Malb016207.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- Zfy1
- Assembly
- GCA_949628255.1
- Location
- OX451208.1:34880402-34884093[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 1.8e+02 3.7 0.5 1 23 456 479 456 479 0.93 2 15 6.3 8e+02 1.7 0.5 2 12 514 524 513 533 0.87 3 15 9.3e-06 0.0012 20.1 1.7 1 23 540 562 540 562 0.98 4 15 3.3e-05 0.0041 18.3 2.8 1 23 570 593 570 593 0.98 5 15 0.027 3.4 9.2 0.2 1 14 605 618 605 628 0.79 6 15 0.00025 0.031 15.6 2.3 1 23 655 678 655 678 0.96 7 15 7.8e-05 0.0099 17.2 1.6 1 23 684 706 684 706 0.96 8 15 0.014 1.7 10.1 5.3 1 23 721 743 721 743 0.96 9 15 0.088 11 7.6 0.6 1 23 749 772 749 772 0.93 10 15 2.1e-06 0.00026 22.1 0.5 1 23 786 808 786 808 0.98 11 15 6.4e-06 0.00081 20.6 1.2 1 23 814 836 814 836 0.99 12 15 0.0045 0.56 11.6 0.2 1 23 842 864 842 864 0.98 13 15 0.00082 0.1 14.0 3.3 1 23 870 892 870 892 0.98 14 15 2.2e-07 2.7e-05 25.2 1.2 1 23 898 920 898 920 0.99 15 15 0.00081 0.1 14.0 2.4 1 23 926 949 926 949 0.96
Sequence Information
- Coding Sequence
- ATGTTGAAACTCATACTGCAGACCCAGGAGGGTCAGCAAATCGAAATAACCGTAAGCCCGGATGATACGTTTGAAGATTTACAGAGACAGTATGAAAGCCCTGAGAATCCGGGTCTGCCTGAACTCTTGAAGCATTTAATAACAAACGGTCTGGACGTGGATGGAAAGATGAAAGTATTCGATTACGTGACAAACAGCAGTACTACAGAATGGCTGGTGGAAGAACCACTAAATGATATTACAGGACTTGATACAGCCGATACACTGGAAACTATAATTAAAGAGATACCAATGAAAGAATGCTGCGTTGAGTATTGCCCTGTAACAGAAATTATGGCACCGAACAAAGTCTTCTTTCCTTTGCCTAGCGATAAAGATAGattatCATTATGGTTGAGAAAGATAAAAAGGCCTGATCTCTTCTACCCAGTACTTGCTGCAGGCCCAGTGGAACCCAAATACTTTGTTTGCGCAGATCATTTTGCACcacatcaatttttgaagGGAACTGATCAGGCGTTAAAAAGACGAGCTTGCCCATCTCTGTGGCCTTGTCGATCGGAAAAACACGTGATTAAAAAATCATCTGTGATTAATCATGGAACTGAgattattgttaaaaaatttcctgACGCCGTTGTGCAGACAAACGAAAATATCAATGTCTCTGATTTAATAGATCCTGAATACTCGATGGAATTGTTCGACCCAAAAGAGATTAATCATCCAGGTGTACTGTGTCGTTTATGTGGAGAGCAAGTTGTTAGCcctgtttatatattttcaaatgaagATAGTAACGCAGAATCCTCAGTtgctgataaaataaatttatgttTACCTATAACGGTGAACGCTAGAGACCCCTTGCCAAAACAAGTGTGTAAGGATTGTTTTGACAAGCTTGAATTGTGCTATAAACTTTCGGAAAAGTGTCTTGAGACTGAAGATAAACTGAAAGCAATGTTTGAACTGAAACAATTTCAAGTAAAAGATGTGGAGGAAAAACAATGCCCTTTATGCGTGTCTGGGAATATGCAAACAGTAACTAAGAGTGGAATTTATCGCAAAGATAAGGCTGGGAGTATTCAGGATAATTTAAAAAACTCTAGCGCTCGTACCAGACAAGTATCTCCTTCTAGGAGTTCACAAAGTAGAATAAGTTCTTTGAGTTCGGTGGATAAAAAGCCTCTTCAGGAAGCTAACGACGTTGATACAACAATTGTAGATGAAACATTTGAAGAAGCAGATATCCCGATGGGTTCACAGTTGCATTTACTGCCCAATGATTTGTCGTGCTCTATTTGTTATCGGAAAGAAAACAGCATAGAAAGTATGACCGAGCATGCAAAACAGCACAACGGCTACCCGTGCACAATTTGCAAAGATCTTAGCTTTAAAACTATGGGCGAACAGCAAGAACATTTTCTAAGACATAGGGTCGACAATGGGTGTTGTGAAATATGCTCCGTGGACTGgagcgaaatgaaaaatgttgcGGAGCACATTAAGCACTGTAAGCCAGAGTTTTGGGACGTTGAATGTGCTCAGTGTGGGGAAAAGTTTCCCCATGTTCAAGCGGGACGTGACCATAGGTGCCACGAGCCAGATGAATGgTTCGAATGCGATAagtgcaataaaaaatttgaggcGAAAAGTAGCTTGAACATGCACTTAAAAACACACGATAAGCCAGAAATCCTTTTCTACAAATGTTTATCATGCAACAAAGAATTTACCCGAAAAGGAAGTCTATACAAGCATATTACAACCTTCCACGAGGACGTAGAGACAAATTTAAGCCCTAGATGCTACAAATGCAAAAAGTGCGACGAGGCTTTTCCGACCTCAGCCATTGCCGAATCTCACATAACTGAGAAACACATTAGTCAATTAATAATGGCGGGCATGGAATTTATGAGCGATCAATTCACAGTTGAGGAAATAAATTTGACTCGCGTTTATATCTGCGAATATTGCGAACGCTGCTTTACAATCCCTAGTTCTTTACATGAACACAGGCAAATCGAACACGGCGATAATTCCGACTATCAATGTAACATTTGTAGCAAAACTTTTGGGTCCTATAAGTCGCTGTCGCGGCACAAGGCGTTACATGTTAAAGAATATGACCTGGAAGAACTGGGTATAAAGCTGTATTACGTTTGTCATTATTGTAACAAATCGTTTCTACATTTTGGGACATTGAGAACTCATACTGCTCAGCATCAACCACCGTTACCTTACTTATGCAGACTTTGCAATTTTAAGTTTGCCACTTATGAGGAGGTAACGGACCACAGAATGAACATACATCCTTATCAAACTGTCCTTCACGAAAGACCCACGAATTTCTATGACTGTAAATACTGCGAGAAAAGCTTCAATAATGAGATAGCTCTCGTGAAACACATTCGTATGCACACTGGCGAAAAACCCTACAAATGTTCCGTTTGTGAGAAAGGGTTCTCACAAACCTCCGGCCTCTATACTCACCTTAAAACTCATTCCGATTTGAGGCCGTACACCTGTCCTGTATGCCCTCAAGCTTTTAAAATCAAAGGAGACAGAGACAATCACGTGAAAAAACATTCCGGTGAACGACCCTACAAGTGTGATATATGCAACAAGGCTTTTATGACGCAGCATGTCTTTAGCCAACACAAGAAAATTCACACAAATGAACGGCCATATAAGTGTGATATTTGCGGAGAAGCTTTTAGAAGATCACACGTACTGACTGTACATATGAGACGTCACACTGGCGAGAAACCACACATATGTGATATGTGCTTTAAGGCTTATAGACAACGGGGGGATTTgttgaaacataaaaaaatgcaGCATGGTATTGTCCCAAATAACTCAAACGGAGCTGCTAGTAATTCCAGTACGGATCCCACGCCTTCTGGGGATATTTCAAGCACCGAGTCTACCACAGCTTTTTTTACCCCTTTGACAAGTTAA
- Protein Sequence
- MLKLILQTQEGQQIEITVSPDDTFEDLQRQYESPENPGLPELLKHLITNGLDVDGKMKVFDYVTNSSTTEWLVEEPLNDITGLDTADTLETIIKEIPMKECCVEYCPVTEIMAPNKVFFPLPSDKDRLSLWLRKIKRPDLFYPVLAAGPVEPKYFVCADHFAPHQFLKGTDQALKRRACPSLWPCRSEKHVIKKSSVINHGTEIIVKKFPDAVVQTNENINVSDLIDPEYSMELFDPKEINHPGVLCRLCGEQVVSPVYIFSNEDSNAESSVADKINLCLPITVNARDPLPKQVCKDCFDKLELCYKLSEKCLETEDKLKAMFELKQFQVKDVEEKQCPLCVSGNMQTVTKSGIYRKDKAGSIQDNLKNSSARTRQVSPSRSSQSRISSLSSVDKKPLQEANDVDTTIVDETFEEADIPMGSQLHLLPNDLSCSICYRKENSIESMTEHAKQHNGYPCTICKDLSFKTMGEQQEHFLRHRVDNGCCEICSVDWSEMKNVAEHIKHCKPEFWDVECAQCGEKFPHVQAGRDHRCHEPDEWFECDKCNKKFEAKSSLNMHLKTHDKPEILFYKCLSCNKEFTRKGSLYKHITTFHEDVETNLSPRCYKCKKCDEAFPTSAIAESHITEKHISQLIMAGMEFMSDQFTVEEINLTRVYICEYCERCFTIPSSLHEHRQIEHGDNSDYQCNICSKTFGSYKSLSRHKALHVKEYDLEELGIKLYYVCHYCNKSFLHFGTLRTHTAQHQPPLPYLCRLCNFKFATYEEVTDHRMNIHPYQTVLHERPTNFYDCKYCEKSFNNEIALVKHIRMHTGEKPYKCSVCEKGFSQTSGLYTHLKTHSDLRPYTCPVCPQAFKIKGDRDNHVKKHSGERPYKCDICNKAFMTQHVFSQHKKIHTNERPYKCDICGEAFRRSHVLTVHMRRHTGEKPHICDMCFKAYRQRGDLLKHKKMQHGIVPNNSNGAASNSSTDPTPSGDISSTESTTAFFTPLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00939820;
- 90% Identity
- iTF_00939820;
- 80% Identity
- -