Malb003160.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- -
- Assembly
- GCA_949628255.1
- Location
- OX451206.1:28197479-28198584[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-11 2.2e-08 34.6 0.0 5 38 1 34 1 36 0.94 2 2 4.3 3.8e+03 -1.4 0.1 16 23 128 135 126 136 0.84
Sequence Information
- Coding Sequence
- ATGATAGAAGCCATCACGCAAGTAATGAGTGAAACAATGTCCACTAGAGAAGCCAGCGAACGATATGAAGTTCCACGGAGTACGCTATTGGATAGATTAAGAATCCTACGTGCaggaaatgaaacaaaattggGACCGCGGATAGGTTTTTATAAGAGAACTTCTACTGAGGTACAGGAAACAGAGCTCCGTGACCATATTAAATCGCTTGACGCACAGCTAATGCCtctgaatgaaattgaattccTAAAGCTCGCATATCAATATGCTGAACAACTGAAAGTCCCTCATAGGTTTAATAGGACTAAGAAAATGGCGGAAACAGATTTTGACTACGAGTTTACGAAAAGGCATCGAGATTTGAGTTTGAGAACTGCTGAGTCCATAAGTCTGCGAAGAGCCGCAGGCTTTAATAAACAGCaagttgatttattttatgataAGCTTACTGAATCgatggaaaaatattcattcagtCCAACGCGAATTTTTAACGCCGATGAAACAGCTACACAAGCTCCGAAGCCCTCCACCTCGAAACAGAGTTTGCCTCAACCACTTTCTACAACAACAGAGGAAATACCTCAACCTGCAACATCTTATCAGGTATTCTCAACTGTCCCTTTCAAAGTATTGCCTACGACATCTCAATTGATGAACGATTTGCAGACACCTCAAACTGTACTAAAGGAACTCCGTCTACTTCCGCACGATGCGAAGGAAAGAATAAACTTAAGAAAACGGAAAGGAGAACAGAGTGAAGTTCTAACTTCTGCATCATACAGAATTTTTACGGaggaaaaacgaagaaagatCGAGGAGAAGACTTGTAAACAGCAGACTAAACAGAAGATTAAACAGGAGGCTGATGtagtaaataagaaaaatggaCCGAAGTGGAATCAAAAACaacaacgaaaaataaaaaacggatAA
- Protein Sequence
- MIEAITQVMSETMSTREASERYEVPRSTLLDRLRILRAGNETKLGPRIGFYKRTSTEVQETELRDHIKSLDAQLMPLNEIEFLKLAYQYAEQLKVPHRFNRTKKMAETDFDYEFTKRHRDLSLRTAESISLRRAAGFNKQQVDLFYDKLTESMEKYSFSPTRIFNADETATQAPKPSTSKQSLPQPLSTTTEEIPQPATSYQVFSTVPFKVLPTTSQLMNDLQTPQTVLKELRLLPHDAKERINLRKRKGEQSEVLTSASYRIFTEEKRRKIEEKTCKQQTKQKIKQEADVVNKKNGPKWNQKQQRKIKNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -