Meup061121.2
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010001760.1:176335-179130[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-10 1.6e-07 32.9 0.0 5 39 170 204 169 206 0.93 2 2 0.00027 0.13 13.9 0.0 1 38 221 258 221 263 0.91
Sequence Information
- Coding Sequence
- ATGGTTAAATATTGTCCGGTGTGTGACTTCATGACTGTTGGCCATAAGCTTGGGAGGCACCTTGCAAACCGCCACAGGTCGCAGATAAAAAAGCCCCGAGACCTCAACATCAGAAAGATATGCCAACACATTGCCTCGGAATCCCGCAAGTCCTATTCCGTTGTCCCGTTGCGGGTGATAGAGAAGAAGTTGGGCCCATATTGGGATGACAGGTGTTTTAGAAGCATCGCCCACGAACTTACGACCATGGGAAGGATGAATACGTATGGCGGAAGTTGGAATCTTCCTGATGTAACAGATACGTCAAACCCATTTGAGGAATTTTTCACCGATAGCGATTTCGGTCCCGATACACCGGTGATGAATGTATCTGCGACAACCTGGCGGGTGCCAGTTCCTTCTTATACCGGAAACCTCCGGCGAAACCATTTCGATACCTGGACCTTCCGGCACATCAGGCAGACCAGCCGACACGGAAAAACTTGCTTAATTTTCGAGATGTCGGGAATGAATTTTGCCCTTGATGCTGTGAAATCTGGTCAATTGTCTGCTGGTCAAGCCGCTCGGCAGTTTAATGTACCAGAGACAACCCTACGCGAGTATTTGAAGCGTAGTTGCATCACTCCGGGAATCGCGTCCAGAGGCTATACCAAGGTTTCTAGTAATACAAACTTAACCGCTGCTATTAAGTTGGTACACGATGAGGGGTTGCCCGTGAATGCTGCATCCAGAATTGACAAAGTTCCAAGAACGACCCTACGAAAGGCATTAAAAAACTATGAGAAGATTAAGCATGTACTTCCTCCACCGGATGTGTTTCAACCGATTGAGACCGTCGTTAGGCCAACCGTTCTACACGAGGACACGGCAGACGTGGGTACCGTCGCAGTGCCACTCATTATTGAAGAGGACGTGGAGGTTGAAGAACCCGTCGCAGCGGAACCCGTTCTACACGAGGACACGGCAGACGTGGGTACCGCCGCAGTGCCATTCATTATTGACGAGGACGTGGATGTTGTAGAACCCATCGAAGCGGAACCCGTTGGCCAGGATGTTGGACCTACGACGGttgttaaaaATGTGCTAGTTTTCGGGAAAAAGAGTGGAAGGGCGAAGACTGTTGAGAAGACCGTGGAGGTGCACACAAAATCCGCATATTATCCGCGTCGACCACAGTGGTCTAAACCTGACGACACCGAAATCCATGTCGAAAACGACGAAATCATTGATTTCGTAGAGGATATCGACGACGAAATGGTTGTTGAAACCGTTCTTAATTCCCACATACACTTCGACGATTCATCAAACGACCAGTTTCCAAATCCAACGTTTGTTATGGTTAACTCCGATACCATGGAGGGTAGCGTTGGTGAACTACCAGGACACCCTCCCACTCCACGGCCGTTACTCGTTGAGGAAATATTTACGCCGTCGCCTACACCATCGCCACATTTATTAGAGTTGCCGCCCTCTTCTATGACTTCACCATCGTTACCATCAGCTTCACCGCAACCTCTTTTACCAGGGAGATCGCCGCCACCGACTACCGACCCGTATGAGTTTGTCTTGAGCGAGCCggagtag
- Protein Sequence
- MVKYCPVCDFMTVGHKLGRHLANRHRSQIKKPRDLNIRKICQHIASESRKSYSVVPLRVIEKKLGPYWDDRCFRSIAHELTTMGRMNTYGGSWNLPDVTDTSNPFEEFFTDSDFGPDTPVMNVSATTWRVPVPSYTGNLRRNHFDTWTFRHIRQTSRHGKTCLIFEMSGMNFALDAVKSGQLSAGQAARQFNVPETTLREYLKRSCITPGIASRGYTKVSSNTNLTAAIKLVHDEGLPVNAASRIDKVPRTTLRKALKNYEKIKHVLPPPDVFQPIETVVRPTVLHEDTADVGTVAVPLIIEEDVEVEEPVAAEPVLHEDTADVGTAAVPFIIDEDVDVVEPIEAEPVGQDVGPTTVVKNVLVFGKKSGRAKTVEKTVEVHTKSAYYPRRPQWSKPDDTEIHVENDEIIDFVEDIDDEMVVETVLNSHIHFDDSSNDQFPNPTFVMVNSDTMEGSVGELPGHPPTPRPLLVEEIFTPSPTPSPHLLELPPSSMTSPSLPSASPQPLLPGRSPPPTTDPYEFVLSEPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940291;
- 90% Identity
- iTF_00940291;
- 80% Identity
- -