Basic Information

Gene Symbol
ct
Assembly
GCA_949628255.1
Location
OX451206.1:13328253-13332389[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-32 1e-28 100.0 0.0 2 77 364 440 363 442 0.96
2 2 1e-30 5.6e-27 94.4 0.0 3 75 586 659 584 663 0.95

Sequence Information

Coding Sequence
atgccAACTATTCTCCCAAACACGAAACAAACACCCTTGCGTAATAGATGTATATCGACGTataaacaacgaaaaaaatcagaacaCATCGCAAGTCGTGTCTTACCCGTAGAGTGTGTTGCAGGCAAGGAGCAGGGGATGCCGACATTTGCCCGAGGACCACAAGACGGTGGTCCTCAGGATATGAGCGACGAACGTTTGGCCCATATGCTGTCAGAGTCCGGACATCTGCAGATGCGTGGCGAGCACGACACCTCGAATGATGCCGATAGCAAAAGTCCGCATCGAGTCGGTTGCCCTAGCCCCTTCAGCAAGGAAAGAATGGACAGTCTGAACAGGAGAGTTAAGAAGTACGAAAACGACGACATTCCTCAAGAGAAAGTTGTGAGGATCTACCAAGAGGAACTCGCCAAGCTGATGGGTCGCAGAGTCGATGATCTTCGCGGACCCAGAGACTTCCCACCGAGCGCGATGTTTCCTCCCTTTTTCAGCGGCGCCCAGGGTATGCAAGGGATGGATCGTACGCAGGAGGACATCCGTCTAGCCCTCGACGCGTATCACCGTGAATTACAAAAGTTAAACTCTGGTCCGGGTCAAAATCCCGCCTTAGCTGGACTCCCTGGTCTTCCAGGACTTCCGGGACTTCTAGCCCTACAGCAACAAGCTCTTCAGCAACATCACCTCGCCACTAACGGTGGCGGAGTGCAAGACCTCAGCCTCGTAAAAGTAGACCCAAGGAATAAAATGATGAACGGTGTTTCGgaggaagaaaaggaaaaaatggaagaagCGATGAGACACGCAGGAAGTGCTTTCTCCTTGGTACGACCTAAGCAGGAACAGCCCATCGGGCCACAGTCTACCCCCGGCGGTTCAAGCGCAAGTTCGCCTCTTGGGAACTCGATTTTACCGCCAGCTATGACCCCGAATGAAGACTTTCCTGGTGCCGCGGCAGCCAGTCCTCTGCAAAGAATGGCGTCGATCACTAATAGCTTAATAAGCCAACCGTCCACTCCCACTCACCATTCGCCGAATCAGAGACCATTGAAAGCGGTTTTGCCTCCGATAACACAGCAGCAGTTCGACATGTACAACAATTTGAATACCGAAGATATCGTCAAAAGGGTGAAGGAGCAGCTCTCGCAGTACTCGATTTCTCAGCGTCTATTCGGAGAGTCTGTCTTAGGACTGTCCCAAGGCTCGGTATCGGACCTCTTGGCCAGACCGAAGCCTTGGCATATGCTGACGCAAAAAGGACGCGAGCCATTCATCAGAATGAAAATGTTCCTTGAGGATGATAACGCGGTTCATAAACTTGTCGCCAGTCAGTACAAGATCGCGCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCcCTGCGGAACCCCAATGAAACCGATGCCACCAACGAAACTAGTTCAAGAGCAACTCCAAAATGCTGCAAAGGCCCAGGCTGCTGCACAAGCCGCGGCTCAAGCGGCGGCACAACACCAACAGGAGGCTCAAATGCAGCTTGGACCACCTCAACCGAGTCCACAGCATCCGCAACATCCGCAACCACCACCACCGATGATTTTGACTCCTACCGGCCCTCATCATCCTCACGCTCAACTCAGCATGCAAGAACTTCAGAAGAAGCAACAGCAAATGAGCCTTCACTCGCCTCATCATCAAATGGCTCCTTCCCCGCTCCGTGGACTTCACCCTCACATTTCACCGAGTGTTTACGAGATGGCCGCGCTAACTCAGGACCTTGATACCCAAACGATAACGACGAAAATCAAGGAGGCTTTGTTGGCGAACAATATTGGACAGAAAATATTCGGCGAAGCAGTACTTGGTCTGTCTCAGGGTTCGGTTAGCGAATTATTGAGCAAACCGAAGCCGTGGCACATGCTCAGTATCAAGGGACGCGAACCGTTCATAAGAATGCAGTTGTGGCTTTCGGACGCACATAATGTCGACCGACTTCAAGCGTTGAAGAACGAACGACGAGAGGCGAATAAAAGACGAAGAAACAGCGGACCCGGTCATGACAACAGTTCCGACACATCGAGCAACGACACTGCCGAGTTTTATCACGCCGCATCTCCGGGCCCCGGTCCTGCATCGGCGAAAAAACAACGTGTTTTATTCTCCGAGGAGCAGAAGGAGGCTCTCAGACTCGCCTTCACCCTTGACCCATACCCGAATGTGGCTACGATAGAGTTCCTAGCCGGTGAACTCGCCCTCTCTTCACGGACGATAACGAACTGGTTCCATAACCACAGGATGCGGCTTAAGCAGCAGTCACCACACGGTCCACAGGAAGCACAGTCACCCAGGGAACCTGGCCAGCCTTTTGACCCTGTGCAATTCAGACTACTTCTCAACCAAAGACTACTTGAAATACAGAAGGAAAGGCTGGGACTTGGCAATGTCCCGATTCCTTACCCGCCCTACTTCAACACGAATCTTGTTGCCCTCGTCGGTAGTGCCCTCAAGGAGCAATGCTCGGGTCTCGATCTTTCCATGGGCGCCTTGAAGAGGGAACCAAACCAGGAGTTTGAGGACGACGACGGCGACGACGCGATGAGTAATCTCGGTAGCGAGGACTCGGACGGTTCGGGTGGTAGCATAAAACGTGAACCCACGGAGACTCCAGCCCCGGCAACGGTCCGATCAAACAGAAGAAAACCGGCAGCACCACAATGGGTGAACCCGGAATGGCAAGAGCCAGCCAGGGCTGGTGACGAGGTGATAATAAACGGCGTATGCGTTATGCAAACTGACGATTACGGGGTTAAAAGAGAAGCGGAAGAAACTGTACGCGTCGAACCTACCCCTGTTCAAGACAGATACGAAGAGGACGCGGCGAGTGATTCTTCCTCAGCATCCGGTACCGGGCAAGGATTACAGGACCGAGATAGTCCCATGCCTAGTCCAAAGTCTGGTCAACAAAGTCCGATAACTTCGCCAAGACCACCATCGGAACAGATCAGTATGCAGCAGCAGTCTGTTCAGGATGATAATATGAAGGATGTTGTTAAACACGAGCCTGAAGAATCATGGGATTATTAG
Protein Sequence
MPTILPNTKQTPLRNRCISTYKQRKKSEHIASRVLPVECVAGKEQGMPTFARGPQDGGPQDMSDERLAHMLSESGHLQMRGEHDTSNDADSKSPHRVGCPSPFSKERMDSLNRRVKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPSAMFPPFFSGAQGMQGMDRTQEDIRLALDAYHRELQKLNSGPGQNPALAGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLVKVDPRNKMMNGVSEEEKEKMEEAMRHAGSAFSLVRPKQEQPIGPQSTPGGSSASSPLGNSILPPAMTPNEDFPGAAAASPLQRMASITNSLISQPSTPTHHSPNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPPCGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQEAQMQLGPPQPSPQHPQHPQPPPPMILTPTGPHHPHAQLSMQELQKKQQQMSLHSPHHQMAPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRNSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQSPHGPQEAQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYPPYFNTNLVALVGSALKEQCSGLDLSMGALKREPNQEFEDDDGDDAMSNLGSEDSDGSGGSIKREPTETPAPATVRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAASDSSSASGTGQGLQDRDSPMPSPKSGQQSPITSPRPPSEQISMQQQSVQDDNMKDVVKHEPEESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00938568;
90% Identity
iTF_00158998;
80% Identity
iTF_00938568;