Mann007929.2
Basic Information
- Insect
- Macrophya annulata
- Gene Symbol
- -
- Assembly
- GCA_963924015.1
- Location
- OZ001258.1:21204152-21205951[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-09 3e-06 27.5 0.1 2 40 10 48 9 53 0.89 2 2 8.2 6.1e+03 -2.3 0.0 16 23 125 132 122 132 0.82
Sequence Information
- Coding Sequence
- ATGCCGCCTAAACGAGCATTGTggtcagaaaataatttagtaTCAGCTGTCAGGGCAGTGGAGAGAGGAATTTTGAGTTCATATGAAGCTGCAAAGAGGTATGGAGTTCCTAGAAGAACAATTCGAAACCACATTAAGAGtggcaatttgaaaaaaactctTGGTCGGAAAACTTTATTGAGTAATGATCAGGAAGCTGAGCTTGTAAAACGAATAACCAGGTTTGCTGAAATAGGTTTGCCTATAACACCTTTGATACTTCGGCGTTTAgtgtataaattttgtgaAGAGAACaacatcaaaaataattttaataataatacaagacTTGCTGGTAAAGATTGGTTTAAGGCATTCATGAAACGCAATCCTGAACTTTCACAAAGAAAAGCTCAATTTATGAACCCGGCCAGAgcacaaaaattgaataaattcattgttagtgatcattttgaaaaaattaagaagatCTACGATGAATTGGATCTAGCACATCATCCCGAACGAATTTATAATATGGATGAAAAAGGGTGCCGTTTAACAGTCCATCATCAACAGAAAGTTTTAGCTCAAAAAGGAGCTAAAAGAGTCCACTTACAATCGTCGGAGCATGCTGAAAGTGTGACCATCGCGGGATGTGTAAATGCCATAGGTACTGCCATACCGCCAATGGTTATATTTAAAGGCAAACGATTAAAGCCAGAACTATACGATAATTTACCGTGTGGGACGTTGGTAGAAAAATCTGCCAAAGGATATATGACCAACGAACTTTTTCAGAAGTTCTTAAAACATCTAGCCAAATACAAAAGTGCTTTAAAATGTCTGTTGATATTTGGTGGTGCAGCTTGTCATTTAGACTTGTCCATTGTTGATTTGGCTGATTCATtagacatatatttatactgtttACCATCAAACACTACTCATGAACTTCAGCCACTTGACAAAGCAGTTTACCGTTCATTTGAACATCACTGGGATAAGgaagttttattattcttagaaCAAAACCCTGATAAGAAACTGACTAAAGCTCGATTCAATATTATTCTTTCAAAAGTTTGGTCAAATTGTATGACTCACAGTAATATTACTAGTGGCTTCAAAGCTACTGGTTTACATCCTTTAGATCCTAACGCTATTCCGGAAGCTGCATTTGGCCCTTCTATGTTGACAGAAGCACCAGTGAGTCTTGCACTTGATAATGTTGAGAAAGATAACTCACAATCTATTAATTCATCAGCGCTTCTTGCACTTGATACTGATGATAAAGAAAACTCACAGCATGTTGGATCTCCAAACTCAATGACGACCAATAAGGGTCGAAAAGGAACTGAGCAGACTTCTATTGGACCGATTGAAAGTACTGTTATGGTTCATAGTCTGATTCCAAATGATCATGGACATAATTTGTCTACAACTCAGTTAAGAAGATCTTCATTTACTGAACTAATGCCCTCTCCAGTTAAATCTGCGggaaaaacaacgaaaattaGAAAGAAAGCTATTAATTACATAGGTACCCCAGTTACGAAAGATCTGTTTCATAAACCCGAagatggacaaaaaaaaaccaagaaaatcATAACCCCTAAACAGAAAGAAATTCCACCGGTGAAGAAATCAATTACCAAAAGAACCAGTGCTCGCTTGAAAAGACCAGGAAACTGGTATTGTTACGGCTGTGAAGAGGATGAAGTAGCTGATATGAGACAATGCATTAAATGCAACAAATGGTATCATGAAGCTTGCGTTGGTTTAACCGAAGATGATATCGACAATATTGAATGCTGCTAA
- Protein Sequence
- MPPKRALWSENNLVSAVRAVERGILSSYEAAKRYGVPRRTIRNHIKSGNLKKTLGRKTLLSNDQEAELVKRITRFAEIGLPITPLILRRLVYKFCEENNIKNNFNNNTRLAGKDWFKAFMKRNPELSQRKAQFMNPARAQKLNKFIVSDHFEKIKKIYDELDLAHHPERIYNMDEKGCRLTVHHQQKVLAQKGAKRVHLQSSEHAESVTIAGCVNAIGTAIPPMVIFKGKRLKPELYDNLPCGTLVEKSAKGYMTNELFQKFLKHLAKYKSALKCLLIFGGAACHLDLSIVDLADSLDIYLYCLPSNTTHELQPLDKAVYRSFEHHWDKEVLLFLEQNPDKKLTKARFNIILSKVWSNCMTHSNITSGFKATGLHPLDPNAIPEAAFGPSMLTEAPVSLALDNVEKDNSQSINSSALLALDTDDKENSQHVGSPNSMTTNKGRKGTEQTSIGPIESTVMVHSLIPNDHGHNLSTTQLRRSSFTELMPSPVKSAGKTTKIRKKAINYIGTPVTKDLFHKPEDGQKKTKKIITPKQKEIPPVKKSITKRTSARLKRPGNWYCYGCEEDEVADMRQCIKCNKWYHEACVGLTEDDIDNIECC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00939464;
- 90% Identity
- iTF_00939464;
- 80% Identity
- -