Basic Information

Gene Symbol
kn
Assembly
GCA_036365455.1
Location
JAWQUS010000003.1:7680021-7694741[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-141 6.9e-138 461.3 0.0 177 387 13 240 8 245 0.98
2 2 1.4e-07 0.0009 18.4 6.8 420 504 249 338 241 418 0.55

Sequence Information

Coding Sequence
ATGAGTGTTGGCACTGCAATATTCGGCGTGGCGGCACCGGTGCCGGAGGCTATATTTTTTCTGAAGTTCTTTCTGAAGTGCAACCAGAACTGTTTGAAGAACGCCGGAAACCCACGGGATATGAGGAGATTTCAAGTGGTGATATCAACGCAAGTGATGGTGGACGGACCTCTGCTAGCGATATCGGACAACATGTTCGTTCACAACAACAGCAAGCACGGGCGGCGGGCGAAGCGCCTAGACCCCACTGAAGGTACCGACGCCACCGACCCCACCTCGGGACTATATCCTCCGTTGCCAGTAGCAACGCCATGCATCAAAGCAATATCACCGAGCGAAGGTTGGACATCAGGGGGTTCCACGGTAATAATAGTCGGAGACAACTTTTTCGATGGACTTCAAGTTGTGTTTGGGACTATGTTGGTTTGGAGTGAGTTAATAACATCACACGCAATAAGAGTGCAAACCCCGCCTCGGCATATACCTGGAGTGGTTGAGGTCACGCTTTCCTATAAGAGCAAGCAGTTCTGCAAAGGAGCTCCCGGGAGATTCGTCTATGTTTCAGCTCTCAACGAGCCGACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCGAGGCATCCTGGTGATCCAGAGAAGTTACCAAAGgaaataattttaaaacgagCCGCGGACCTGGCAGAAGCCTTATACTCGATGCCTCGAAACAACCAATTGGGACTGGGAGCTCCCCGGTCTCCGCCTGCCAGTATGCCTTTCAACTCCTATACTGGACAACTGGCCGTCAGCGTTCAGGACACCGCCGCTTCGCAGTGGACTGAAGAAGACTACGCGCGTAGCGGCGGGTCGGTTTCCCCGCGGTACTGCTCGGCCGCGTCTACCCCGCACGCGCCCGCCTCTTACCCGCACCCGCAGCACTACCCCGCGCCGCCTACCTCGCTCTTCAACACTACCTCGCTTTCTCTAGGACCATATCACCCGGCGAACATGAATGGACACTTATCGTCTGACCATCACCACTATAACGCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGTGGATTCTAAAAGCGCGGCCGACTGTCCAGCAAACACTCATGCAAAATGCAGCGACAGCGATATGAAAGGGCAACTGAGTAAAGAGAGTAAGCTAAGGAGCGCCTTTGCGGTGGTGAGACACAGTCCGCCTCGCGTTGCCAATATACAACATCATCAAAATTGGCAACATCTAGCTGTCCAGTGTTAG
Protein Sequence
MSVGTAIFGVAAPVPEAIFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGTDATDPTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEDYARSGGSVSPRYCSAASTPHAPASYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDHHHYNAYNTKDSGHYSERNVDSKSAADCPANTHAKCSDSDMKGQLSKESKLRSAFAVVRHSPPRVANIQHHQNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_00176893;
80% Identity
-