Mann000746.1
Basic Information
- Insect
- Macrophya annulata
- Gene Symbol
- -
- Assembly
- GCA_963924015.1
- Location
- OZ001257.1:7286216-7295411[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0015 0.16 13.2 1.9 2 21 200 219 199 220 0.94 2 14 0.016 1.7 9.9 0.1 1 19 764 782 764 783 0.94 3 14 0.024 2.5 9.4 1.8 3 23 794 814 792 814 0.97 4 14 0.00093 0.096 13.8 1.4 1 23 823 846 823 846 0.91 5 14 0.0025 0.26 12.5 3.3 1 23 927 949 927 949 0.98 6 14 4.3 4.5e+02 2.3 2.8 1 22 961 982 961 984 0.87 7 14 0.0068 0.71 11.1 0.9 1 23 1164 1186 1164 1186 0.95 8 14 0.055 5.7 8.2 0.3 2 20 1256 1274 1255 1276 0.89 9 14 0.0026 0.27 12.4 0.4 2 23 1284 1306 1283 1306 0.96 10 14 0.0081 0.84 10.9 0.6 2 23 1861 1882 1860 1882 0.97 11 14 0.007 0.72 11.1 0.2 2 20 1887 1905 1886 1908 0.94 12 14 9.5 9.8e+02 1.2 0.2 2 23 1963 1985 1962 1985 0.93 13 14 0.00011 0.011 16.8 1.1 1 23 1988 2010 1988 2010 0.98 14 14 0.011 1.2 10.4 1.2 2 23 2019 2040 2019 2040 0.97
Sequence Information
- Coding Sequence
- ATGGCTCGGTCTTTCGTATACAAGAGGTCTTTGGATGCCAAGATATTGCCAAACGCCGAACGTTCGAACCACGAATTCCAATTTATCAAATTGTtggagataaagaaagaagtgGAAAATGAACCGTTGGATATGAAAAGTGCCCAACCTTCTGACGAAACAACTAGCAATTCAAATGACATCCACGATGATGACTATCGTGAACTTCAGTCAGCTGATACATCCGGACAGTTTACGGAGAGCAAGGAGGGTCCACCTCCAAAGCTTGTGATAAAATTTAGCGATCTTTGGAAAAAAtcagaacaaaaatttgactattctagaaaaagaaaaagaagtaaagacACCGAGTTAGAAAATGAATTACTAACTTTACATAAACTAAGAGGTAATAAAAGGCGTACATCACGGTTGAATGTTTCATCAGAAAATGGTATGACCCGGTCTTCGTTATCAATGCGAAGATCTTTAGACTGCAGTCGAAGAACCAAGAGTACATCTGATTGTTCGCAACAAAAACCAGCCTTCGACAAAGAAGAGAACCAAGATGTTTTGAATAATAGGCGGAAAACTCCGTTAAATAGGACCCCACCTATAAAATGCGAAAGCTGTGGGATGTGTTTTAGAAGCAGTACTAAATTGCAAGCACATAAACGCTATTACTCTGCCGATGGAGAATTTCATTGCACTATTTATAATGATACAGATTCTATCGAAGATCCGAGTGCAGGATCAGTTATAAATTTGTATGACAAAAATGAACACCAGATTAATGAAGATTTAATAGTGCAACAGAATAAGCATCCAGGTTGCCTACTCACCGAAGATAATCTAGATTTTAACAACAAAAGAGCTGTCGTAAGTTCAAATCAAGATCTGATAAACAACGATCATTcagaaagaatgaaaacagCGATTCTAgaaaaatctgttgaaaaagaAGTGACAACACGACAAGACATTTTGGTTCTAATTAACAATTCAACCAAAAAGCCGATCGAACTTGGAGATGTTCAAGAAAGAATCAACGAAGCTCCGTTAAGATCAAGGCCAGAATTATCCGCGAAAAATCCAGAGGTTCCAAGTTCACAAAAGCCTGAAACAGAGAGAATCCAAATGCACCGTAGGAGCCAGAGAGGCTTAGCAATCATGTCAGAAAGTGTTCAACTACAATCAGTGGGATTTTCGGTAGATTACATGAGAAATACAGACAGTAACGGGGGTGTATTCGAACCATATGACCAGCCATATAAACCTGATAATGTCTCTGGCAGTAGCGATGCAAGTTATACTGCTGATCTTGCTGATAAGAACCCGAAGATCGAAATTGCTGATTTGTTTCAATGCACAAGAAGAAGTACTCTAAAAGCGACGACATTGAATAGCCCTATCGCGAATATCACGGATACTGCTACATGCTCAAACCCGAAGTTAATGCAGAATGAAGACTTATCTTTCtatgaaaaaagtataaatactGCGGAAGAAAATTACAGTGTTAATGAAAGACTGAGGCTTTTACCACAACATCAACAATTGGAGAAACAGGTAGGTCCAGTTTCATCGGATCCGGTAACAGAGGATCCTGAGAGCGCAGGAAGGAATGTCGGTGCTGAAGATGCAGTTAtgaaatgtaataattttgatatggATCTAATTCAAGTCGATGATTTTGGAGAGATGTGTAAGTCGAGTTTCGTTAAAATAGAGGATGGAGAGCTGAGTGATGGTAGCTGTGAATCGATTTCTCTTAGTATGACTGCTTCTTCctcaaatatttcattgcCAAAGTCGTTGGCCCTTGAATCTCGTAATTTAACCACTccaaataatttgaatgatcCGAATGATCCGAAAATCAAAGACGTAAGAGTTTTATTGGTAAAACTAGAGAACATGGTGAATTTATcgcttaaaaaaaatccttcagAATCATCCCCACTTGTTGACTATAATTTAGTAAAAACTGAAACACCTTATTGCGAACCGTGCGAGAAAGAGTCTGTAGATAATCGAGAATTACGGCAATATTCTGGATGCGAAAATAATGGTGAGGGAGATAGCGAAGTTGAGATAAATACGATTAATAAAGAGGTCAACACAGTAAGTAAGCAGCTTTCCGAAAGTATTGAGGATCCAGGGCAAACTGAAATTGTTTGTactgattcaaattttgaaacaaatatcGCAACCATTCGAGAAGATGTAACCGAAATAGATCAGGACcgagaaataaatgaagacgTGGCGGTAGTAGGTCAGAAAATCAGGACACATACTTCAAGTGAATATAAATGTGGCATATGCAAGCTAAGCTTTAAAGACCCGTATGCTATACTTAATCACGAATGGGAATTTTCTAACGAAGGCACATTTGGATGTAATGTTTGTTATCGAAAGTTCATGACTTATTATCTTCTGAAGAATCACAAgattaaacattttcaaagaaacgTGGTTCGTAGTTACGAATGCTACATTTGCAAAGAGGATTTCTCTAGGGCTGATCATTTAAACATACATGGATTACATTTACACGGTCCTCAGTTTGTGCTAGAGAAAAGTTCTGAAACTGTTgatatttatgataaaaatacgTCAGAGTTTCAAATGAATCATGACAGTCACAGTGTTTTGAAGGAACATACCGTCGATGATAACTACGAACTAGTGGCAGGTTATAGAGTATCTCAAAGTGGAAAGattctatattttaaaaaaattggaaataatagGTCACCTGCAGAACTGTTGAGGCGACATTCAAACGAAGATGCCTATTGTTGTAATTTCTGTCAAACGAATTTTAGCACTGCAGTTTTACTAAGGGATCATGTTAAAAAACATACCTACCGTGCGTATTATACTAATTCATCAAGATATCTTTGTctgatttgtaaaaataaatttaggaCTAACGACATTTTGAGGGCTCACGTTGTACATTGTCATACGTCTGaaccaaaaaatcaaaatcttaGTGGGACGACAAATTCCCGTACTCAAAATAACGTGGGACGAACAGGTATTGACAAAGATGATAACGAAGTGGAGATCGTTGCCAAGAAGTTTCCTGCAgaatatgaaattcaaaacccGTCATGTAGTTCTGAAACATCTCATAGCATTCAACAATCAACCGATACTTCACCCACCGAACAAAGAAAATCATCCAATTCCACAAGCGGCGTTACCGTTTCCATTTTCCAAGTCCAATACAGAGTAGATAATCAGTTGAAATTCAATGACTTGGGTGGCAGTGATGATAGAAATTCCAATGGCTTGAAATCAGTGGAATCTGGTTTCTCTGAAATTAGTTCGGATTCGATTGACCCTAATTCAACACCGGAAGAAGTGAAGCTTTTTACCACAAGAGTAGAGGATGTGACGGGATTACAGAAGTACATGTGTATCGTTTGTATAGTCACATTTGACTCTGTTGTACAATTTAGAGAACATTTTGCTTCCACCCATGTTAAAAATGGGGCATATTTATGCACTttttgtgatgaaaaattctcagtCATGGTagacttgaaaaatcataCATCAAGACACGAGAAACAATCTAAGAATTATATATGTTGCGACGAAAAGTTTTTACTAGTGACAGACTTTGCCCGTCACTTATTATCACACGAGGAACAGactgaagaaaaacaaagtgAGCCAGCCACGCAGTTCTCGTCGTcagttgaatttgaaaatagctCTCTTAAGGTAATTGATGATGAATCAAATGTTAATACGACGGTTGACCCATGTAAATGTCCAATTTGCGATAAACCATTCCTAAACATTGATAATATGTTAAAGCATTGGGACTCTTGTGTTGATGCGAATGGCTTACAGTGTGATTTGTGTGGAGCGACGTTCAAGAGTCTGGATTCGATCAGATTACATAAAATGACCTACCATGAAGGGAAACAGAATGTTAATACTACACAAAATCCACGGGGCTCTCGAGTAAATGGTGATCCCATAATTCATGCTTCAACGCAAAGCAGTGTCATGGATGATATTAAGCTCGGAACGGTTGACAAGAGATTAAAGGTAAAAGCTAGGAAAAAATCGCAAAGAACTGTAACCTCAAGCGGAAAATTATCCAAACAGAATGAATTAGtaacatttgaaaatataacgaaGCAACCACTTGctaaaatattgcaaaatgtgaaaattaacAACGAACACCATGTCTATGAACATCAAAAGAATGATGCAACTAGAACAGGAACGGAATTCAGATCAAACCAAGGCAAACGTTTACCAAAACTGCGCAGCGTTCAAAAACTGCTTCCAAAAATGatatcaattgaaaattttgataaaaaaattcattgggaaTCGAACGGCAATTCAAGTACTCCAGTTTCCACTGTTCCTCGTTCGGTCAATTCAACTATAGAAGGTTATCAATCGGATGAAGAAGTTTCAAATGATATTCCATCCAATGCAAAGCGGAACCGTTCATCGCACCATCTACCAGATCAAACCGTTAAAAACGTTAGCAAGCAACATTTTACATCAAATGACTTCAATCTGAAACCTCCACAGAATGAGTATAAAGAACAAAGACTGCCAAGATCGCAACCAAACCTTTCGAGCACTGTTAAAAATTCAAGCCCTATTCAATCGACGTCTCATAGAGCTCTTAATATTGGTAACACGAGGGTTGTGTCAAGTGAATCTGGTAAAAAGCCTCGTTTAAACGATTGTGAGGATGAAAGACCATCGAAAGTATTACCATTATCTTTAAACGCTGTCGAAAATCCAGCCTATTACCTCTGCATTCAACCTGCACCCGATTGTTCTGATAATATGAACAATTTACCGCTTGTACCAAGTGATTccgttcaaaaaattcagtttgAACATGGCAATGGTACGGTGGTAACAAACTCTGTACCATTTCCGTTGAATCAGCCAACAGAGGCCAGGGATACGGTGCTACCAAACTTGGTACCATTTCCGTTGAATTCTGGGGCCGGTACAACTTATTACCTATGTCTGAAACCTATCCCTGATAATCACTCGAAGTCTGACACTCAAACAGTTTCATTAAATGATGCCAAGCGCAAGTCTCGGTCAAATAACCATAGCGGAAGAAATTTGCCAACGATACTAAAGAAATCCTCAACTCTTGTTCCTAATCCAATTCATCGTGGCGATATTCCACGGGTGCCTACTCATTCAAAAAGAAAGCATAAACGTAAGGTTGAACTAAGTAAACTTACCTCACAATCGCCTTCAGATGATATTATGCACATTAGACCACCGATACTTCTCCCTCCGTCTACGACTCCTCCTGTCCCTAGTACCTCAACTGGTGTTAAGTTACCTACATGCCATAAAGATGCAATGCCAGTTAGAACCATTTCTACAGATAAAAGTGATTCGccttcaaaatataataaatatactagACCGCTGATACTTCCCCCTTCTTCTCCTCTTGCACCTAGTACCTCAACTGGTGTTCAGTCACCTACATCTCATAAAAATGCAACACTGGATAGAACCATTCCTACAGACAAAAGTGCTTCCAATAAAGAACTTGTACCGACAAAGCAAGTTGTCCGATGCAGTTattgcaatttattatttacagagaAACTGAAATTAATTAGCCATATGGAAACGCATAAGACAGATAATCAATGTCCTGCATGTGggtttactttttcaaatgaaaaaggaCTTCAACAACATTTACCGGAACACAGAAGTTCGACGTGTACCAACTGCAACATGATCGTTTTCTTTAGCGATTCAGTTTCCATTCGTACAGGGGCACAGAGGTATTGTTCTGTGTGTAACACTTTACTGCCGAGACCAACACGAAAGCATAATCGttcatcaaaaaattcacCGCGTAAAGTAATGAAATGTGGTATTTGCATGGACACGTTTGGTACGATCTCTGAAATGACTGTTCACTTCAAGACTGTTCATTCAGCTTTTGTATGTGGTATTTGTGAATCTAGATTCAGTACGAAAAATCGTTTACAAAATCATATGCAGACTCACGGTAGCGGCAGTGGTGAATTACCTAAATGTGAaacgtgtaaaaaatatttcattcataaaattgaTCTGGCAGAACATGCATTGTCTCACTAA
- Protein Sequence
- MARSFVYKRSLDAKILPNAERSNHEFQFIKLLEIKKEVENEPLDMKSAQPSDETTSNSNDIHDDDYRELQSADTSGQFTESKEGPPPKLVIKFSDLWKKSEQKFDYSRKRKRSKDTELENELLTLHKLRGNKRRTSRLNVSSENGMTRSSLSMRRSLDCSRRTKSTSDCSQQKPAFDKEENQDVLNNRRKTPLNRTPPIKCESCGMCFRSSTKLQAHKRYYSADGEFHCTIYNDTDSIEDPSAGSVINLYDKNEHQINEDLIVQQNKHPGCLLTEDNLDFNNKRAVVSSNQDLINNDHSERMKTAILEKSVEKEVTTRQDILVLINNSTKKPIELGDVQERINEAPLRSRPELSAKNPEVPSSQKPETERIQMHRRSQRGLAIMSESVQLQSVGFSVDYMRNTDSNGGVFEPYDQPYKPDNVSGSSDASYTADLADKNPKIEIADLFQCTRRSTLKATTLNSPIANITDTATCSNPKLMQNEDLSFYEKSINTAEENYSVNERLRLLPQHQQLEKQVGPVSSDPVTEDPESAGRNVGAEDAVMKCNNFDMDLIQVDDFGEMCKSSFVKIEDGELSDGSCESISLSMTASSSNISLPKSLALESRNLTTPNNLNDPNDPKIKDVRVLLVKLENMVNLSLKKNPSESSPLVDYNLVKTETPYCEPCEKESVDNRELRQYSGCENNGEGDSEVEINTINKEVNTVSKQLSESIEDPGQTEIVCTDSNFETNIATIREDVTEIDQDREINEDVAVVGQKIRTHTSSEYKCGICKLSFKDPYAILNHEWEFSNEGTFGCNVCYRKFMTYYLLKNHKIKHFQRNVVRSYECYICKEDFSRADHLNIHGLHLHGPQFVLEKSSETVDIYDKNTSEFQMNHDSHSVLKEHTVDDNYELVAGYRVSQSGKILYFKKIGNNRSPAELLRRHSNEDAYCCNFCQTNFSTAVLLRDHVKKHTYRAYYTNSSRYLCLICKNKFRTNDILRAHVVHCHTSEPKNQNLSGTTNSRTQNNVGRTGIDKDDNEVEIVAKKFPAEYEIQNPSCSSETSHSIQQSTDTSPTEQRKSSNSTSGVTVSIFQVQYRVDNQLKFNDLGGSDDRNSNGLKSVESGFSEISSDSIDPNSTPEEVKLFTTRVEDVTGLQKYMCIVCIVTFDSVVQFREHFASTHVKNGAYLCTFCDEKFSVMVDLKNHTSRHEKQSKNYICCDEKFLLVTDFARHLLSHEEQTEEKQSEPATQFSSSVEFENSSLKVIDDESNVNTTVDPCKCPICDKPFLNIDNMLKHWDSCVDANGLQCDLCGATFKSLDSIRLHKMTYHEGKQNVNTTQNPRGSRVNGDPIIHASTQSSVMDDIKLGTVDKRLKVKARKKSQRTVTSSGKLSKQNELVTFENITKQPLAKILQNVKINNEHHVYEHQKNDATRTGTEFRSNQGKRLPKLRSVQKLLPKMISIENFDKKIHWESNGNSSTPVSTVPRSVNSTIEGYQSDEEVSNDIPSNAKRNRSSHHLPDQTVKNVSKQHFTSNDFNLKPPQNEYKEQRLPRSQPNLSSTVKNSSPIQSTSHRALNIGNTRVVSSESGKKPRLNDCEDERPSKVLPLSLNAVENPAYYLCIQPAPDCSDNMNNLPLVPSDSVQKIQFEHGNGTVVTNSVPFPLNQPTEARDTVLPNLVPFPLNSGAGTTYYLCLKPIPDNHSKSDTQTVSLNDAKRKSRSNNHSGRNLPTILKKSSTLVPNPIHRGDIPRVPTHSKRKHKRKVELSKLTSQSPSDDIMHIRPPILLPPSTTPPVPSTSTGVKLPTCHKDAMPVRTISTDKSDSPSKYNKYTRPLILPPSSPLAPSTSTGVQSPTSHKNATLDRTIPTDKSASNKELVPTKQVVRCSYCNLLFTEKLKLISHMETHKTDNQCPACGFTFSNEKGLQQHLPEHRSSTCTNCNMIVFFSDSVSIRTGAQRYCSVCNTLLPRPTRKHNRSSKNSPRKVMKCGICMDTFGTISEMTVHFKTVHSAFVCGICESRFSTKNRLQNHMQTHGSGSGELPKCETCKKYFIHKIDLAEHALSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -