Meup046440.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000727.1:64935-66807[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-08 4.4e-05 25.0 0.1 7 38 9 40 5 42 0.92 2 2 0.24 1.2e+02 4.5 0.0 18 38 75 95 71 97 0.84
Sequence Information
- Coding Sequence
- ATGTCTACTGCAGCAAACGTTTCATCGGCCCTTAACGCTATTACTGCAGGCGAATTATCGATTGGGCAGGCAGCTAGAACATACAGAGTGCCTGAAACTACCCTCCGAGAACTTGTCCGGAAGTTAAAGATTGTTCCTAAAATAgcatCTAGAGGCTATGTAAGGACCCAGGACAACGTTAATTTATCCAGGGTCATTGATTTGGTGAAAATGTATGGGTTTACGGTGAACGGTGCGTCCCGGGAGACAGACGTGTCCCGTACAACATTGAAGAAGGCACTCAAgaattatgataatatcagagaGTCTCTTCCTCCACCACCATCAGCCCGAAGGAAGCCAATAGTTGTGGCAGAACAGTCCGTTTCGGAGCACGAAAGTTTGGCCGAAAAAGAAATGGTACGACTAATCGTGGTCTTGGAATTATCCGTGCCAGAGCCCGACGGGGAATCAAAGATTTCACCGCCTTTGGCCCCTGAAAAGTTAACCAAGAATTCTATGATGAAAACCATCATCAAATACCATGGTGAAAAATCCAAAGCTATTGAGCGTATGGTTAAAGTTCACTACCGGAATACATATTTTCCGAGAAGGTTTGTGGCACCGGACCCGGTAAAGTCCGATGACGAGGATGTTAAACTGAACGAGGACGAGGAGCTGCAATTGACTCTCCTGACAAGCTTAACATATACACCCCCCACACCACCCGGGTCACCAGACCTGTTTAACTACTGGGAGGACGAGCGTAAGTATCCCCGTTCGAATACACTTGAACCGTTTTCGTCaacgaaattttttttctctattacAGCACTCGAGATCCAACCCTTTGTGTCACCGGTGGCAGGTCCATCTTGGGCCGAAACCGATCAGTTATCAACGCCAGTGAGATTGAAATTCACAAATTTGTCCAAAGATGCCATAATCGTAGGAAGCAGCAGCGACTCCGAATCGTTGTCTGCGGTGATCGGAAAGAAGAGTCCCCTGCAATATAACAACAGTAGCGAAGACGACGATGATGTCAAATTCAGCTGTGGCAAAAAACGAAGGCTGAATGTCACAGAACGCTACAAAAACGTTAGCAATAAAATGGCGAAATACTGTCCAATTTGTAGTTATAAGACCGACGATAATAAGCTGACCAGGCACATCGGCATTAAGCACGAAAAGTGCTTAAAATACCCCGCAAATCGTAGCTTAAAAAAGATTGGAATGACCCTGGGGAAAGAGTCAAGGCGGTCGATCTCTTTAGTGCTAATGTCGAATATCAAGGAGAAGATGGGCCCGTATTGGGGCGACGTCAGCTTTCGGCGAATTGCTTTCCAaCTTTGCGTCATATGA
- Protein Sequence
- MSTAANVSSALNAITAGELSIGQAARTYRVPETTLRELVRKLKIVPKIASRGYVRTQDNVNLSRVIDLVKMYGFTVNGASRETDVSRTTLKKALKNYDNIRESLPPPPSARRKPIVVAEQSVSEHESLAEKEMVRLIVVLELSVPEPDGESKISPPLAPEKLTKNSMMKTIIKYHGEKSKAIERMVKVHYRNTYFPRRFVAPDPVKSDDEDVKLNEDEELQLTLLTSLTYTPPTPPGSPDLFNYWEDERKYPRSNTLEPFSSTKFFFSITALEIQPFVSPVAGPSWAETDQLSTPVRLKFTNLSKDAIIVGSSSDSESLSAVIGKKSPLQYNNSSEDDDDVKFSCGKKRRLNVTERYKNVSNKMAKYCPICSYKTDDNKLTRHIGIKHEKCLKYPANRSLKKIGMTLGKESRRSISLVLMSNIKEKMGPYWGDVSFRRIAFQLCVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -