Basic Information

Insect: Macrophya alboannulata
Gene Symbol: -
Assembly: GCA_949628255.1
Location: OX451209.1:21973860-21976038[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00027 0.035 15.4 0.2 2 23 126 147 125 147 0.96

2 11 0.0099 1.2 10.6 5.7 2 23 216 237 215 237 0.94

3 11 2.7e-05 0.0034 18.6 2.4 1 23 354 376 354 376 0.97

4 11 5.3e-07 6.7e-05 24.0 0.7 1 23 382 404 382 404 0.98

5 11 3.3e-05 0.0041 18.3 1.6 1 23 410 432 410 432 0.97

6 11 0.00019 0.023 16.0 1.3 1 23 448 470 448 470 0.97

7 11 4.8e-08 6.1e-06 27.3 1.0 2 23 477 498 476 498 0.97

8 11 4.1e-06 0.00052 21.2 3.5 1 23 504 526 504 526 0.98

9 11 1.1e-06 0.00014 23.0 7.2 1 23 532 554 532 554 0.98

10 11 7.3e-05 0.0092 17.3 4.6 1 23 560 582 560 582 0.95

11 11 2.4e-06 0.00031 21.9 2.4 1 23 588 610 588 610 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00027	0.035	15.4	0.2	2	23	126	147	125	147	0.96
2	11	0.0099	1.2	10.6	5.7	2	23	216	237	215	237	0.94
3	11	2.7e-05	0.0034	18.6	2.4	1	23	354	376	354	376	0.97
4	11	5.3e-07	6.7e-05	24.0	0.7	1	23	382	404	382	404	0.98
5	11	3.3e-05	0.0041	18.3	1.6	1	23	410	432	410	432	0.97
6	11	0.00019	0.023	16.0	1.3	1	23	448	470	448	470	0.97
7	11	4.8e-08	6.1e-06	27.3	1.0	2	23	477	498	476	498	0.97
8	11	4.1e-06	0.00052	21.2	3.5	1	23	504	526	504	526	0.98
9	11	1.1e-06	0.00014	23.0	7.2	1	23	532	554	532	554	0.98
10	11	7.3e-05	0.0092	17.3	4.6	1	23	560	582	560	582	0.95
11	11	2.4e-06	0.00031	21.9	2.4	1	23	588	610	588	610	0.99

Sequence Information

Coding Sequence: ATGTTTATAGTCACTAAAGAAATAGATAGTGAAAATATAAGCAAACTATGTCGTACATGTCTGAGAGAAGACGGTGAGAAAATGGTATGTTTATTCGTCGGTCCAGCCGGCTCATCGCTAGCTGCAAAACTACGCTCTCTATCCTGCTTGGAGGTTTGGCAAGGCGATGGACTGCCCGAAAAAATGTGCGATCGATGCGTCACAAGGGCCGAATCCGCGCTACTTTATAGAGAACAATGTCGAGCCGCGGATCGAGCTCTCAGACAAGCTGCTGTCAAGGTTTCGGGATTAACATCTTACACAACGGTATCCGGCTGCAAGTTGTATCAACAAAATCAGGGTTTTGTTCCGATTCATAATTCTCAGAAGACGTTAAAATGCGTCGAATGTGGTGcagtttttgttaattatgaAGAATTATGTGCACACAGTAGACTGCATGTTCCATCGGTTCAAAATACCACACCTGTACAACACATGCACATTGTTGAGccgagaaataattattttaatataaataatctaaGCAATAATTTAGTTAACGATGGGGTACACGGGGTGGAAATGTCTGCTTTGATGAGATCTAATATGATGCACGAGGTACAAGTTGATACCGAAGAACCGAGCAGAGCGGCTTGTGCTTTACACTGCTCTTTGTGTAATCACACGTTTACAAATAGAAATCAATTGATAAATCACAATTTTACACACAGTACAGATCACATGGATTTATCATCGGTTGATGAACACAATAATGTTGAAGTTAGCGAAGACTCTAATCAAATAGCACAGAATTTAAGTTACGATAGAAACGGGGATCAAACAACTGATAATTCTATACAGAATTTATCTTTTACTAGGGAAATAGTACCGGTtagaagaaaattagaaaatattaatttcccTCCCAATGAAAACCTAGAAAATGTTCAAGATAACAGAACTTTTCAATGCCTTGAAACTGAGGGTATTCCACTTGCGGAAAACTTGGTCTTTCCCAAAGTTTCTAGAGCCGTTAAGCTGGGCTCAAACGATAATTcttcaataaaatacaaaaagcaTAGATGCGTTGTATGTCCTAAGTCATTTGCTCAAAAGTCTAAGCTACTCACTCATCAGTTTTCTCACACCGGGCAGAGACCTTACAAATGTTCAATATGCGAAAAGGCTTACACTTCTAAGAGTAAATTAAACGCCCATGTTAGACTGCATACTAAAACAAATGTCCACGTTTGTACGATATGCAGTAAGACTTTTGCCTTTGCTTCGTATCTTGAGGATCATTCAAAGACTCATAAATTTGGTAGAGAGAAATTGGTAGGCTCTTTGAAAGCCGGTACTTTTGATTGCGCAGTTTGTGagaaaaagtttcgttttgTTAAAAACTTTAAAGCACATTTACGACTTCATACCGGTGAGAATTTAGTCCAATGCGAATATTGCGATAAACGTTTCAGCCAGAAATATAACTTGAAGGTTCATCTAGAAACGCACAAAGACTTGAAGGCTCACAAGTGTGACTTTTGTGATAAAAGCTTCAATCAACACGGCAACTTGGTAGAGCATTTAAGaattcacaaaaaattaaaaccatACAAATGCGATATGTGCGGTAAATGTTTTTCACAATCTagtcatttgaaaaatcataaaacATCACACAACTCAGATAGAGATCATTCCTGTAGATTATgtggtaaaaaatttaaactaGCCAGTCATTTGAAGAGGCATTTGGACCTTCACAGTGGCAGGAAATCGTACAAGTGTTTAGAGTGCAATCAAATGTTTTCACAAGCGTTTAGTTTGAAAAGACACTTGAAAAGACATGCAGATATTCAAACATGA
Protein Sequence: MFIVTKEIDSENISKLCRTCLREDGEKMVCLFVGPAGSSLAAKLRSLSCLEVWQGDGLPEKMCDRCVTRAESALLYREQCRAADRALRQAAVKVSGLTSYTTVSGCKLYQQNQGFVPIHNSQKTLKCVECGAVFVNYEELCAHSRLHVPSVQNTTPVQHMHIVEPRNNYFNINNLSNNLVNDGVHGVEMSALMRSNMMHEVQVDTEEPSRAACALHCSLCNHTFTNRNQLINHNFTHSTDHMDLSSVDEHNNVEVSEDSNQIAQNLSYDRNGDQTTDNSIQNLSFTREIVPVRRKLENINFPPNENLENVQDNRTFQCLETEGIPLAENLVFPKVSRAVKLGSNDNSSIKYKKHRCVVCPKSFAQKSKLLTHQFSHTGQRPYKCSICEKAYTSKSKLNAHVRLHTKTNVHVCTICSKTFAFASYLEDHSKTHKFGREKLVGSLKAGTFDCAVCEKKFRFVKNFKAHLRLHTGENLVQCEYCDKRFSQKYNLKVHLETHKDLKAHKCDFCDKSFNQHGNLVEHLRIHKKLKPYKCDMCGKCFSQSSHLKNHKTSHNSDRDHSCRLCGKKFKLASHLKRHLDLHSGRKSYKCLECNQMFSQAFSLKRHLKRHADIQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01414394;
90% Identity: iTF_01414394;
80% Identity: -