Mcin005784.1
Basic Information
- Insect
- Macrocentrus cingulum
- Gene Symbol
- nfxl1
- Assembly
- GCA_002156465.1
- Location
- MVJL01007118.1:79971-82837[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 1.1 1e+04 -3.2 1.1 15 19 125 129 124 129 0.81 2 22 1.4 1.4e+04 -3.7 1.3 4 10 160 166 160 166 0.86 3 22 2.1e-08 0.0002 21.4 17.9 1 19 174 191 174 191 0.99 4 22 0.95 9.2e+03 -3.1 0.8 6 10 217 221 216 221 0.85 5 22 6.1e-08 0.00059 19.9 12.5 1 19 228 245 228 245 0.93 6 22 2 1.9e+04 -5.2 1.8 10 13 252 255 251 256 0.73 7 22 0.71 6.9e+03 -2.7 1.0 5 10 269 274 269 274 0.89 8 22 0.035 3.4e+02 1.5 11.3 3 19 282 299 280 300 0.90 9 22 0.00019 1.9 8.7 14.9 1 18 335 352 335 353 0.97 10 22 0.0034 33 4.7 8.0 1 12 387 398 387 398 0.94 11 22 0.61 5.9e+03 -2.5 1.2 6 10 408 412 407 412 0.92 12 22 2.6e-07 0.0025 17.9 15.8 1 19 418 436 418 436 0.93 13 22 0.00015 1.4 9.1 8.5 9 19 484 494 482 494 0.90 14 22 0.0024 23 5.2 6.0 1 12 504 514 504 514 0.95 15 22 0.85 8.3e+03 -2.9 5.8 14 18 548 552 548 553 0.89 16 22 1.6 1.5e+04 -3.8 0.6 9 12 570 573 570 573 0.77 17 22 0.16 1.5e+03 -0.6 0.5 6 10 579 583 578 585 0.90 18 22 0.00022 2.2 8.5 5.5 1 12 589 600 589 600 0.92 19 22 0.48 4.7e+03 -2.1 0.8 6 10 613 617 612 617 0.88 20 22 8.5e-06 0.083 13.0 11.8 1 19 625 642 625 642 0.94 21 22 2 1.9e+04 -6.5 3.4 9 13 648 652 648 652 0.71 22 22 3.1e-05 0.3 11.2 11.7 1 16 687 701 687 707 0.86
Sequence Information
- Coding Sequence
- atgaagaaattcaaACATGCTCAAGCTCAAAATCAGGCATCGATCGAACGTCatttggacaaaaaaattttagattcaTCCAGTGATGAGGAAAACGAAGAAAGTGTAGAAGTCTTGCAACAAGTAGTCAATAAAACACTACTGTCTTACAATGGAGAAGGTGGAGACTCGGAAAAAGTATTATCCTACCTGACAGACCTATTTCAGTTTGGTGGCGCAGTTTGTCTCATATGTATTTcctcagttaaaaaattagacgCTATTTGGAGCTGCTCTACGTGCTACTCTTTTATGCACTTGACTTGTATTCAGCATTGGATCCGAGACAGTTTGAGCTACAAGCATGAAAAAGGAATAACACCTCTCTGGGCATGCCCAAAATGTCGCACTGACTATCCAGAAAACTCTATTCCCAAGGATTACAAGTGTTTTTGCTCTAAGACGACTGACCCGCCATATCAGGCTTGGTCAATCCCCCATTCCTGCGGCGAACAATGTTCAAAGCCTCTTCAGCCACTATGTGGTCACCGTTGTACATTACTTTGCCACCCTGGGCCGTGTCCACCTTGTCCAAAAATGGTGAAGATCTCCTGCTACTGCCAGAAGTCTCTTGCCAATCCTCGTCGCTGCAATGCGCGGGAATGGAGTTGCAACAAGCCTTGCAATATCCAACTACCAAACTGCTCACATGTCTGTCAAGAAATCTGCCACTCAGGTGCATGTCCACCCTGCTCAGAGTCCGTTCTTGCTGCCTGTCACTGTGGATctgaaaaatctttgaaaaaatgcagCGAATCGTCTTGGAGGTGCTCTAAACCCTGCGAAACACGATTCCCCTGCAAAGTCCACACATGCACAGGCACTTGTCATCGTCCCAGTGATTGTGGTGACTGTCCCTACGCTAAAAATCGCACATGTCCGTGcggcaagaaaaaatataatgtcGCGTGCAAACAGGAGACAATTCCAACATGCGGTGATACCTGTGGCAAGATGCTCGACTGCGGCAGGCACAAGTGTAACATGCGCTGCCACCCAGATCACTGTGGACAATGTCTAGAAGTGGTTACAAAGTCTTGTCGCTGCGGGAGCTACACTAAAGAACTTCCCTGCGCCAAGGAGTATCACTGCGCGAAAAAATGCACGCAGATGAGACTTTGTGGGCGTCATCCATGCAACAAGAAGTGCTGCGACTGCCTGCAGACAAACACTTTCAATCCCTGTGAAAAAGTATGCGACATCACGTTGAATTGCCGCAAGCACAAATGCCCAGCACCCTGCCACAGTGGGCCTTGCTATCCCTGCCCGAAGATCGTGGTGATCCAGTGCCGCTGCGGCGGCAGCAAGGTAACTGTGCCCTGCGGCACGAGAAAACGAATTAAATCACCACCCTGCAACCGTATGTGCAAGATACCACCCATCTGTCATCATTTGAAGCGCGAATCGCATAAATGCCACCAGGGTGAGTGTCCACCCTGCAAGAAGGTATGCGATCTTGTTCGCAAGAGATGTGGACACGTGTGCCCGGCCGTTTGTCACACAAAAGTTTGGGTGAAGGTTCCGGTTAATAATGGTGCAAGTCAACAGCCATCAGGTCCGTGGGACAACGGGCCTAAGGAAGTGTTCAAGCAGAAAACTCTCCCTTGTCCGCCGTGCGAAGTGTCTGTGATGGTCACATGCCTCGGAGGACATGAAACACGACCGTGGCCGTGTCACAAGTCCAATCCAACCTCGTGTCAACGTGTTTGTGGTCAGATTCTCCCGTGTAATAATCACACTTGCGAATTATTGTGTCATCGGCTGAAGAATGATGCTGGACGGCGCCTTTGCAAAGACTGCGAGAGACCGTGTCAGCTGGAGAGACCTCGGGGATGTTCGCATgcttgtgaaaaaatttgtcatccTGCTCCATGTGCTCCGTGCCGCCAAATTGTACGGATTCCATGCCACTGTGGCCTCAATACGCTCTACAAGCGCTGTGTTGAGATGACATCGGCCACGAGCGAGCAACGGGACGAACTTCTGAAATGTGGAAACCAGTGTCCGAGGAATTATTCGTGTGGGCATCGCTGTGTCGACGATTGTCATCCAGGGCCGTGTCGCAGCAGTGAGACTTGCAACAAGAAGGTGAAAGTTACCTGTAAGTGCTCGAGAATCAAAAAGAGTTTCTTTTGTCTGGAAGTGCAGCAAGGTAATGTTACTGTCACTTGTGACGAGCAGTGTGCAGTCTTGAAAAAGGAGAAAGAGCGGCTGAGACAGCTcgaattggagaaaaaaaagcgggaggaagagatgaaaaatcaaCGAGAAGTTGAGCGATTTGAGCGCAAGTTTAAGCCCAGGAAAAAAGGTAAAGACAGGCTGGAGTGCATGgataatgcagaaaaatatcgaatgcCGTTTTGGATAAAGGCTCTGCTTTTTGGAGCCCTCTGCAGCATTACAGTGGCCATCACTTTTTACATTACTGACAAAGGGTTTTAA
- Protein Sequence
- MKKFKHAQAQNQASIERHLDKKILDSSSDEENEESVEVLQQVVNKTLLSYNGEGGDSEKVLSYLTDLFQFGGAVCLICISSVKKLDAIWSCSTCYSFMHLTCIQHWIRDSLSYKHEKGITPLWACPKCRTDYPENSIPKDYKCFCSKTTDPPYQAWSIPHSCGEQCSKPLQPLCGHRCTLLCHPGPCPPCPKMVKISCYCQKSLANPRRCNAREWSCNKPCNIQLPNCSHVCQEICHSGACPPCSESVLAACHCGSEKSLKKCSESSWRCSKPCETRFPCKVHTCTGTCHRPSDCGDCPYAKNRTCPCGKKKYNVACKQETIPTCGDTCGKMLDCGRHKCNMRCHPDHCGQCLEVVTKSCRCGSYTKELPCAKEYHCAKKCTQMRLCGRHPCNKKCCDCLQTNTFNPCEKVCDITLNCRKHKCPAPCHSGPCYPCPKIVVIQCRCGGSKVTVPCGTRKRIKSPPCNRMCKIPPICHHLKRESHKCHQGECPPCKKVCDLVRKRCGHVCPAVCHTKVWVKVPVNNGASQQPSGPWDNGPKEVFKQKTLPCPPCEVSVMVTCLGGHETRPWPCHKSNPTSCQRVCGQILPCNNHTCELLCHRLKNDAGRRLCKDCERPCQLERPRGCSHACEKICHPAPCAPCRQIVRIPCHCGLNTLYKRCVEMTSATSEQRDELLKCGNQCPRNYSCGHRCVDDCHPGPCRSSETCNKKVKVTCKCSRIKKSFFCLEVQQGNVTVTCDEQCAVLKKEKERLRQLELEKKKREEEMKNQREVERFERKFKPRKKGKDRLECMDNAEKYRMPFWIKALLFGALCSITVAITFYITDKGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -