Basic Information

Insect: Macrophya annulata
Gene Symbol: -
Assembly: GCA_963924015.1
Location: OZ001257.1:4328440-4330888[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00026 0.027 15.5 1.6 1 23 297 319 297 319 0.97

2 12 0.00091 0.095 13.8 4.6 1 23 323 345 323 345 0.98

3 12 0.00031 0.032 15.3 2.9 1 23 350 372 350 372 0.96

4 12 0.0013 0.14 13.3 3.3 1 23 423 445 423 445 0.97

5 12 0.00095 0.098 13.8 1.4 1 23 450 472 450 472 0.97

6 12 0.00034 0.036 15.2 2.3 1 23 522 544 522 544 0.98

7 12 0.0005 0.052 14.7 1.5 2 23 552 573 552 573 0.98

8 12 1.2e-06 0.00012 22.9 2.1 1 23 584 606 584 606 0.96

9 12 0.00014 0.014 16.4 1.2 1 23 612 634 612 634 0.97

10 12 0.00019 0.02 16.0 0.7 1 23 640 662 640 662 0.98

11 12 5.7e-06 0.00059 20.8 2.0 1 23 668 690 668 690 0.96

12 12 0.0001 0.011 16.8 0.3 1 22 696 717 696 717 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00026	0.027	15.5	1.6	1	23	297	319	297	319	0.97
2	12	0.00091	0.095	13.8	4.6	1	23	323	345	323	345	0.98
3	12	0.00031	0.032	15.3	2.9	1	23	350	372	350	372	0.96
4	12	0.0013	0.14	13.3	3.3	1	23	423	445	423	445	0.97
5	12	0.00095	0.098	13.8	1.4	1	23	450	472	450	472	0.97
6	12	0.00034	0.036	15.2	2.3	1	23	522	544	522	544	0.98
7	12	0.0005	0.052	14.7	1.5	2	23	552	573	552	573	0.98
8	12	1.2e-06	0.00012	22.9	2.1	1	23	584	606	584	606	0.96
9	12	0.00014	0.014	16.4	1.2	1	23	612	634	612	634	0.97
10	12	0.00019	0.02	16.0	0.7	1	23	640	662	640	662	0.98
11	12	5.7e-06	0.00059	20.8	2.0	1	23	668	690	668	690	0.96
12	12	0.0001	0.011	16.8	0.3	1	22	696	717	696	717	0.96

Sequence Information

Coding Sequence: ATGACGATGAATTCAAACTACTTTGGCTTGCCGCTTAATCTAGACAGAGCATGTAGAGTATGTCTTTCGGAAAGTACCAATTTGACGTCGATATTTTGCTCCGATCCAGAAGCAGATGATTTTGCTGgactttatcaaaaaatacaaGTTTGTGGATCTATTGAAATCCAGGAACAAGATGGCCTGCCTTCATTAATCTGTGAAGTCTGTATCTACAAGGCAACTGTTGCTCATGATTTTAGACAACAGTGTCAACACTCTGATGCTCGATTGCGATTGTATTACAATAAACCAGCAAAGTCTAACGTCACGgATTCCAGCACCCAAACGGATCCCCAAACGCGAATAGTTCTGACAAAGAAAGTGTCGAGTCCTCAAGagaattattttgttaaacaaGAAATGCAGTCTGCAAATGCTCAGGAGTTTGCAAGTAcaaatgaaacattttcacGGTCAGAATCCTGCGTTGAGGAAAATAAAGTAACCGAAGAAACTATGGAAGAGAAtaagatttttatatgtaaCATTGGGTTTGAAGGAAGCAAGGACGAGGAGGGTGCAGGAACATTGGAAGAGACCACTCATCATTCTCCATTTCCACAAAGAGAGTTAGCAGAGGCTGGGGAACTGGTGACTATGGAAGAAAAGGAGATAGAGTTACacgaagaaaaacaagaagagaTAAAAAGCAACGATATGTTAGAAGAAGAATACCTCGTAGTTGGTTTGCTAAACGATAATACAGAGGAGGAAGATAAACCCCCTACTAAACGAACCTATAGTAGAAAGGCGAAATCTTTACCGGCAAAAAGCTACAGCGACGATGAAGTTAACGATGATTATTACGAGCCAAGTAGTGACAGTCAAGACTCTGatgtaatgaaattcaaatgtaAAGTATGCTTGAAAAGATACGCGACCCAGAAGGGGTTGAAGAAACATTCCCTTGTTCACGACAAAAAACACAAATGCAATATCTgtttcaagatgttttacaaGCTTGAAAATATGGAGAAACACAAAAAGATTCATGCCTCTAAACCGCACGCTTGCCAATTGTGCCACGCGTCTTTTTCAAAACCACAAAGTTTAGTACGCCACTTGAAATCTCATACAGAAAAAGTAAACGACATTATTAAACAGATTAATAATGATGATCCAAACGAGAAATGTCAAAAAAGGGAACTTACAAAAGAGGATGATACGGACGACGAAATCGGAACTATTAATGAACCAGACGAATTTGAAAACGCTCCGGAATTATATAAATGTCAAGAATGCAGCCAGTACTGTTCTTCattgaagaatttgaaaagacACGGGCTTGTTCATggggacaaaaaatattcttgtaCTGTTTGTAAGAAATGGTTTTTCAGACCAGACACTTTGAAAAAACACGCTGAGAAACACGGTCATGGTTTGCTGGACAATTTGATCGAGGATAACAAGTTGTTTGATTCTGACGACGATTCGTTTCCTAATCAGagtgaaaatttaacaacAAGTAACAGCGATAGTGTGAAAAAAGACGGAAGCGACGAAGATGGCGGTGGGGAATACAAATGCCAACATTGTGATAAGATTATGGCAACAAAAAAGGGGCTAAGACGTCACGTTTCTATGCATAAGCCAAAAGCCGAGCCAGCAACGTGTGAAATATGCAAAAAGGTTTGCGCAAGCCAAGCCAGACTCGCTCTTCATCAGAAAACACATAATAAACCAAAGGAAAAAGTCCCTCGTGAATATCTTTGCCATATTTGCAGCAAAGTATATCCAAGCAACTCGTCCCTAACTTATCACATGAGAACTCACACCGGGGTCAAACCACATGTTTGTAAAATATGCAACAGTGGTTTTACCACAACAACAAGCTTGGCTAATCATCTTCGCATACATACAGGCGACAAACCGTTTGTTTGCCACGTTTGTAGTGCAGCATTCGCCGTTAGCTCAGCTTTTAGACGCCACTTGACTCGGCATACTGGAGAAGCTAATTATCTATGCAAAACATGCGGTAAAGCTTTTAAGAGACTTAGCACATTGAAGGAACACACTTATACTCATTCAGGTGAAAAACCTTACGTTTGTAAGACTTGCGGAGCAGCTTATAGTCACAGTGGGAGTTTGTTTGCTCATCAAAAACGTTGTAGAGCTCAATATGGAGAGATTGGATTAGTCGAGGAACATCATCACGCAGTTGCGCATCATATTCATGTTAATAATGTCCAATCTGCTGTTAGATCCCTCGCTGTAATTGGTCAGATGTtctaa
Protein Sequence: MTMNSNYFGLPLNLDRACRVCLSESTNLTSIFCSDPEADDFAGLYQKIQVCGSIEIQEQDGLPSLICEVCIYKATVAHDFRQQCQHSDARLRLYYNKPAKSNVTDSSTQTDPQTRIVLTKKVSSPQENYFVKQEMQSANAQEFASTNETFSRSESCVEENKVTEETMEENKIFICNIGFEGSKDEEGAGTLEETTHHSPFPQRELAEAGELVTMEEKEIELHEEKQEEIKSNDMLEEEYLVVGLLNDNTEEEDKPPTKRTYSRKAKSLPAKSYSDDEVNDDYYEPSSDSQDSDVMKFKCKVCLKRYATQKGLKKHSLVHDKKHKCNICFKMFYKLENMEKHKKIHASKPHACQLCHASFSKPQSLVRHLKSHTEKVNDIIKQINNDDPNEKCQKRELTKEDDTDDEIGTINEPDEFENAPELYKCQECSQYCSSLKNLKRHGLVHGDKKYSCTVCKKWFFRPDTLKKHAEKHGHGLLDNLIEDNKLFDSDDDSFPNQSENLTTSNSDSVKKDGSDEDGGGEYKCQHCDKIMATKKGLRRHVSMHKPKAEPATCEICKKVCASQARLALHQKTHNKPKEKVPREYLCHICSKVYPSNSSLTYHMRTHTGVKPHVCKICNSGFTTTTSLANHLRIHTGDKPFVCHVCSAAFAVSSAFRRHLTRHTGEANYLCKTCGKAFKRLSTLKEHTYTHSGEKPYVCKTCGAAYSHSGSLFAHQKRCRAQYGEIGLVEEHHHAVAHHIHVNNVQSAVRSLAVIGQMF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718825;
90% Identity: iTF_01413634;
80% Identity: -