Meup044650.1
Basic Information
- Insect
- Macrosiphum euphorbiae
- Gene Symbol
- -
- Assembly
- GCA_949089665.1
- Location
- CARXXK010000339.1:450182-450676[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-06 0.0015 20.1 0.1 4 39 3 39 2 43 0.89 2 2 2.4e-09 1.2e-06 30.1 0.0 4 38 58 92 55 96 0.89
Sequence Information
- Coding Sequence
- ATGTCTGAAATGGAATCAGCCATTGAGTCAATTAAAAACGGTGTTTTGTCCGCTGGGCAAGCTGTCAGGAAGTATAACGTGCAGGAGACTACACTGAGAAGCCAACTTACAAAACGAGGCGTTCTCGCTACTGTTGCAACCAGAAATCATACAAAATCTTCTGAAAATCCAAAGCTAGTATTAGCTCTGGCTTTGGTCCAAAATGACGATATGTCTGTCAATAGAGCCTCTAGGGTAGCTGATGTTCCGAGATCAACCCTGAAAGCCGCTATAAAAAACTACGAGAAAATcaaatttatgAACACTGCCACCACCAGCGATTATGTCAATTTTAAAGGATATATCCGAGGTCGTACCGGGGTGCGTTTCTGA
- Protein Sequence
- MSEMESAIESIKNGVLSAGQAVRKYNVQETTLRSQLTKRGVLATVATRNHTKSSENPKLVLALALVQNDDMSVNRASRVADVPRSTLKAAIKNYEKIKFMNTATTSDYVNFKGYIRGRTGVRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00940285;
- 90% Identity
- iTF_00940285;
- 80% Identity
- -