Malb020937.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- clz9
- Assembly
- GCA_949628255.1
- Location
- OX451210.1:7262879-7265047[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-08 4.1e-05 24.1 0.1 1 38 15 52 15 60 0.87 2 2 4.1 3.7e+03 -1.4 0.0 21 30 361 370 361 372 0.80
Sequence Information
- Coding Sequence
- atgGTCCgcacatataaaaaaaaaaccgacagAAGTTCTATCGATGAAACTGCAATGGCATCTGCAGTTGCTGATGTGCTGGATGGCTCACTGTCAATTAGAAAAGCAGCTCATAAGAACAACATAAAGATAGCTACGTTACAACATCGagtagaaaagaagaagagaaaaacagaaaattcgGACAGTACTGACGTCAGGTACGCGTCCAAGTATACATCGCATCAAGTATTCACTATAGCACAAGAAAAGCTATTAAATGACTACGTAATGAAATGCAGTAAAATGCACCATGGCCTTACTTTGACACAAGTGCGCCAACTTGCTTATGAATATGCAAAAAAAGCGAATTGCCGCTATCCACCTGCGTGGGATGATAACAGGGCTGCTGGTATTGATTGGATTATTGGGTTTCGTAGCAGAAACCCTAACATCAGCTTGAGGAAGCCTGAAAATACAAGCGTTGCCAGATCATTCTCTTTTAATAGGGGCGCTGTAACAACGTTTTTTGACAATTTAGAGAAAGTCTTTTTAAGACATAGTTTTTCAAGTGATCGCATAATTAACTGTGATGAAACTGGTGTCACAGCGGTCCTTAATGCTCCAAAGGTCTTGGCAGAAAAGACACAAAGACAGGTCGGCCAAATGGTATCTGCTGAGAGGGGTGAATTAGTCACTTTTGGAGGTATCATAACAGGTGTTGGAAATACAATTCCACCTGTTTATGTGTTTGCCAGGGTTCACTACAAAAGTCATTTTTTAAATGGTGCTCCAGAGGGATCTTTGGGATTGTCATCCAGATCAGGTTGGATAAATACTGAACTATTTTTGGAAGTCCTCAAGCATATTCAAAAGCACACAAACAGCACAAAAGAAAGGCCTATTCTGTTGATTTGCGATAATCACGAGTCCCACATTTCAATTGAGGCAATCAATTACTCCCGTGAGAATGGaatcatttatttgtcattcCCTCCACATACATCCCACAAAGTCCAGCCTCTTGATGTTGGTGTTTTTGGCCCCTTTAAGACAAAGCTAAAAGTAGCTTATAACGACTGGCACATTAATCATCCCGGGAAGGCTTTAAGTATTTATGATATACCAAGTCTTACAAAAATAGCCTATTTCGAATCATTTAATGCCAAAAACATCACAAGTGCATTTACTAAGCCCGGCATTGTACCATTCAATAGATTGGCATTCTCCGATGACGACTTTGCACCCTGTGAGATCTATGCCAACCAAGAAGCATCAAATGATACTGAAAGCACACAGCCTGCAAACTCTGACGAGTCAAGGGCAACTGCAGATCCTATTATAAATATGGAAATAGACCAAATCATACCTGAACGAAGTGTAACGCCCCCGCTCGAACAAGACCAAAGAAATATTGAACCTGTGGCCTCCACATCTAGAGTCTCAGAGACATTAACAGAAGCAACTACTTCTGAAACAATTACCCCAGAAGCTGTAAGGCCTTATCCAACCATTGCTCGCACAAGCAAGACTAgaaggggaaaagaaaaaggtaagTCTAGGATTTACACTGATACGCCAGAAAAACGAAGACTAGAGGAATTGAAGAATGCTAAAGCTGAGAAAATCGCTAAACAAGAACAAAGAAAACGCATAAAAGAGTTGAAGACTGCTCGAAATTTATTAGGCATTACGAAACCGAAACAGAAGCAGAATAAGAAAGCATCTAAAGCTATATTAGAATCTGACACTTCTAACTCCAACAGTGATATTCAGCTACAGGAATCATTCGATTCGTTAGATGAAGAATCTATCTCAGAATGTTCTGATAATGAGCAAATGAATGCAATAAAACCTAAGATAAACGACCTGAAAGAAGGAGATTTCGTAATAATCAATTTAAACAAGGTAGGTAAGAAGAAGAGTGTTGTTAAGCAAtatgttggaaaaattctgtttagatgtgacaaaaaaaacagCGATTTTCAAGTCTCCTTTTTAAAACGAAAACCATCGTTTGTATCAGGAATTGCATCTTTTGTGTTCCCCGATAAAAAGGATGAGGCTTCTGTGCATATATCAGATATCGTCCTGAAATTGCCAAGCCCATTTGCAAAGAAAGGAACCGCTAGAACAGCTTCTTCACttaattttaaaattgatttgtctgcatataatattcttatttAA
- Protein Sequence
- MVRTYKKKTDRSSIDETAMASAVADVLDGSLSIRKAAHKNNIKIATLQHRVEKKKRKTENSDSTDVRYASKYTSHQVFTIAQEKLLNDYVMKCSKMHHGLTLTQVRQLAYEYAKKANCRYPPAWDDNRAAGIDWIIGFRSRNPNISLRKPENTSVARSFSFNRGAVTTFFDNLEKVFLRHSFSSDRIINCDETGVTAVLNAPKVLAEKTQRQVGQMVSAERGELVTFGGIITGVGNTIPPVYVFARVHYKSHFLNGAPEGSLGLSSRSGWINTELFLEVLKHIQKHTNSTKERPILLICDNHESHISIEAINYSRENGIIYLSFPPHTSHKVQPLDVGVFGPFKTKLKVAYNDWHINHPGKALSIYDIPSLTKIAYFESFNAKNITSAFTKPGIVPFNRLAFSDDDFAPCEIYANQEASNDTESTQPANSDESRATADPIINMEIDQIIPERSVTPPLEQDQRNIEPVASTSRVSETLTEATTSETITPEAVRPYPTIARTSKTRRGKEKGKSRIYTDTPEKRRLEELKNAKAEKIAKQEQRKRIKELKTARNLLGITKPKQKQNKKASKAILESDTSNSNSDIQLQESFDSLDEESISECSDNEQMNAIKPKINDLKEGDFVIINLNKVGKKKSVVKQYVGKILFRCDKKNSDFQVSFLKRKPSFVSGIASFVFPDKKDEASVHISDIVLKLPSPFAKKGTARTASSLNFKIDLSAYNILI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -