Basic Information

Insect: Macrophya annulata
Gene Symbol: PRDM15
Assembly: GCA_963924015.1
Location: OZ001261.1:18617327-18619679[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0015 0.16 13.2 0.1 1 22 116 137 116 139 0.91

2 13 1.6e-06 0.00016 22.5 1.3 1 23 146 168 146 168 0.98

3 13 1.4e-06 0.00015 22.7 5.9 1 23 174 196 174 196 0.98

4 13 0.00015 0.016 16.3 6.1 2 23 213 234 213 234 0.98

5 13 2e-08 2e-06 28.5 3.2 1 23 239 261 239 261 0.98

6 13 4.5e-07 4.7e-05 24.2 0.8 1 23 266 288 266 288 0.98

7 13 1.6e-08 1.6e-06 28.8 2.5 1 23 294 316 294 316 0.98

8 13 2e-05 0.0021 19.1 8.1 1 23 372 394 372 394 0.97

9 13 0.00033 0.035 15.2 0.6 1 23 461 483 461 483 0.98

10 13 1.2e-05 0.0013 19.7 3.9 2 23 499 520 499 520 0.98

11 13 1.3e-06 0.00013 22.8 1.5 1 23 525 547 525 547 0.98

12 13 3.3e-05 0.0034 18.4 3.1 1 23 553 575 553 575 0.93

13 13 0.00022 0.023 15.8 5.8 1 23 581 603 581 603 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0015	0.16	13.2	0.1	1	22	116	137	116	139	0.91
2	13	1.6e-06	0.00016	22.5	1.3	1	23	146	168	146	168	0.98
3	13	1.4e-06	0.00015	22.7	5.9	1	23	174	196	174	196	0.98
4	13	0.00015	0.016	16.3	6.1	2	23	213	234	213	234	0.98
5	13	2e-08	2e-06	28.5	3.2	1	23	239	261	239	261	0.98
6	13	4.5e-07	4.7e-05	24.2	0.8	1	23	266	288	266	288	0.98
7	13	1.6e-08	1.6e-06	28.8	2.5	1	23	294	316	294	316	0.98
8	13	2e-05	0.0021	19.1	8.1	1	23	372	394	372	394	0.97
9	13	0.00033	0.035	15.2	0.6	1	23	461	483	461	483	0.98
10	13	1.2e-05	0.0013	19.7	3.9	2	23	499	520	499	520	0.98
11	13	1.3e-06	0.00013	22.8	1.5	1	23	525	547	525	547	0.98
12	13	3.3e-05	0.0034	18.4	3.1	1	23	553	575	553	575	0.93
13	13	0.00022	0.023	15.8	5.8	1	23	581	603	581	603	0.97

Sequence Information

Coding Sequence: ATGGATCGTGAGGACGCTATATTGTTCGACAGCGTAGACGGAATCAGACGTATCATAGAAGAGCCGTTAGACAAGGATGTCTCGACTCTGAGAGGATTCTTAGACTATGTCGAGACTATAACAACTCAAGAGATTAAAATCGAGATACAGGAATCAACAAAAACTAACAATGCCACTGTTTCCATTCCTGCAAGATTCGCTGATGTTAATCTAACAGATTTAATGAGAAAAGAATCGCTGGGAAAATCATCGATTCAATACAGTGCTCTGCCTGAGCAGCAGGATCTGTTCGCCGAGGGTAACACGGATGTTAATTGGAAGCTGAATGATGGAAATGAAAGTCTTTATCGCTGCGTTATTTGCCAAGTTCAATTTTCCAGTCGAGTATCTTTGGACAGACATATTGTGGATTTACATTTGGGTACAACGGGTCGATTTCAGTGCGATATTTGCCATAAAGAATTCTCTCGAGTCTCTGACTTGGCTCGACATAAACTAATACATTCAGGCGTTAAACCATTCCAATGCAACACTTGTCATAAGCAATTTTCTAGACAAGATCATCTGAAACAGCACATACTTATCCATTCTCAATGCTCTGATAGCGAACTATTTGCTTTTGAGAATGGTTTGAACAGGTGTACTATTTGCCATAAGCAATTATCACGGCCTCAACACTTAAGAACTCATATGCGACAACATTTAGGAACTTTGTTTGAGTGCGATAAATGCAACAAAAGATTTTCACGGGCTTCTCACCTCAAAGCACACATGCGTCTTCATTTGGGTACATGTTTTCGCTGTGATATTTGTCAGAAAGAATTTTCTAGACCCTCTGATTTGGACAGACATAAACTCACCCATTTAGACAAGAAATTATTCGAATGTCCTACTTgccaaaagaaattttctagaaAGGATAATCTCAAAAAGCACATGCTTTCTCATGTCGAATCTTTACCATCGAACCAAATTAATCATCGTCAGAATTTCTTTGAGGAAGATCTGTGTttgaattcaaagaaaaattgccAATGCAGTGTCTGCATTCCGAAGATTTCATTGCCTCTTGAATTCGAGGGACATACGATTATTCACTCTGATATAAGGTGCCATGAATGTCACGTTTGCAAGAAATATTTCACTAGGAAAGATCATTTGAAGAGACACCTCGCTTCGCACAAGATCTCACCTTGTGATCAGTCTATCGATCAATACATTACGAGTAGAAGAACTAAAGAACAAATGCTTTTAAACGGAGTTTCGAACTCGTTTGATCCGAGAGAAAAATCGGACGTATGCGGGGTTTGCAAATTGGAGTTTGGTAGTAggtttaattttgataaaagtaTGTGTTCGCATAATTGGACAGAGAAGAAATTCGAATGCGCGATTTGTGAGATgcgatttaataaaaaagttaGATTAAAAGAACATGTTCGCATGCATGGAAACAGTAATTTTGAGCTTAATGATGGGAATAAAGATCAAAACAGATGTAATATTTGTCACAAACAATTGTCACGCCCAGAACACTTGAAGGCACATATGCGACTGCATCTTGGAACACTTTTCAAGTGCGAAACTtgcaaaaaagaattttcaagattGTCAGACTTGGAGAGACACAAGTTGGTTCATTCGGGGCTTAAACAATTCATATGTATTATTTGTCATAAGCAATTTTCTCGTAAAGATTACCTAAAGAATCACATGCTTTCACACgctaatcaaaaatcatttgaatgcGACAAATGCAAGAAGCGCTTTACCTATTTCACCAATTTGAGAAATCACTTGCATCTTCATATAGGGGATTAA
Protein Sequence: MDREDAILFDSVDGIRRIIEEPLDKDVSTLRGFLDYVETITTQEIKIEIQESTKTNNATVSIPARFADVNLTDLMRKESLGKSSIQYSALPEQQDLFAEGNTDVNWKLNDGNESLYRCVICQVQFSSRVSLDRHIVDLHLGTTGRFQCDICHKEFSRVSDLARHKLIHSGVKPFQCNTCHKQFSRQDHLKQHILIHSQCSDSELFAFENGLNRCTICHKQLSRPQHLRTHMRQHLGTLFECDKCNKRFSRASHLKAHMRLHLGTCFRCDICQKEFSRPSDLDRHKLTHLDKKLFECPTCQKKFSRKDNLKKHMLSHVESLPSNQINHRQNFFEEDLCLNSKKNCQCSVCIPKISLPLEFEGHTIIHSDIRCHECHVCKKYFTRKDHLKRHLASHKISPCDQSIDQYITSRRTKEQMLLNGVSNSFDPREKSDVCGVCKLEFGSRFNFDKSMCSHNWTEKKFECAICEMRFNKKVRLKEHVRMHGNSNFELNDGNKDQNRCNICHKQLSRPEHLKAHMRLHLGTLFKCETCKKEFSRLSDLERHKLVHSGLKQFICIICHKQFSRKDYLKNHMLSHANQKSFECDKCKKRFTYFTNLRNHLHLHIGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00060529;
90% Identity: iTF_01412510;
80% Identity: iTF_00939782;