Meup003156.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000001.1:40638163-40641300[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-11 5e-09 37.6 0.0 4 43 32 71 29 73 0.90
Sequence Information
- Coding Sequence
- ATGGTTTGTACTTCATATCAATGGAGAAAAAGTAAtggttcgtgtgtacaaaaaaaagttgGCAGTCGCCCATATGCGAATATAACAGATGCGGTTTTGGAAGAAGCACTTAAAAAAGTTGTTGATGGTgaactttcaattttaaaggctagtaaaatatataaaattccgTATGGAACATTACACAACCGTTTTACTGGGAAACATGGCAAAAAACCTGGAGGACAGTCAATATTTAGTGATGAGGATGAAAAGAATATGATAGCTGCTGTATCAAAGTGTGGTGATTGGGGATTCCCTTTAACTCTAATGGATTTAAGAATAATTGCAAAATCATCATTAGACAAAAGAGGAATAGTAGTTAAACAATTTCATGATAACCTCCCAGGTGATGATTGGGCAAGAAGTTTGTTAAAAAGACACAATTCACTGACTCAAAGAATTACAACAAACATTTCTCGATGTCGTGCCGAAGTCTCCCCTACTacaaatactaattactaa
- Protein Sequence
- MVCTSYQWRKSNGSCVQKKVGSRPYANITDAVLEEALKKVVDGELSILKASKIYKIPYGTLHNRFTGKHGKKPGGQSIFSDEDEKNMIAAVSKCGDWGFPLTLMDLRIIAKSSLDKRGIVVKQFHDNLPGDDWARSLLKRHNSLTQRITTNISRCRAEVSPTTNTNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018931; iTF_00940309; iTF_00940310;
- 90% Identity
- iTF_00940310;
- 80% Identity
- iTF_00940310;