Meup044647.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000339.1:434374-438714[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-08 1.8e-05 26.3 0.0 5 44 18 58 17 59 0.94 2 2 0.25 1.2e+02 4.4 0.0 8 39 76 106 69 109 0.79
Sequence Information
- Coding Sequence
- ATGATGTGGCAAATAATTAGTCAGCAATATCTTTATGGCTTATGTTGTAGCATGGATTTAGCATTGGAGTCATTGAGGCTAGGCACTCACTCGATTTCCCAAGCTGCTGTACATTTCAAGGTTCCTGAAACAACGCTTCGTCAACGAGTGTTGAAATTAAACATCAAAGTTAAAAAGGCAACGAGAAGCTACGTAAAAACAGAAGACAACCCAAACTTGTTGGTTGCATTAGACTTAGTGTCAAAAGGCGCTAAAGTCAACGCTGCTAGCCGCATCGCACATGTGCCGAGGACAACTTTGAAAAAATTCTTGAAGCGAGTCAAAGACAACGACAAGAAAACGTTGGCCACTGTTGCTTCGCTTTCCAAGATGGTGTCTGGACAAACACCCCCTACCGATGAAAACATCCAAGTCAGACCGTCGACATCCGGCGATGGTGTACCTGTAAGAGAAGACATCCAAGTCGGACCGTCGACATCCGGCGATGGTGTACCTGTAAGAGAAGACATCCAAGTCGGACCGTCGACATCCGGCGATGGTGTACCTGTCAGAATACACCTGTCAGGACTTCTGACGGTACCCAAAGTCGTGACCAAGTTCAGaggtaaaaaagtgaaaaaggtCACAAGGATGATAGAGATTCACCGGCGCTCTGCGTATTATCCCAAAGGATATATTCAACCTAAAACCAATGACGTCGATGAAGATTACGACGATGCATATCAGGAAGACACAGAGGATGTGGTCAATGATAATGTTGCCGAGGTTGAAAAAACCAATGACGTCGATGAAGATTACGACGATGCATATCAGGAAGACACAGAGTATGTGGTCAATGATAATGTTGCCGAGGTTGAAAAAAAGCCACTTGAAAATGTTCACTACCGTTTTGACGATGACGAAGTTTTCGACCTGGCTAATCTGAACCGTCTGAATATTTATTCGTCACCTTCAACCGACGAATGGGAATTTAACGACGATGACGaagACAATGAAATCGAGAAGTATACTCcgattaaacaaaaaatatcggtGGCATCAGAAATGGTTTTATCGTCCAAAACACCGTCTCCTAAAACCGACGTTAAACCGATTTCTCTGTTGTATGAAAACTCGCCGGTGCCGTCCGCTTCAAGATCCGAAAGACAATCGTACGAACCCGTCATCTACAGGCCGACAAGGGTCGGGTCGGAAGATGCCTTGATCGTTTGTTCTCCGGATTTTTTGGAAGGCTCTTCGATTGTGAGCAatcctAAGTCTCCGTTGCAGTCGTCATTGAAGCTGTCGTGTGAAAACTCGCCGGTGCCGTCCGCTTCAAGATCCGAAAGACAATCGTACGAACCCGTCATCTACAGGCCGACAAGGGTCGGGTCGGAAGATGCCTTGATCGTTGGTTCTCCGGATTATTCGGAAGGTTCTTCGATTGTGAGCAacccTAGTCCATTGACAATCGGTAAAGAACGTAACCGCAATATTTTCAGCTATGAAATTGTCAATACGATCAGCGGCCGtCTTTTGAAGTATTGTCCAATTTGCCGGTACGTGACCCAAGACAATAAAATGTCTCGGCACATTCAGACCCGGCACGAACGTCTAATCCGGCAACCAATTAAACAAAGCCTAAAAGCTATAGGCAAGATCTTCGGTGGTGAATCAAGAAGATCAGTTTCGTTGGTGCCGATGCGATTTATCAAAGAAAAACTCGGCCCATATTGGGATGACGTCAACTATAGAAAAATCGCTTACCAGCTTTGCATAATGGGTAGACTAAAAGTATATGGTGGATCATGGGACCTGCCGGAGGCTCCGGTCGTAATGAGCCCATTTCGTGATTTTCTAAACGAAGATACACAAGACAATGTACAAACGACCCCTGCGGTGAAACGGGTGCGAAGCCCTACTACGTTGCCGCCAGATAATGTAGAATCTCCGAGTAGTAAAAAATTCAGGCAGATGTTGGTACATAGCGGATATCAGGATCAAATAGACAGCAAACACCCGCTAATGGTACTTCACCGCCGAAGTCTTGAGTTGAGTCACGGAAAAGACTCGAGGGCGGTGAAAAACTATTTGTCCAACGTCGCAAAAATGCTGTACCATGTAAACGTTTGGTGTAAAGAAAAGAACAATAAAACACCAAAACATTGGTCGGAACTACTGGGGACCAGCGTGGAACCGTTCCACGAGTTTCTGGAAAAGCGAGAAGAAATCGGGCAGACGATTAGCACGTCGATCAATTACTTGAAGAATTTCTTGTATCTCTTCGACCAGGCTATCACGACATATTCGCTTGAGGACCAGTCGTTCCCGAGAGAATTTGATTCTACGCCCTCCACCACAACCATAAACCGTATGAGACTGGTTAGACAGAAACTCGGTctcatatataaaaataaattaaaacaaatgcCAGGAAAGATTTTCgagagaaaaataaaagaagcCAACGAAATGCCGGAGTACGGGAAAGTGGTTGAAATTATTAACAGCATAAATGGCGAGATACCTAACCTACTTGATCGGCTGGAGGATTATTTACAGGAAAGTCTTTACTTGGACTTAACGTCATCGGACCCGATAAATACACTCCTGAGTGGACTGTGGAGAAAAGTATCCTGTGGCTTGGCCATATGTATACTGTGGAGCTCCAAACACAGGAGCGGCGTGGTGTCGAACTTGACACTTATGGAGTGGGAGGGTCGGCGTCACGACGGCACGAGAATCGTCATAACCGTTGCAAAACACAAGACCGGTGATAGGGAACCGGCGACGATTGTTATCGATTCAGAAATGGCCAACCAAATGGAAAGATACCATGAGCTCCGCAGAAAACATAGAACAAAAGAAAACACGTTTTTCATAACTAACCGCGGGGGGCGGCTGCTGAAAATATATgatgaaatcaataaaattcaCCATGCAAATTTTTCTGCGTGTCTATTTCGTAGAATGATTGAAACAAAATCCCGGGGCCACGATCAAACCATAAGGAGTGGTGTAGCAAAGACGCTACAACACTCCGAAGAGATGGCATTGAAATTTTACCAGGTGCCAGACATCGATGAGGCCCTGAGAAGACAAACGACAATAGATACCGTCGATCAGACGGCGAGGTTCGAGGAGGAGGTTATGGATGAGTTCGACGATATACTCGCCCCGGAACCGTACATAAACCTCAACAACGGCGCAATGGTGCGTGAAAAATTGATCGATTCGACGGCGTATTCATTGCACCCGACGGCCGTGATTAGTGACGCATTCATAAAAAAGATTCAAAGGAAATTTAACCGGTCTGTGGTGGACAGCCGGGTCGATATTATTTATGGATACGCCGTCCAATATCACACCGCCGATAACATTGACAAACGGGCATTGACAGAATTGACGAGGCAGAAAAAAATACACTATTTACCCTGA
- Protein Sequence
- MMWQIISQQYLYGLCCSMDLALESLRLGTHSISQAAVHFKVPETTLRQRVLKLNIKVKKATRSYVKTEDNPNLLVALDLVSKGAKVNAASRIAHVPRTTLKKFLKRVKDNDKKTLATVASLSKMVSGQTPPTDENIQVRPSTSGDGVPVREDIQVGPSTSGDGVPVREDIQVGPSTSGDGVPVRIHLSGLLTVPKVVTKFRGKKVKKVTRMIEIHRRSAYYPKGYIQPKTNDVDEDYDDAYQEDTEDVVNDNVAEVEKTNDVDEDYDDAYQEDTEYVVNDNVAEVEKKPLENVHYRFDDDEVFDLANLNRLNIYSSPSTDEWEFNDDDEDNEIEKYTPIKQKISVASEMVLSSKTPSPKTDVKPISLLYENSPVPSASRSERQSYEPVIYRPTRVGSEDALIVCSPDFLEGSSIVSNPKSPLQSSLKLSCENSPVPSASRSERQSYEPVIYRPTRVGSEDALIVGSPDYSEGSSIVSNPSPLTIGKERNRNIFSYEIVNTISGRLLKYCPICRYVTQDNKMSRHIQTRHERLIRQPIKQSLKAIGKIFGGESRRSVSLVPMRFIKEKLGPYWDDVNYRKIAYQLCIMGRLKVYGGSWDLPEAPVVMSPFRDFLNEDTQDNVQTTPAVKRVRSPTTLPPDNVESPSSKKFRQMLVHSGYQDQIDSKHPLMVLHRRSLELSHGKDSRAVKNYLSNVAKMLYHVNVWCKEKNNKTPKHWSELLGTSVEPFHEFLEKREEIGQTISTSINYLKNFLYLFDQAITTYSLEDQSFPREFDSTPSTTTINRMRLVRQKLGLIYKNKLKQMPGKIFERKIKEANEMPEYGKVVEIINSINGEIPNLLDRLEDYLQESLYLDLTSSDPINTLLSGLWRKVSCGLAICILWSSKHRSGVVSNLTLMEWEGRRHDGTRIVITVAKHKTGDREPATIVIDSEMANQMERYHELRRKHRTKENTFFITNRGGRLLKIYDEINKIHHANFSACLFRRMIETKSRGHDQTIRSGVAKTLQHSEEMALKFYQVPDIDEALRRQTTIDTVDQTARFEEEVMDEFDDILAPEPYINLNNGAMVREKLIDSTAYSLHPTAVISDAFIKKIQRKFNRSVVDSRVDIIYGYAVQYHTADNIDKRALTELTRQKKIHYLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -