Basic Information

Gene Symbol
ARID4B
Assembly
GCA_949089665.1
Location
CARXXK010000002.1:81662912-81681195[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-25 9.9e-22 79.1 0.3 1 89 312 395 312 395 0.94

Sequence Information

Coding Sequence
ATGAACGAGGTCTACTACATGTACCTACTTGTTATTCCATTAACACTTAAAATGGAAgCGCATTTGGATGAACCGCCTTTTTTTGTTGTCGGAACAGATGTAAGTGCCAAGTACAAAGGGGCATTTTGTGAAGCAAAAATCCAAAAAgtatcaaaaaatgtaaaatgcaaaGTTCAATATTCTAATGGGATATCAACATTTGTCACGGATGATGCAGTAAAAGGACAACtaaaggTGGGGGCTACTGTAACAATACTATgtagtaagaaaaaaaaattacttagaGCAACAATTCAAAAGATTCAAGATTGTAGTCAATACACTGttgTATTTGATGATGGAGATGTAGCATGTTTAAAGAGAACAGCGTTATGTCTGAAAAGTGGAAGACATTTTGCTGCTAGTGCTACTCTGGATCAACTTCCACTTACACACCCTGAACATATTGGGGTTACACCTGTAACAACCACTATTGTTCAAGGTCGTAgaagaaaacataaaaaaagttCTGGGGAAAGTGGTGAAGAAGAATCTTCAGCAATGGAGGAAAAAGATATTGGAAAAGTAGTTTGTGTAGAAGCTTATGACAAAAAGAAAGTAAGAGACAATTGGTTTCCTGGTTTGATAGTTGCACCCACTTCACAATCCTCAATCAAAACTAATGTTGAAAAAGACTACCTAGTTCGTTCATTTAAGGATGGAAAATAcTATACGGCAGTAAAAAAAGAAACTACTGAATTTACAAAAGAAATTGGTGCTAGAGTGGAAAATCCTACACTTAAAACTGccGTCGAAAAAGCCCTATTCTTTCTGGACAAAGACGAACTCCCATCACATTGGGATAGAGATTTATTATTTGGTgttaatagaatttttattgcaCGAAATAGTGAAGTATTTGATGGcaataattctGATGAAGAATCAATTGAAGAAAAAGATCATTTTGTCGcacagttatttaaatttatggatGATCGAGGAACTCCTCTTAATCAAGCTCCAGTCATTAATGAGAAAGATGTTGATTTATATAAACTCTTTAaggttgTCAATAATTGTGGAGggtataataaagtaaataaaggTCTACTATGGAAGTTTGTTGCAAATAAAGTTGGACATGAAGAACAGtcatttttttctgttaaaCATTGCTATGAACaATATTTAAATAGGTTTGAGGAATTTCATCGAAAACTCGGATGCACAATGTTGAGTCATCCAAGGGGAGGAAGATTGCACAGTAGATTTAGTCGCAGCCTTATTAGGGATGTTGATAAAGCTCTGCCTAGCACATCATCTGCGACTGATAAAAATAAGTGtgcaaaaaatgaattaaacaataaaaaagatAATGAGTCTACTGTAGATAAAAAAACAGCCAAAGCTATTCAAGCTGAAGCGAAACTTCTTAAGAACAATGAAAAAACTTCAAAGAaaggtgataaaaaaaaagatgttcCTAATAGTACATCACGtaataaacaatcagtgaaatgGGATCCAGATCTAACAGAAACAAAGGATCCAGTTAGAAATACTAAACCTagaaaagaaataaaagaaataaaaaaagaagtAAAAAAAGAGATAAATTCTGATACAGTAGATGATGATCAAATCAttgaagataaaaaaatagaaaaaaaaacatttccaaaaaatTTATTTGGAAAATCTGTGCAAAAAACTACTAACAAAGAAAAAGTTGTAAAAGTTAAATCTGCAAATACTGGTTTATCAGGATTGACTCCATTAAAAAAGTCTAAGAGAGGAACTTCTAATACCCTGCAAGATGCTTCAAATAAAGGAAAACTCGTTGAAGAAGTAccaaaaCTTACTCGATCAAAAACCAAAGAAGATTTACCTACTAAATCAAGGAGAGTATCAATATTAAATGATCTTGCTGACAGTGCTTCTGTGGTACAACTTACCCAGCCTGGACTTCTTGTAgaaaatctaattaaaattaaaaaagagggCAGAATTGAAAAGAAGAaaactcaaagaaaaaaaaagaactatAAAGAGGAAAAAGCGACCTCAAACGAAATAATTCCTATATCTATtaTTGAAAATGTTCCGTTTGATAAAAACTCACCAGTGCTTGTTGGAGATAATCTTGTAGTATACTACGGAGATAAACAAGCAACAACTTATGATGCAAAAGTTATTAATGTGTGTGATATTGAAGgtgtaatgaaatattatgtacattataaagGATGGAATTCACGTTATGATGAATGGATAGATGTAACGCGTATTGCTTATAAAACTAAGGATCCAGAACCAGGACCTGAAATAGATAATGATGtagatttttcaaaaagtaGTCCTTCAGAAcaaaaaaatGTGGATCCAAAGAAGGTACCATCAACAACTAATAGAACTAAAAGATCAGTCACTCCACTcccatcaaatttaaatattaaaaaatcacctTTTAGCAGTGCTCGACCTATAAGATCATGTACTTTGACCGATCGTCCATTATTCGATAttgatatttctgATTCGGAAGAAGAATACACTGCAATTGTAGGACCAACAAAACAATATAGTAAGAAAAAAGTCATAAAATCTGAACCAGGTGTTGGTATTATTAAAACTGAGCCGTCAGACACTGATAATCAGAAAAAGACACTATATCCGAAGACATATCCCAGTAAAGAAGTACTTATGAATCGaagtgcactaagaaaacaAAAGTCATGTGTGTTTAATGTTAATAGCATTAAATCTGAAGAAGTTAAGGTTTGTGAACCAGTTACTCTTGAACCggcatttgattttaattttgtgatGCAACTACCAAGTATAAAACCAAATGAAGTTAATGAAAATGTAGAAGCAAAGAACAAAAGTAAAATTGACaatgctataaaaattgaaccaAAAATTGCCCCCAATCATTATTTGTCACCTAGAGAAAAATCTGAAAGAAATTATCTAGAACATAATATGTCTGAATCCTCAAAAAGTCGGAATGAAGAAATCAGAATTAAATCCAAACTGTTTACAATTTCAACTATGTCGGAAATTCCAAGTATTGTCAATTACTCAACGTCTTCTGATGAAGAAAATcaatttgaaaaagtaaatgATTTCATTTCTTCTCCATTAGATGATAAATCtaacaaatctaaaatatctggTGCCGATTTTGATCTTAACAAAATAAGATCAGAAATGAAGGGACTAATGCCAACATCAACAaatagtaatgatattattcaaaatacagAATCATTCATATTAGATCAACAAATAGAGATTGaagtttcaaaaattaatcaACCAATCACAGATgatgtttatgaatttaaagAATCTGAATCatgcaattttaatacaatttcttCTGTCACTGAAGAAAAAATCTGTAGATCTATTAGACATGACTCTCCAAGATTATTTAACGTTGAGAAATCTGATGAACAATCAAAAGTTCCTTATACTCCAGCACAAGAGGAACTAGTTGAACAAAATGGGTCCATGATACCATTTGTCCCTAACAGCAATAgcttttattcatctgataataatggtaaaataaaagttaatgaaaatttgaacattattaaTGAAATCAAAAATCCAATTATGAGAAATCAATCTGACAATGAGTCTAATGAATCCCAAAacttaatgataaattatgCTACGGTAGATACGccaaatataaaagaaattgaGCCACATTTTCACGATGAATCTGTTTCCGATTTAAAAGATGAAGTTTTGGATTTATGCATGAAACCACCTGAATCACCACCTACCAACATTTTTAGTATGCCAGAGCAAAATGAACTCAATGGTATGGTCATTGAAgaagatgatgatgatgaagatgATGATGAACCAAAATTGGTAATAgctgaaaatgataaaatagaaACTGATTATCAAATGGATTCTGATCTTGTGGTTATTAGCGAAGAACATAATTCTTCCAATGGACAAATTGACGAAGACATAGAAACAAATTCCCTGCCACCACTACCACCGAGTGTACACACTAATATTGAATTAGAGTGCAAAAGTTCATCTCAAGTTAAAAAAGATATAAGTATACCAAAAGATACAGATGATGAAAGTACTACATCTTGTAATGAAAGCATTCAAAATGCTCTTATTCAAAGTTTCCAAATGTATTCACATTTTGAAAACCATTCAAGTCAAAATAGACTTTATATGGATAATATTGACGAAACCCAAAAATCTGGTTTTGAATTTGATTCAAATTCAAGATCGCCTACAGATGAAGATAGAGAAATTGTTGAATCTGGAACTAAGCTTTCCATTAATGAACCTTCAATTAATGGTAAGcctaaaaaatgtgattttgaaGTCGAAagtgtaaaagtaaaatttgagAAAGAAAAAACTATGGTGCTACCAGAATTGCAATGTAGAGAAGAAATAGTAGATGAAGATACTCTCAATAATGCTTTAGTTATAGAGTACAATCTTAAAGCTGCAGAATATGACATTCATAAGCCTAGTACTAGTAAAGGTTTCTTTGATTCGATACATCAACCAGGTACAAGCAAAGATAGTTTCTATGAAACTGACACTAGTAgtgatataaaaaatagtttcttTGAAGCTAGACAAACAgtcaaaaatgtgatttttgatACAAACATTCCTGGAAAAAGAAGTTTATTTGATACCAATATTCCTAGTTGCAGTAGCAAAGATTTCTATGATCATAATATTCCAAGTACCAGCAAAAGCAGTTTTTATGAAAACTGTTTGCCTAGTACTAGCAAAAGTTTTTATAATCCTGAATCTGATGTAAATAGTGTTCTATTTTGTGAAGAAACCATACCAGGCAGTCCAACTGGTACATCAGAAGAACAATATGATcaagaaaaaagaaataaagcTCTTCAAGTACTTTATGAAGAAAGAGAAGCGGCTTCAGCTATGTATGCTATGAATCAATCTTTTCATAGaccaatgattacattgatggGTGCTACGGAAGAAGAAATGGAAGAATATACTAATATTCTACAAAAAGATGGTGCAATACTTGATCAAAGACATTTACAGTTCTTAGCTGAGGTTTCTAGTAGGAATcttggtataaatataaatgaaccATCAGTTACGGAATCACTTGAAAGAGAACCAGAGACAACAGTTGAGAAAGTAGTTAAGCCACCAGAAAAACTACAATCCAAGCGCAGAATTAGCAGTCATGAACAACCATCAAAACGCTGTAAATTGtctactactactactgctCCTATACCTTCagtaaCTCATGTTAAAAAATCAGATGAAGaagaattattatatgaaatacctATAAGAGATGGCCAACCATTGGTCGTATACActCCAGGTATGAACTCAGCTCAAAGGCAAGCTGTTATAATAGCCAAAATGAATGAACTACGAGAAGAATTTAGTACAGTGAAAGCTAGTGGTGCTAGCAcatctaaataa
Protein Sequence
MNEVYYMYLLVIPLTLKMEAHLDEPPFFVVGTDVSAKYKGAFCEAKIQKVSKNVKCKVQYSNGISTFVTDDAVKGQLKVGATVTILCSKKKKLLRATIQKIQDCSQYTVVFDDGDVACLKRTALCLKSGRHFAASATLDQLPLTHPEHIGVTPVTTTIVQGRRRKHKKSSGESGEEESSAMEEKDIGKVVCVEAYDKKKVRDNWFPGLIVAPTSQSSIKTNVEKDYLVRSFKDGKYYTAVKKETTEFTKEIGARVENPTLKTAVEKALFFLDKDELPSHWDRDLLFGVNRIFIARNSEVFDGNNSDEESIEEKDHFVAQLFKFMDDRGTPLNQAPVINEKDVDLYKLFKVVNNCGGYNKVNKGLLWKFVANKVGHEEQSFFSVKHCYEQYLNRFEEFHRKLGCTMLSHPRGGRLHSRFSRSLIRDVDKALPSTSSATDKNKCAKNELNNKKDNESTVDKKTAKAIQAEAKLLKNNEKTSKKGDKKKDVPNSTSRNKQSVKWDPDLTETKDPVRNTKPRKEIKEIKKEVKKEINSDTVDDDQIIEDKKIEKKTFPKNLFGKSVQKTTNKEKVVKVKSANTGLSGLTPLKKSKRGTSNTLQDASNKGKLVEEVPKLTRSKTKEDLPTKSRRVSILNDLADSASVVQLTQPGLLVENLIKIKKEGRIEKKKTQRKKKNYKEEKATSNEIIPISIIENVPFDKNSPVLVGDNLVVYYGDKQATTYDAKVINVCDIEGVMKYYVHYKGWNSRYDEWIDVTRIAYKTKDPEPGPEIDNDVDFSKSSPSEQKNVDPKKVPSTTNRTKRSVTPLPSNLNIKKSPFSSARPIRSCTLTDRPLFDIDISDSEEEYTAIVGPTKQYSKKKVIKSEPGVGIIKTEPSDTDNQKKTLYPKTYPSKEVLMNRSALRKQKSCVFNVNSIKSEEVKVCEPVTLEPAFDFNFVMQLPSIKPNEVNENVEAKNKSKIDNAIKIEPKIAPNHYLSPREKSERNYLEHNMSESSKSRNEEIRIKSKLFTISTMSEIPSIVNYSTSSDEENQFEKVNDFISSPLDDKSNKSKISGADFDLNKIRSEMKGLMPTSTNSNDIIQNTESFILDQQIEIEVSKINQPITDDVYEFKESESCNFNTISSVTEEKICRSIRHDSPRLFNVEKSDEQSKVPYTPAQEELVEQNGSMIPFVPNSNSFYSSDNNGKIKVNENLNIINEIKNPIMRNQSDNESNESQNLMINYATVDTPNIKEIEPHFHDESVSDLKDEVLDLCMKPPESPPTNIFSMPEQNELNGMVIEEDDDDEDDDEPKLVIAENDKIETDYQMDSDLVVISEEHNSSNGQIDEDIETNSLPPLPPSVHTNIELECKSSSQVKKDISIPKDTDDESTTSCNESIQNALIQSFQMYSHFENHSSQNRLYMDNIDETQKSGFEFDSNSRSPTDEDREIVESGTKLSINEPSINGKPKKCDFEVESVKVKFEKEKTMVLPELQCREEIVDEDTLNNALVIEYNLKAAEYDIHKPSTSKGFFDSIHQPGTSKDSFYETDTSSDIKNSFFEARQTVKNVIFDTNIPGKRSLFDTNIPSCSSKDFYDHNIPSTSKSSFYENCLPSTSKSFYNPESDVNSVLFCEETIPGSPTGTSEEQYDQEKRNKALQVLYEEREAASAMYAMNQSFHRPMITLMGATEEEMEEYTNILQKDGAILDQRHLQFLAEVSSRNLGININEPSVTESLEREPETTVEKVVKPPEKLQSKRRISSHEQPSKRCKLSTTTTAPIPSVTHVKKSDEEELLYEIPIRDGQPLVVYTPGMNSAQRQAVIIAKMNELREEFSTVKASGASTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018795;
90% Identity
-
80% Identity
-