLYWNQKATVRVDGEETSEVEIKRGVRQGCILSPILFNLYSESIIAEALEGLRAPPLSPSNASTSERTVQGSSLIDRHLSLMNTIELADSSDFAPLLAVKDEPVSEGEQQQLSGDEASDSSGPPAESTSRGSPKSWSQRDMDNALEALRKHHMSLTKASSMYGIPSTTLWQRAHRLGIDTPKKEGASKSWSEADLKGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRRADLARALAAIRAGAASVQRAAAQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQPQFQPQQQEPKMELEQMNPQDPYYLHRPLGHEEQYAEVPLQEYLVLQEYGEGYRPPPDLMQYPVPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -