Basic Information

Gene Symbol
Arid2
Assembly
GCA_036365455.1
Location
JAWQUS010000026.1:10565834-10589687[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.1e-22 3.6e-18 66.5 0.1 2 89 17 101 16 101 0.94

Sequence Information

Coding Sequence
ATGGctaaaacacaaataaataccAAATCCAGTAACTATATAAGAGATAAAGAGACGTTTTTGAAGGAATTAAAGCAGTTTAATGAAAGCAAAAATATACCGTACAAAGTTCCAGTGGTTAATGGTATTGACATTGACTTATACCTTTTCTATTCATTGGTTCAACAGAGAGGTGGCCTTGGAAAGGTCAATCAAAATGATACATGGGAAACATTTCTTCGTCAGCTGAGACTCCCGCATCCATGTATAAATGGATCTACATTATTGCGACGGATTTATGGAACATATCTAGAAAAATATGAGAGAGCCAAAGGACCACCCGGCCGAGATGATGACAATGACATGGATGAAGACCCACGCAGAGGCAGCAGAGGAGGGATGCCTCGGATATCATTTGGTGGTGGTACATATATTTCTGCATCCGGCGAAGCACTTCGCCAGGCCAATCGTGTGGCAGGTCCTTCTGAACGGCTGACTCTGTCGCTGCTATCGCCGATGCCCAATGAGCAGGACTTCGCTGTCAACGTATGCACAGTCCTGGCTGCTGACCATTCGAACCGGCTGCCACTTAGCACAACTCCCCATATATTGGACTTTTTGCTTGCTCATGCTGGTGTTTACAATCATTCGAGCCTCCGCGACACAATTGGCCGATCTTACTACGAGGCCCGAGGCCGGTATCCCCACGAGTTCTGGCAGTTAAGAGCCGGCGGCGGTGGCGCTAAGGAACTGGCGGATGAGACCAAGTTCATGCAGCCGGGTCTGGAGCAACCAGAGCTGATGGTTCAGGCGCTGGCAGCGCATAACACCCTGACTGATTGTTTAATGCAGGATGGAAGTGAGACTGATATCAGCGAGAAGATTGTTGAAGAGCAGGATATCCTAGAAGACTGGGTGACAGAGCCGTCGGACGAGGTTCAACTGTTCGCTCCGGAGTTAGCTGGTGGTGCGAGTTGTGTGTTCACACAAAGAGTTCTGCAGATTGCCTCTATAGTGCGATCTCTGTCGTTTCACGAAGAGAACGTTCAGTATTTGTCTAGAAGTACCACGCTTATCAGATTTCTACTTCTTTGTGCCAATTCCTGGGTTGGTACTCTTAGACAATGTGGCCTTGATACTCTAGGAAATGTGTCAGCTGAACTCATAATTAAGGATCCGGCAACTTGTCTCATCTCCCGACATATTCTATCGACAATCCAGACTGCATTAGTGTCGCAAGATAGAGCACGGGTGTTGGCCGCTTTAGAGTTATTGAATAAACTGGCCCAAAATGAGGCTAATGAGGACGCTTTGCTTAAAGCTTTGGAGGCTAAGGTATACGCCGACGTGTGTGCTTTGCTGACACTTCGTGATATAATGGTGCTGGTGTGCACACTGGAGTGTGTGTACGCTCTCACGTCTTTGGGAGACCGCGCCGCCGAAGGTGTCGCTCGAGTGCCCGGTCTTGTGCACACGCTCGTGTCTCTTGTCACTGTCGAGGCACAAAGCTACGGGCCGCGCGCTTGTATCCTGATGCGCGTGGTGGAGACTGTGAGCGGCCCGGTGGCTCCCGAGGAGCGGCCGCAGCAGCACACACAACAGCATCCGCATCCGCAGAACCAGCAGCAAACGCATCCGCAACAACAGCATTCACAGCAAGTTGTAACCCCAACGGTGAGCAGCCCTGCCAAGGCTCCAGAGCCGAGTCCCGTGACGTCGGCCCCCACGCCCGCCCTCACTTCTATACAACAGTCGCATATGCAGCAGAGGACCGTGCAAGAAAACGAGCACTTCGCTCTAGCATGGTTACGGTCGTCCTACGAAGTGTTACCGGCGAATGACAATAGTGCTTGCGAGGCCGGCGAAGTGTACCGCCAGTACCTCGCCTGCTGCTCCAAACTGGGCCGTAAGGGAGTCATCGCTCCTGCACACTTCCCGCGCCTTGTTAGAACGGTTTTCGGAGGGACGGTAGGTCCAAACACGGTTACCATAGCGACGGGCGAGACGCAACAAGTTTACATCGGTATACGCTCGAAGAACGCACAGAACAGAACAAACCCGCCTGTtgGCCCATCTTCACCGATCCTGAAAGCACAACTAACGAACAAAGCGGCACCCGTTGAAACTAAGCCAGCCGTTTCGCAGCCTCAGGCGAGCACGTCAGGCCCGCACCCGCACCTGGCGCAGGCCCTGGAAGGCTCGTCCAACACGACGCTCATCAAGCACCTGCTCGCCCACAAAGTAAGCCCCTCGCCACACCCGACGCAAGTAGCACAGAGGCAGCAAAGTCAGCAGCGAGTCATCGGACCAGCCACCGCAGCCACAGTCGTGGTGCAAGCAGCTCAGggTATGGAGTTGGATCCAGAAGCGCTAATCAAATGTACGACCATTACGCCGGGAGGTATTGCCAGCAATACACCACAAGAAAAGGTGATTGTGTCTGGCTCTGAAGAACCCGTGGTTCCTAAAGAAGAACCAGTACAAATACAGATAGACGAACAAGCGCAATTGACGATTAAAACAGCTCAGAACAAAATGCTGGCGGACCTACTGGAGAAAAAATCAAATCCACCGGTACAAGTGGTGCAAATGGGGCCGCAAATAAACGCGCCCACCATCCAAATAACCGAGACCGGCCAAATTGTGCAAGTCAAACCCGAAACGAATCCAATCATCCAAATTAACCCTGAGTCCGGCCTAGTGCAGGCGCCGTACTTTCAAATTAAGAACGACCAGGGTCAAATAATTCAGTTGAAGAGCGATCAGTTGTCCGGATTGATTCAGTTCAAGAACGACCAGGGTCAGATCGTTCAGTTGAAGAACGAGGCAGGTTTGGGCAATCAGATCCTGCAGAGTGTGATACAGTCGGTGAAGTCTGAGAAGGAACTGGTGGACACTGTGGTGTCTGATCACTCGTACACGGAGCCTCCGACTAAGAAACAGAAGGTCGATGATAAGCGCGAGAATCCCTCCCCACAGGAGAGCGTTAGTAAAACGGCAGCTAACTTATACGCGGCACTGGCCGCGTCAGCTTTAGAAGATGAAGACGATTTGGTGAGTGTAAATATGATAAAACGGACCGAGGCACTGCGACGCTCCATATTAGCGAATTGTTTGCCATTACGTACGTATACGCAGGAGTTGTACGTGCACGTTATAGAGTACGTGCGAGCGCGTGGATACCACATGGAAAAAAAATACGAGTGA
Protein Sequence
MAKTQINTKSSNYIRDKETFLKELKQFNESKNIPYKVPVVNGIDIDLYLFYSLVQQRGGLGKVNQNDTWETFLRQLRLPHPCINGSTLLRRIYGTYLEKYERAKGPPGRDDDNDMDEDPRRGSRGGMPRISFGGGTYISASGEALRQANRVAGPSERLTLSLLSPMPNEQDFAVNVCTVLAADHSNRLPLSTTPHILDFLLAHAGVYNHSSLRDTIGRSYYEARGRYPHEFWQLRAGGGGAKELADETKFMQPGLEQPELMVQALAAHNTLTDCLMQDGSETDISEKIVEEQDILEDWVTEPSDEVQLFAPELAGGASCVFTQRVLQIASIVRSLSFHEENVQYLSRSTTLIRFLLLCANSWVGTLRQCGLDTLGNVSAELIIKDPATCLISRHILSTIQTALVSQDRARVLAALELLNKLAQNEANEDALLKALEAKVYADVCALLTLRDIMVLVCTLECVYALTSLGDRAAEGVARVPGLVHTLVSLVTVEAQSYGPRACILMRVVETVSGPVAPEERPQQHTQQHPHPQNQQQTHPQQQHSQQVVTPTVSSPAKAPEPSPVTSAPTPALTSIQQSHMQQRTVQENEHFALAWLRSSYEVLPANDNSACEAGEVYRQYLACCSKLGRKGVIAPAHFPRLVRTVFGGTVGPNTVTIATGETQQVYIGIRSKNAQNRTNPPVGPSSPILKAQLTNKAAPVETKPAVSQPQASTSGPHPHLAQALEGSSNTTLIKHLLAHKVSPSPHPTQVAQRQQSQQRVIGPATAATVVVQAAQGMELDPEALIKCTTITPGGIASNTPQEKVIVSGSEEPVVPKEEPVQIQIDEQAQLTIKTAQNKMLADLLEKKSNPPVQVVQMGPQINAPTIQITETGQIVQVKPETNPIIQINPESGLVQAPYFQIKNDQGQIIQLKSDQLSGLIQFKNDQGQIVQLKNEAGLGNQILQSVIQSVKSEKELVDTVVSDHSYTEPPTKKQKVDDKRENPSPQESVSKTAANLYAALAASALEDEDDLVSVNMIKRTEALRRSILANCLPLRTYTQELYVHVIEYVRARGYHMEKKYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-