Meup061641.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010001817.1:2233-6849[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-11 4.3e-08 34.6 0.0 3 39 173 210 171 214 0.90
Sequence Information
- Coding Sequence
- ATGGCTAATAATATACCAGTGCGTGATCCTGCTAGTAAAACATCAGcagcatttaaattatttattgaaaattatgatCCTTACCAACCAATAGATGTTGAATTTATCAAGATAAATGGTAGATCATTTAGAACTGAATGGTATAGCCAATTCCCATGGATTGAGTTCAGTGAGCATTTACAAGCAGCTTTTTGTTTCAATTGTAGAGTATTTCCATCGAAAAATGCAGAAAAGACTTTCACTAatgttggttttaaaaattggaaGAAAGGAATAGAGAAATTTACTCAACACCAAAAATGTAATGCACACAAAGAGTCTACATGCAAATTGTCAAGTTATACGTTTTCTAAAAAGAATGGATCAGTGATTTCTGAATTGAATTTAGTACATAAGAATCTTGTATCTCAGAACCGAGAATATATTAGATGTCTATTAAAAACCTTTTTGTTTAGTGCAAGACAAGaaATGTCACGTTCAAGAGTCAGAGTTTCTAAACGCCAAAATTGGGATTCAGAAAATATGAGGAAGGCTGTGAAAGAAGTAATTGAAAAACGCATGACATTTCGTAATGCCtgtattgaatttaatgtacctaaaaGCACTCTAGAAAGAAAGatTAAACAAAAGAACTTAGATCCTAGTTATGACACTGGGAACAAAGTGGCATTAGGACCAATATCTAAAGTGTTATCAACTGCTGAAGAACCTGAGCTATTATCCTATCTTCAACTTATGGAAGGACGTTTATTTGGACTAACGTCAAAAGATTTACGAAAGATTGCTTATCAGCTATATATGTTTTGGATTATTTAG
- Protein Sequence
- MANNIPVRDPASKTSAAFKLFIENYDPYQPIDVEFIKINGRSFRTEWYSQFPWIEFSEHLQAAFCFNCRVFPSKNAEKTFTNVGFKNWKKGIEKFTQHQKCNAHKESTCKLSSYTFSKKNGSVISELNLVHKNLVSQNREYIRCLLKTFLFSARQEMSRSRVRVSKRQNWDSENMRKAVKEVIEKRMTFRNACIEFNVPKSTLERKIKQKNLDPSYDTGNKVALGPISKVLSTAEEPELLSYLQLMEGRLFGLTSKDLRKIAYQLYMFWII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940332; iTF_00940333; iTF_00940334; iTF_00940336; iTF_00940372;
- 90% Identity
- iTF_00940336;
- 80% Identity
- -