Malb025659.1
Basic Information
- Insect
- Macrophya alboannulata
- Gene Symbol
- retn
- Assembly
- GCA_949628255.1
- Location
- OX451211.1:19411834-19422778[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.3e-19 9.6e-16 58.8 0.0 17 89 136 206 122 206 0.92
Sequence Information
- Coding Sequence
- ATGGATGAGCGGGGAGGCAgtaagcagcagcagcatgcAGCAGCACCGGCTCGGCGTGGTAGCTCAGCTAGTGTGTCTCGAGTCTCCGGTCTCCGGGGACATTCGGCCGGGATTCACTGCTCGTCACGCGAGATTCTGGGAAAAGTTGTTTCGCTCTTCGCTCTTTCGATCTTCGGTCTTTGCTCTTCGGTCTTCGGTCTTCGGGCTCCGGTCTTCGGTCTTCGGAGAGCTAGCGTGGCGGTGGTGCAGGAAGAACCTGGTCTGTGGTTCGGTTCGAAAGGGCGAGGGGAAGGCCTTCGGCGCTCGCCTCTCGCTCGGCACACGGGCGATGCCGATGCTCCGGACGGCTCACACAACACCCAACACCGGACACACAACACACAACGCCGTGTTCCGATATATGCGAGAACACCGATCAACCGATTACCAATCATGGCAAAGTCTGTTCTCGATCTGTACGAATTGTACAACCTTGTTATTGCCAGGGGTGGACTAGTCGAcgtaataaacaaaaaactatGGCAGGAAATCATCAAAGGACTTCATCTTCCGTCCAGCATCACATCGGCAGCGTTCACGTTGCGCACACAATACATGAAATACCTCTACCCGTACGAGTGTGAAAAAAGGCGGCTGTCAACCCCGGCTGAACTACAAGCTGCGATCGACGGTAACAGAAGAGAAGGACGAAGGAGTAGCTACGGGGCGTACGCGGGCGGTGGACCCGGTGAATCAATGGTGCGTGGAAGTCCCCATGCTCCCAGCTCGTTGTCGCTTCACGCCCAAATGTCACCCCTGTCCTTGGTCACCGCAGTGGCGGCCGGAGGACAACACCACGGTCCACAGTCAATGGTGAACGGAAGTGCCGCTCACACTCCGCTACCACATCATCCCCATCATCCGCAACATCCGCAAGGACCTCTAGGTCAACCACTGAACACTGGACCAATTCCAGGACTGGCGCCCTCAGAATTCGAGGCCCGTATGGTAGAGTACGTGAAACTCCTGAACAAGGAATTGCGTAGCGCCGGTGCTGGGACTCCACCTCCGATGATTCACCGGCAAGGTAGTGCCTCGCCACCCTCGTCCACATCGCCGCGTGACGCTGCCCTAAACGCCCTTGAAATGTCACGACTAACCTTGTGGAATATGTACAACAACAACACCCTTTATCCAGGCGTTGGTCATCAGCCACCACTGTCGCCGCAAGCTCCACATTCTCCTCTACCGCCAGCCGCGAGTCCTGAACCACAAAGAGAAGCCCTCGACTTGGGTCTGAGATCTTCGCCAATGTCGTCACCCCCCGCGAGAAACAGTCCGCCAACATCCGGAGGCAGTGTCCAAGTTAAAAGAGAACAGGATCTTGGAGGGATAACGATAGGTCCGCCGCCAGCGAAGAGATTACTTTCAGAGGATGATTGCACCCCCGAAAAGACAGTACCGGGATTGGCTGGGGCTCATATCAAAATATCCAACAGAGGAGATGGTCGTAACGGTGAGAATTCACTGGTGGTCAGTATGGAGTTGAACGGTGTCATGTACCAGGGTGTACTTTTTGCGCAAAATGACAGCACCAGTAGCACCGGCACGACACACGGAGCCACGACAAATAACAATACAAAAACATCACGCGGCGTTGTCTCGTGA
- Protein Sequence
- MDERGGSKQQQHAAAPARRGSSASVSRVSGLRGHSAGIHCSSREILGKVVSLFALSIFGLCSSVFGLRAPVFGLRRASVAVVQEEPGLWFGSKGRGEGLRRSPLARHTGDADAPDGSHNTQHRTHNTQRRVPIYARTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAGGGPGESMVRGSPHAPSSLSLHAQMSPLSLVTAVAAGGQHHGPQSMVNGSAAHTPLPHHPHHPQHPQGPLGQPLNTGPIPGLAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPPSSTSPRDAALNALEMSRLTLWNMYNNNTLYPGVGHQPPLSPQAPHSPLPPAASPEPQREALDLGLRSSPMSSPPARNSPPTSGGSVQVKREQDLGGITIGPPPAKRLLSEDDCTPEKTVPGLAGAHIKISNRGDGRNGENSLVVSMELNGVMYQGVLFAQNDSTSSTGTTHGATTNNNTKTSRGVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00718317;
- 80% Identity
- -