Meup027150.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000002.1:90257229-90258843[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.012 5.1 9.1 0.9 18 40 82 101 74 107 0.88 2 11 0.13 54 5.8 3.0 18 38 110 127 102 132 0.80 3 11 0.005 2.2 10.3 1.9 14 40 134 157 126 160 0.83 4 11 1.3 5.6e+02 2.6 0.6 18 41 166 186 162 188 0.82 5 11 0.1 45 6.1 0.5 18 41 194 214 192 216 0.91 6 11 0.092 40 6.3 4.9 5 28 210 231 206 242 0.81 7 11 0.00032 0.14 14.1 0.9 10 38 263 288 255 291 0.84 8 11 6.5 2.8e+03 0.3 3.1 18 29 304 315 294 324 0.80 9 11 0.14 60 5.7 3.5 17 40 331 351 312 354 0.80 10 11 0.0087 3.8 9.5 1.1 14 30 356 372 351 385 0.85 11 11 1.2 5.2e+02 2.7 0.4 17 41 386 407 375 408 0.86
Sequence Information
- Coding Sequence
- ATGTATGGTAGaactaaaACTGAAGAAGAAAGAAACACAATTGACACGAAAATTAAAGTAGAAAGAGATTTCGTTGACCATTATGAATATCAAGGAACATCAATTTTAACTGAAAGCAACTTTTCAGAATTTGCAAATTTGGACTTGACATCTAACCGCTCAACGAAAAATCAATTGACTGATAACCGTGGTAAAATATCTACAGCACTCAATTTAACTGTGGATACAATAACACACACGTATATATGTGCTATTTGTGATAGATCTTTTTctcggaaaaaaaatttaagatccCATATAGCCACACATTCCAACACAAATCCGTATACATGTAACATCTGTAATACAGGGTTTTCAAGGAAAAGTAATTTAACAGTGCATACAAGGAAACATACAGGCGAAAAgccatttaaatgttatatatgtgataaattattttctcaatCAAGCAATTTAAGAACACATATGAGGGTACATACCGGAGTAAAAACATATATCTGTGATATCTGTAAACGTCCTTTTTCTCACAAACCAAGTTTAAGAAGGCATTTAATAACTCATACTGGTATAAGGCCATATAAATGCAAACTCTGTGAAAAAGCCTTTTTTCAGAAATCTCAATTAATAGCGCATATAAGGACTCATACCGGCGAAAAGTATGAATGTAATATCTGCAAAAAAGCCTATAGTCATGCATGTTCTTTAACAGTACATAAAAGGACACATACCAGAATAGACTCGTATAAATCTGACATCGGTGGTAAACTTTTTTCTGGAGCAAAAAGTTTAACAAGGCAAACGCAGGCATGTACTTGCGATATCTGTGGAAAAACTTTTTCTTCGAAAAGTAATTTAACGGCACATAAAAGGAGGGGTTCCTATAAATTCACACATTCTAAATTGCCATATACATGTAACATCTGTAATACAGTGTATTTTCATAAATGTCATTTAACAGTACATACAAGGAAACAAACCGCTGAACCgccatttaaatgttatatctGTGATCGATTATTTTCTCAATCAAACAATCTAAGAAGGCATATAAAGATGCATACCGGAGAAAACAAATCTAAATGTAATATCTGCGATAAACTGCTTTCTAGATCTAGTTTAGCAGATCATGCTAAGATTCATGCCGgagtaaaaacatataaatgtgATATCTGTAATAGtgctttttttcaaaaacaaggTTTAAGGAGGCATGTGAAAACACATACTGGTAGAGCTGTATAA
- Protein Sequence
- MYGRTKTEEERNTIDTKIKVERDFVDHYEYQGTSILTESNFSEFANLDLTSNRSTKNQLTDNRGKISTALNLTVDTITHTYICAICDRSFSRKKNLRSHIATHSNTNPYTCNICNTGFSRKSNLTVHTRKHTGEKPFKCYICDKLFSQSSNLRTHMRVHTGVKTYICDICKRPFSHKPSLRRHLITHTGIRPYKCKLCEKAFFQKSQLIAHIRTHTGEKYECNICKKAYSHACSLTVHKRTHTRIDSYKSDIGGKLFSGAKSLTRQTQACTCDICGKTFSSKSNLTAHKRRGSYKFTHSKLPYTCNICNTVYFHKCHLTVHTRKQTAEPPFKCYICDRLFSQSNNLRRHIKMHTGENKSKCNICDKLLSRSSLADHAKIHAGVKTYKCDICNSAFFQKQGLRRHVKTHTGRAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00942047; iTF_00942463;
- 90% Identity
- iTF_00942047; iTF_00942463;
- 80% Identity
- iTF_00942047; iTF_00942463;