Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_963924015.1
Location
OZ001257.1:36086971-36089645[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.41 42 5.5 0.1 2 13 129 140 128 151 0.79
2 14 0.14 15 7.0 0.5 2 23 156 178 155 178 0.91
3 14 0.088 9.2 7.6 1.6 3 23 233 253 231 253 0.95
4 14 8.6e-05 0.0089 17.1 1.0 1 20 291 310 291 312 0.94
5 14 0.18 19 6.6 7.2 1 23 321 343 321 343 0.96
6 14 0.0015 0.16 13.1 1.9 1 23 356 378 356 378 0.98
7 14 0.0002 0.021 15.9 1.8 1 23 386 409 386 409 0.95
8 14 3.7e-05 0.0038 18.2 3.9 1 23 415 437 415 437 0.97
9 14 0.022 2.3 9.5 0.6 1 23 440 463 440 463 0.90
10 14 0.0029 0.3 12.3 0.2 1 23 482 504 482 504 0.98
11 14 0.00047 0.049 14.7 0.9 1 23 510 532 510 532 0.98
12 14 1.6e-06 0.00016 22.5 4.8 1 23 537 559 537 559 0.97
13 14 9.5e-05 0.0098 16.9 5.7 1 23 567 589 567 589 0.98
14 14 0.00041 0.042 14.9 1.0 1 23 595 617 595 617 0.98

Sequence Information

Coding Sequence
atgaagaaagaaacacCAGAAACATGCCGTTTATGTGCTGAAATTGGTGTAGGTCATATTCCAATATTTGCAGAAAACAATTCTGCTGTTGCTGAGAAAATAAGCAGATGTTTACCAATAATTGTATTGTCAACAGACGAATTACCGCTGTTTGTATGTCAGAAATGTTTCTACTTTCTAAACATTAGTTACAAACTAATTGTTAATTCTGTAAAAGCTGATACTCTTCTGAGGGCTAAATTGAATGAACCGAGTGAATCGGATTCTTCAGAATATGAAAACAGCCCATGTACCGTAGTAGTTCAAATGCCGGTTAAAATTGATACTAGTcaagtatcaaaaaaatatatagaagatTTCAACTTGAGTTCAGGAGTTGCTATAAAATGTGATTTAtgcgataaaatatttgaggatttgaatatttttgatactCATGTTGAACAGGATCATCTTTCACTATGGCCTTGTAGTTTGTGCGACAATAGCTATGATGAGTCCAAAGATCTTTTAGCGCATAAAGAATTATGTCATGCGGGGCAAATTGTAGCTTGCCAGGATTGTGCTCGAGGAGAATTATCGTTGGATCATTCATTAAACGTTTCAAATACTGATACAACGGATTTATCAGATATTGGAGAAAGAACAGAGATTATAGAAGTAAAAGAATCAACAGCTAGTATTGATGAAGTATGCTGCAGTGTGTGCAAGCTTACTGTTGAAAATTCTAAGCTGCTTAGCAAACACAATAATATTCATGTACCAAAAATAGCTAGATGCCGTACCTGCCAAATACGATGTCATTccatttatgaattatttttacataaaaaggCGGCCCACAATATGTACAGAAgagtgaatttgaaattcatttgcgacatgtgtgataaatttttttcaaatacttctCAATGGCAACATCATATCGACAAATCTTGccctagaaaattttctgttcatGCTTGCAAGTACTGTAAAAGCATCTTCTCAACTAATCATAAACTTACATTTCATCTAAGAAAACATAAAAAGGAAATGTTGGATGATCCTAGTGTAACTGTATACAAATGTGTGGCGTGTCCTAAAGTATTTGTTGATCATCAATTCTATCAGAAACATAGAAATgTACATGATCCGGAATGCTGGGATAAGTTCAAGTGCACTCTTTGCAATCGATCTTTTAGAGACAGAGTTAGATTAAAGGAACACAATCAATCTATTCACGAAGGTGTGAAACCTCATCAGTGTGATGTTTGTGGTCGTATGTTTCATCGTTCATCTAACATGCGGGTACATAGAGCAAAACATTTTGGCCACAAGTGTACACATTGCGAAGAAGTATTTCAGAGTTTACGGCCACTTGCTGAACATGCACAGGCTGTTCAcggaattgaaattaatttgagaaCTCAAGCAAAAAGAGATTACAACAACAGCTGCTACGTTTGTAGATTTTGTGGTAAAACTTTGGCCACAAATCAGTCTGTTGTTGATCATGAACGAATCCACACTGGTGAAAAACCCTACAGCTGTAATCTGTGCGAAAAAACCTTCAGAAGTTACACTGCAAGATGGGCTCATGTACAACGTCATCAAAAAGGGAACTTCATATGTGAACACTGTGGCAAATGTTTCAGTTATAAGCAGAACTTGACTACCCACGTGCAGATACATGTCCCTGTTGAAGAGCGCAAGCACCAATGTACAAAATGCAGTAAACGTTTTTTAAGAAAAGCACATCTTAATGTACACATGCGAATTCACGACGGAGTTCGTCCATATACTTGTGACATATGCTTATTTAGATTTACGCAACTTGGTGATATGAGACGACATCGTGCTAGACATGCGAATGGTGACGTTCGTGTCAGAAAACCGCGTAATAAATCGGTAATAAATTCAAGCAACGAAGATTCTGCTTAG
Protein Sequence
MKKETPETCRLCAEIGVGHIPIFAENNSAVAEKISRCLPIIVLSTDELPLFVCQKCFYFLNISYKLIVNSVKADTLLRAKLNEPSESDSSEYENSPCTVVVQMPVKIDTSQVSKKYIEDFNLSSGVAIKCDLCDKIFEDLNIFDTHVEQDHLSLWPCSLCDNSYDESKDLLAHKELCHAGQIVACQDCARGELSLDHSLNVSNTDTTDLSDIGERTEIIEVKESTASIDEVCCSVCKLTVENSKLLSKHNNIHVPKIARCRTCQIRCHSIYELFLHKKAAHNMYRRVNLKFICDMCDKFFSNTSQWQHHIDKSCPRKFSVHACKYCKSIFSTNHKLTFHLRKHKKEMLDDPSVTVYKCVACPKVFVDHQFYQKHRNVHDPECWDKFKCTLCNRSFRDRVRLKEHNQSIHEGVKPHQCDVCGRMFHRSSNMRVHRAKHFGHKCTHCEEVFQSLRPLAEHAQAVHGIEINLRTQAKRDYNNSCYVCRFCGKTLATNQSVVDHERIHTGEKPYSCNLCEKTFRSYTARWAHVQRHQKGNFICEHCGKCFSYKQNLTTHVQIHVPVEERKHQCTKCSKRFLRKAHLNVHMRIHDGVRPYTCDICLFRFTQLGDMRRHRARHANGDVRVRKPRNKSVINSSNEDSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00060582;
90% Identity
iTF_01412583;
80% Identity
-