Basic Information

Gene Symbol
-
Assembly
GCA_036365455.1
Location
JAWQUS010000012.1:1444206-1467954[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-12 1.4e-08 35.7 0.2 2 89 227 301 226 301 0.88

Sequence Information

Coding Sequence
ATGTCATGTGCCAAATGGTGTAAAGACGAAGTGCTAGCGATCAACGACAAAGTGGTAGTCCGTGCTGAAGACCTTCTGTCCTGGGTGTGCACTGGGGTCGGGTGGCGCTGGGGCCTACGCGCCGTGTGGCGGGGGGCCTGCGCCCCACCCGCCGACCCGCGTCTCACTTCGCCGCTGCACCACACCAAGCTGGACTTCAGTGATGTGGAACGAGAGAAGAGCGCTATATCGGTAGACGCGGACAGCGCGGGAGTGGTGGTGTTCTCATACCCGCGCTACTGCCGCTACCGCGCGCTGGTGTCTCGGCTGGAGGGGATCCAGGCGGACTGGCTGCGGGACTCTCTGGTGGCCGCCTTAGGGGGGTACGCGGCGCCCACCCGGAATACCAGGATATTGTATTGCAAGGACACATTCGAGTACCCGGAGCTAGAAGGACACGAGTTCGTCTGCAACCACCTAGCGCCGAAACTGAAGGGCAGGCCGCGGGGCCGGCGCCGGCGCCCGCCGCGCTCTCGCTCGCACTCGCCGTCCTCTCGCTCCAGCGACAGCGATGCGCCCGCGCACCACGTGCAGCCCACACCGCCTACTGACAACAAGACGCCCCGGAGACTCTCTCTCCGGAACGGCGCAGAGAAGCACAGCGAAGAAGATGACGATAGAAAGGACGAGACGCCGGAGGAGAGTGAGTTCATGAGCCAACTGCGGCAGTTCTACAAGGAGAGAAACGAGACTTTGAAGATTTCGCACCCGCTGAAACATTTGTCGATGCGAAGTCTATACTATGGTGTGATGTGTCGGGGGGGTTACGAGGCAGTCTCCCGAAGAAAACTGTGGCGGGCGCTACATAGGGAGCAGCCGGCTAAGGCGCGCTCGTTGTACGAGAGGTACCTCCTGCCCCTAGAAAACCACGAGCGGCGCTTCGGCTCCGGCCTCTTCAACAAAATATCCAACGGCAAACTGGATGAACCAAAAACGATAGACACAATAGAAGTAACAGACTCCCCTCTTCGAGAGATAGACACCAAGCAGGAAATCGAAACGAAACGCCTCCGGACCCCATCCCCCAGGGTTGACAATGAAACTggagaaattaaagaagaactGAACATAACTAGCAAGCCTGCTGAAGAATTGAACAGGGAATTCCTCGAATCCCTACCCAAAGAAGATAAGACTTTCAAAATAAGTGTAAAACCCGTTGAAAAACTTTTAGATCCGGACGTAAAGGATAGTGTAGTGAAAATATTTGAAGAGAACAGTGCTTTAGTGTGTGAGTTAGAGGCTAAACATAATTTGAAAGACAGTAAAGTGATAAGTGAGATTGGTGAGAAACAGTTGAGTGACGGTAGCTCGCTGTTCCTTAGTGAGTTGGCACAAAAGTTGAACTTAGGTAATACAGACACGGCGTTCCTAAAAGAGGTTTCCCAGAGCCAAGTCCCCGTGTCTCACGCCCAGAACGCCCTGACTAGCTTATCGAACCTGGGTGACAAGTACGCTGTAAATGGACATGCCACCGTTGGCGACCAGCAGAAAAGTCGTCCGGCGGGGCGAAGCTCCCTGCGCGCCGTGCGGGTCAAGCCGGCCCGCCCACACGCGCACCACGCGCACACACCGCCGGCGTCGGGCTTGCGGCCGGAGTCTGCGTCGTCGTCCCCCcagccgccccccgcccccctgccgccccccgcccccctcacCAACTTCGGCATTCACCACCCCCCGGCGCCACCTACGCACACTGATGATGATATTGTAGAGGTACCATATAAACCCAAAACGCCAGAAATCATCGACCTGGACGAATACCCAGAAAGTCCGCAAGGGATCAAGAAGAAAAAATTAGATATTCTCAAAGAACGAGGCCTCGAGGTCACCGCCCTACCCCCCACCCCGTGGCCCCAACCCGTCCTCCCCACACCCCTAATCAACCCCCCCATCATCCTAAACCCAGCCGTCCAACACCAAATAATGACCCAAGCGCAATTATTCCAAATGTACAATATAATCCCCCAAAATTACGCCAACGGAATTCAACCCCCCAAAGTCATCCAAGGTACAAGCATCTTCGGGACGTCGGGCCCTGAAAAGACGGTCTATGGCAACCCCAAGGACCCATTCATGCCCCCACCTCACGTCCTACACGGGACCCCAGTGAAACCACAAAGGGTACAAACCCCAATGACACCCCCCCAAGATATCTTAGATCTAACATGCAAAACCTCCCCCGGACCTCAAAAACCTGCTGTCGAAATCGTAAGGGTACCCAACGCCCCCTCCCCATCTAAAACCCCAACGGCTCAGAATCTAACCAAAAACTACACCCTACTAGACGGCAAAGCGGTAGTCGGTTCAAACCTCGAAATAACCCTAGTTAGCCCCAAAACGCAAACGCCGCCGAAAAGACCTCAAAAAAGGTCTTCCAACGGCCAATTCATGGCCAAAACGCCAACACCACCGAAAGACTACACCAAATCTTACCCTTCACCTGGACCCAAAAAAGCCCCTATAGTTGTTCCGACTTACCCATGCCGTGATGACGTGTCCCCAACTAGTTCGACAGGCTCGAGGGACTCTCAGCCTAACATGAACGTATTTAAAGCCCAAAATAGCTTAGCACAGATTATGGAGATGCAGAAAACAATTCCAAACGTCACACACTTCATGGACCCATATATGAGCGCGTTTTACAATAGTTTGGGGCAAATGGATCAGAGGCAGTTAGCTATGTATAGGGACTTAATGACCAATCAATTCAGGGGATATAGCGGTCTCTTGAATATTGCCACTCCTACaacgaaaaattaa
Protein Sequence
MSCAKWCKDEVLAINDKVVVRAEDLLSWVCTGVGWRWGLRAVWRGACAPPADPRLTSPLHHTKLDFSDVEREKSAISVDADSAGVVVFSYPRYCRYRALVSRLEGIQADWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNHLAPKLKGRPRGRRRRPPRSRSHSPSSRSSDSDAPAHHVQPTPPTDNKTPRRLSLRNGAEKHSEEDDDRKDETPEESEFMSQLRQFYKERNETLKISHPLKHLSMRSLYYGVMCRGGYEAVSRRKLWRALHREQPAKARSLYERYLLPLENHERRFGSGLFNKISNGKLDEPKTIDTIEVTDSPLREIDTKQEIETKRLRTPSPRVDNETGEIKEELNITSKPAEELNREFLESLPKEDKTFKISVKPVEKLLDPDVKDSVVKIFEENSALVCELEAKHNLKDSKVISEIGEKQLSDGSSLFLSELAQKLNLGNTDTAFLKEVSQSQVPVSHAQNALTSLSNLGDKYAVNGHATVGDQQKSRPAGRSSLRAVRVKPARPHAHHAHTPPASGLRPESASSSPQPPPAPLPPPAPLTNFGIHHPPAPPTHTDDDIVEVPYKPKTPEIIDLDEYPESPQGIKKKKLDILKERGLEVTALPPTPWPQPVLPTPLINPPIILNPAVQHQIMTQAQLFQMYNIIPQNYANGIQPPKVIQGTSIFGTSGPEKTVYGNPKDPFMPPPHVLHGTPVKPQRVQTPMTPPQDILDLTCKTSPGPQKPAVEIVRVPNAPSPSKTPTAQNLTKNYTLLDGKAVVGSNLEITLVSPKTQTPPKRPQKRSSNGQFMAKTPTPPKDYTKSYPSPGPKKAPIVVPTYPCRDDVSPTSSTGSRDSQPNMNVFKAQNSLAQIMEMQKTIPNVTHFMDPYMSAFYNSLGQMDQRQLAMYRDLMTNQFRGYSGLLNIATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-