Meup052432.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010001124.1:29225-33505[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-09 6.6e-07 30.9 0.0 8 38 9 40 7 43 0.89 2 2 0.0022 1.1 11.0 0.0 2 38 58 94 57 97 0.93
Sequence Information
- Coding Sequence
- atgtttaaaGTGAACGTGAGAAGTGCGTTAAACGCCATATCACAGGGAAATCTGTCGATTTGTCAGGCCGCAAGAGGCCACGGGGTGCCCGAGACCACTCTAAGGGAGCtggtcaaaaaattgaaaatcgttCCCAAAAAAGCATCTACAGGCTATATTAAAGtcgaaaacaatgaaaaattatcGAGGGCAATAATGTTGGtgcaaaaaatgaaatttaccGTCAACGGTGCTTCTAGGGAATGCAAGGTCCCTAGAACAACTTTGAAAAAGGCCCtcaaaaattttgaaaagatCAAAGgGTCTCTTCCAACACCGTCTTCGGGTGGAAAACCATTAGTTGTTTTAGAGACGAGTGTGCCGGACGTCTCTAAAAAGTTAGTCGTGTTGGAGGAATCGATGCCAGAAAAAGttgtgttCAAAGGCAGAAAATGTAAGCCAGTGTTGGTGAAGCGTTTGGTGGAAGTCCACAAACGCTCGGCTTATTCGTCAAGGCCACCCgttaaagcTGAAAAACCGTTGGATGATAATATGGCCGATGACGTGGCCGATGACGTGGCCGATGACGTGGCCGATGACGTGGCCGTTGACGTGGCCGATGACGTGGCCGATGAATATCTCCCCGTTAATACACACACTCGGTGGTTGGACGATGACGAGTTAGACGTCGCAAACTCTAACGAAAATGATGGAAATGCTGTTCCATCGCCTGACCCTTATGAGTTCACCGAGGACGAGTCGGAGTTAGAACACTTTAATTGTGTCCCGGGACATACGTCCAGCAAACTTGAGGTGGACAAGGTGTACACACCATCTCCACCTCTTCTCGATGAAATTCCACATTTTCATGAGTCGCTGTCATTTACGCCCGTCGTGGATGTCGAGGGAGATGGCGTATTGGTCAACGTTGAAAACCATGATGTCGCTCTGGTTGACGATGACTATGACTCGTACGTCGACGACGAACTGGACCAAGAACAATGGAAGTATGCCCCGGGCACATCGAGGGACACAAAATTTTCACGCGCCTCAAATGGACATTCGTCGAATGCGTCGCCGGTCATCGGACTAGCGAGTCCATTGATGGTACCCGATGTTTCAAAGATGTCGTCACGCAACTCGTCAATCTCCCGCaGTCCATCTCCAACGCCATCCAGAACCAGGAGAACCAGGCTGAACGTATCTGAAAAAATAACTAGCCTTATAACAACACGCCTGTTCAAGTACTGTCCGTTCTGCCGTTATACTACGGACGATAATAAAATGACCCGACACATCGGATTAAAACACAGGCAGCTCCTGAAACGACCCGTCAAGGCTAGCCTTGATGGCATGGGCAACACCTTTGGCGGGGAGTCCAGGCGCTCTGTGTCCCTGGTCCCGATGTCCGTCATCAGAGAACAGATGGGTCCTTATTGGGATGACGTTTCATTTCGACGCATCGCCTTCAAATTGTGCGTCATGGGTAGGCTTAAGGTTTACGGTGGGGCGTGGGACCTCCCGGAGGCACCCACCATCCCTAACCCCTTCCAAAAGCACATAATTGAAGATCCGTTGCCATCGCCGCCACGCACACCGGTGATGAGAAGACAGCAGCATATCCGAGTGGAGCCCGTTGACGAGCCCGAGTACAAAAAGGTACGTAAGCAGCTGGTCGACCAGGGTCTCCAGGAGCAACTTCCGACCAACCATCCGCTGATATCCCTCCACTCGAAGTACCTCGAGTTAGGCCACGAGAAGGATTCTCAGGCATGCAAGAATTACCTTGCGAATGTCTCGAGAGTCCTTCAGTTCGTCTCGACGTGGCTCAACGATCGTGGATCTCCGCCGAGACATTGGTCGGAATTGTTGTCTTCCAGCGAGGAGCCATACGTCAGATACTTCACGGAgagaGAGGAACTGGGCCAAACAACGGcgacaacaataaattatctaaaaaatctaCACACGTTACTGAGCTCGGCCATCACCTTATACGCGCTGGAGGACGAGACTTTCCCAAAATGTTTCGACGGTGGGCCGAGCCAAACTGTCATCAATCGGATTAAACTGCTTCAGCAGaagctaaaaatattttacagtaaaaaaatcaAGCAGCAGTCGGGAGACTTGTTCCGCAGGAAGACTGCCGAAGCTCTCTTGGAGGAACACTTCGGCCCCGGTGGTATGGTCAAGGTCTCTAGCGATAAGACGTCCACGCCAGCGCAGAAACACCTCTCCGGGATTTGGCGAAAGGTCGTTTGTGGCTTGTCCATCCGTCTTTTGTGGACCTCGAAGCAGAGGAGCGGTGTGGTGGCAAATATGTTGATTGAAGAGTGGGAGCGCCGTAGGGTCGAGGGCGAAAAGACTGTGGTGACGGTCTCCACCCACAAGACCGGGGACAAGGAGCCGGCCACCTTAGTCATATCACATGGAAAGGCCGAGCTAATGGAACGGTACTTTTCACTACGTCAGCGGGTCATCACGTCCGCGAAACAGTTTTTCGTGACCAACAAGGGCGAGAGAGTCACAAAACTATATGAtgacattaataaaatttacgGTTCACGCTTGTCGGCCAGCGTTTTCAGACGTATGGTCGAAACCAAATCCAGAGGGCACCACCCCGACGTGAGCAAGTCGGTGGCGGTGGCACTCCAGCACGGAGACGGCACGGCGCTCAAATTTTACAGGCTGCCGGACACCAATGAGGCCATCCGCCGGCACGACAAACTGGAAATGGTCGGTGCGACGGCGTTATTTGAGGCGGAGGTGTTGAAAAACTTTGTAGAGATATTCGGCCATCAGGCCTATGTCAACATGACGCATGAAAACATCGTCGAGAGGCTGCAGACGTCGGACGAGTACGCCGCTCATGATGGGGCCGAGATCACTCAGTCGTTCGTCAGACGGGTGAAGGCCCGGTACGACGAACAAGTCCACGACGACCGAGTTACGATAATTTACGATCTGGCGGTACAggaatatgaaaaaaacaacatttcaaaatatgcGGTTGAAAATCTGGCgaaggaaaataaaatacattatttccTTTACGCAAATAAAGAAAAGATTGTTAAGGACGTGGTGAAAAGATTTCAATAG
- Protein Sequence
- MFKVNVRSALNAISQGNLSICQAARGHGVPETTLRELVKKLKIVPKKASTGYIKVENNEKLSRAIMLVQKMKFTVNGASRECKVPRTTLKKALKNFEKIKGSLPTPSSGGKPLVVLETSVPDVSKKLVVLEESMPEKVVFKGRKCKPVLVKRLVEVHKRSAYSSRPPVKAEKPLDDNMADDVADDVADDVADDVAVDVADDVADEYLPVNTHTRWLDDDELDVANSNENDGNAVPSPDPYEFTEDESELEHFNCVPGHTSSKLEVDKVYTPSPPLLDEIPHFHESLSFTPVVDVEGDGVLVNVENHDVALVDDDYDSYVDDELDQEQWKYAPGTSRDTKFSRASNGHSSNASPVIGLASPLMVPDVSKMSSRNSSISRSPSPTPSRTRRTRLNVSEKITSLITTRLFKYCPFCRYTTDDNKMTRHIGLKHRQLLKRPVKASLDGMGNTFGGESRRSVSLVPMSVIREQMGPYWDDVSFRRIAFKLCVMGRLKVYGGAWDLPEAPTIPNPFQKHIIEDPLPSPPRTPVMRRQQHIRVEPVDEPEYKKVRKQLVDQGLQEQLPTNHPLISLHSKYLELGHEKDSQACKNYLANVSRVLQFVSTWLNDRGSPPRHWSELLSSSEEPYVRYFTEREELGQTTATTINYLKNLHTLLSSAITLYALEDETFPKCFDGGPSQTVINRIKLLQQKLKIFYSKKIKQQSGDLFRRKTAEALLEEHFGPGGMVKVSSDKTSTPAQKHLSGIWRKVVCGLSIRLLWTSKQRSGVVANMLIEEWERRRVEGEKTVVTVSTHKTGDKEPATLVISHGKAELMERYFSLRQRVITSAKQFFVTNKGERVTKLYDDINKIYGSRLSASVFRRMVETKSRGHHPDVSKSVAVALQHGDGTALKFYRLPDTNEAIRRHDKLEMVGATALFEAEVLKNFVEIFGHQAYVNMTHENIVERLQTSDEYAAHDGAEITQSFVRRVKARYDEQVHDDRVTIIYDLAVQEYEKNNISKYAVENLAKENKIHYFLYANKEKIVKDVVKRFQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -