Basic Information

Insect: Macrophya annulata
Gene Symbol: -
Assembly: GCA_963924015.1
Location: OZ001260.1:7269854-7272251[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.3 5.5e+02 2.0 1.5 1 23 283 305 283 305 0.96

2 8 0.0033 0.34 12.1 0.5 2 23 350 372 349 372 0.96

3 8 4.7e-05 0.0049 17.9 1.5 1 22 438 459 438 459 0.95

4 8 0.021 2.2 9.5 6.6 1 23 472 494 472 494 0.98

5 8 0.018 1.8 9.8 2.2 1 23 500 522 500 522 0.97

6 8 4.6e-06 0.00047 21.1 1.1 1 23 528 550 528 550 0.97

7 8 0.018 1.9 9.8 2.8 1 23 556 579 556 579 0.97

8 8 3e-05 0.0031 18.5 0.3 1 22 585 606 585 606 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.3	5.5e+02	2.0	1.5	1	23	283	305	283	305	0.96
2	8	0.0033	0.34	12.1	0.5	2	23	350	372	349	372	0.96
3	8	4.7e-05	0.0049	17.9	1.5	1	22	438	459	438	459	0.95
4	8	0.021	2.2	9.5	6.6	1	23	472	494	472	494	0.98
5	8	0.018	1.8	9.8	2.2	1	23	500	522	500	522	0.97
6	8	4.6e-06	0.00047	21.1	1.1	1	23	528	550	528	550	0.97
7	8	0.018	1.9	9.8	2.8	1	23	556	579	556	579	0.97
8	8	3e-05	0.0031	18.5	0.3	1	22	585	606	585	606	0.97

Sequence Information

Coding Sequence: ATGGACAggattaaatatgaaaatactgAAGTAGCTGAGGAGATTGAAACCGTCTGTACTGAACCAGCCCCATTATCTGTAACTTGTAAAATTCCAAGATCAGAACAGAGTTCGAAATTTTCTAGAATAATATCCGGATCTACTGATTATACGTCGCTTTGTAGACTTTGTGCAACTAGAAGCAATTCCATGGTTCATATGTTCTGCCAGAATGaattgcaaaataatattatagaaaagattgaatattgcCTTCCTATTGAGGTAAAGAAGACCGATACTCTACCAAAAGAAATTTGCCACTTGTGTCTAGAGAAACTTGAACTGTGTTATCAATTTCATAAAACCGTAGAAGCCGCTGCAAAacagtttcttattttcgatGATGGACAATGTAATGAGGGACAATATAAATCTTTCACCAACTGGGATGCGCATGGTAACATAATCATGCAAAAACTACGTAAAACGGATACTGAAACTCTGGAAAATAGcactattttatcaaattcaatGCTTCGAAAAGAAATGTATCATACAAATAGACCAAACGAAGAAAGCAAGATGGAGAgttcttgtaattttttactgaGTTTCCCTCTGCACATATGGAATGATATGGAAGAAAAActaagattcgaaataaagcCGAGTCAGAGAGAAGAGGCCAGCACTGATAAGAACGACGATGATATTGTCGTTCGTGAAGAGGTGTTCAATAAACGAAGATCAGTTGaggaaaatattattgataataaattaataaagtgccaaaattgcagaaaaaattttgagactgTAAATCAATGCTTCGCACATTCGTGTATTCATACCTTGAAAGATTACTTCCCTTGCTGTTTGTGTAGTGCGATTATTCGAACTAAAGAGGACACTGATAAACACAGGCTGAAGcataaaaaagatgaaaatttaagaaGAGGAGCACAGACCAGTAGCGGTAATCAATTTCCAAATAAATCTCTCAGAGAGGCAAAATTGAAGGCTCAAATAAAACTGAACAGCATGATCAGTAATGAAAATGAGTTATACTgtaaaaaatgcaataaagATATCAATCCGGAGACATCTCTACGTCAGCACATGCTCACTGTACATGAACAGCAAAAGAACTCATTTCATAACATATGTGAAAGGGAGTTAAGATGTGAAGAGTTTTGTTGTGCCCCAATCTCCGCTAAATTAGTAGATTTGCCAAAGGCTGATCATCGATTTATTGTATCTCAAATTCCACTTGTATTTTACAGTGCATCGGATCAGCTTATTACTCTTCAGAGTAAACGTGATTGTAATTTCGAATGCAAATTGTGCAGTAAAAGATTTAGCTCAAATTATACACTGGAAGTGCACAAGAAGACTGACTGCAATAAGACTCTGGTATCGACGCAAAAGACATTTTCATGCATGTACTGTGAACGAAGATTCCAACACaAAGGACATCGGAATTCTCATATTAGCACACACACTGGAGAACGTCCCTATGATTGTGACTTGTGCGGTAAATTGTTCAGAATGAAAATCCACAGAGATTCTCATCGTAGAATACACACGGGCGATAAACCGTTCAAATGTTCAAAATGCGAAAAGAGGTTTACCACGGCTTCTGGGCTGCTTCGTCATTCTTTAATTCATTTGGATACTACGCCATATAGTTGTCACCTGTGCCGATTATCGTTTAAAACATTGAAAGCAAGAGATTCACACTTGAGAATACAACACACAGGTGAAAGACCGTACAAGTGCGATATTTGCGGTGTGGGCTACACGACAAACTCGCGTTTGCTACGTCATACAAGAACTAAGTCATGTCTAAAGACATTGGCTGCTCAGAGTCAAATGTACACATGA
Protein Sequence: MDRIKYENTEVAEEIETVCTEPAPLSVTCKIPRSEQSSKFSRIISGSTDYTSLCRLCATRSNSMVHMFCQNELQNNIIEKIEYCLPIEVKKTDTLPKEICHLCLEKLELCYQFHKTVEAAAKQFLIFDDGQCNEGQYKSFTNWDAHGNIIMQKLRKTDTETLENSTILSNSMLRKEMYHTNRPNEESKMESSCNFLLSFPLHIWNDMEEKLRFEIKPSQREEASTDKNDDDIVVREEVFNKRRSVEENIIDNKLIKCQNCRKNFETVNQCFAHSCIHTLKDYFPCCLCSAIIRTKEDTDKHRLKHKKDENLRRGAQTSSGNQFPNKSLREAKLKAQIKLNSMISNENELYCKKCNKDINPETSLRQHMLTVHEQQKNSFHNICERELRCEEFCCAPISAKLVDLPKADHRFIVSQIPLVFYSASDQLITLQSKRDCNFECKLCSKRFSSNYTLEVHKKTDCNKTLVSTQKTFSCMYCERRFQHKGHRNSHISTHTGERPYDCDLCGKLFRMKIHRDSHRRIHTGDKPFKCSKCEKRFTTASGLLRHSLIHLDTTPYSCHLCRLSFKTLKARDSHLRIQHTGERPYKCDICGVGYTTNSRLLRHTRTKSCLKTLAAQSQMYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -