Malb020737.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- -
- Assembly
- GCA_949628255.1
- Location
- OX451210.1:6411913-6412458[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-10 1.4e-07 32.0 0.0 3 42 22 62 20 64 0.92 2 2 0.96 8.5e+02 0.7 0.0 13 22 113 122 111 124 0.90
Sequence Information
- Coding Sequence
- ATGCCCAGGaaatatattagaaaaaatactCCAGTCTCCTCTAAGCGGGGACAGTGgtctattgaaaatttaagagAGGCTATACAAAGAATCAATGCTAAGGAGATAGGTGTTAACGAAGCCTCAAGATATTATGGAATACCTGTACGGACTCTACGTCGTCGGAGAAGTTCGGGCAATGTCGAAAAGCTAGCCCTCGGACCACAAGGTTTATTTGGCAGCAACAATGAGAAACGACTCGTTAAACGAAAGTTTGCCGAAAAACTTGGGCTTAAGCATAAAttcaataaagaaacaaaGTGCGCAGGGCGCGACTGGCTCATTTCGTTTCTGGAACGAAATAAAGAACTCAGTATTAGACAAGCCGAGGGATTATCTTTGGCACGTGGTCAGGGAATGTCGAGGGATGAAGTAAAGCGGTTTTTCGACTTGCTGTCGGAAGTTTATATCAAGTATGATTTCTTCCATAAACCAGGGAACATCTATAATATGGATGAATCTGGTTTGCAGCTAAATAACAAACCTAGGAAAGTAGTCGCAACCTGA
- Protein Sequence
- MPRKYIRKNTPVSSKRGQWSIENLREAIQRINAKEIGVNEASRYYGIPVRTLRRRRSSGNVEKLALGPQGLFGSNNEKRLVKRKFAEKLGLKHKFNKETKCAGRDWLISFLERNKELSIRQAEGLSLARGQGMSRDEVKRFFDLLSEVYIKYDFFHKPGNIYNMDESGLQLNNKPRKVVAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -