Mcin009960.1
Basic Information
- Insect
- Macrocentrus cingulum
- Gene Symbol
- Zfy1
- Assembly
- GCA_002156465.1
- Location
- MVJL01002984.1:17664-23010[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 3.2 4.4e+02 1.8 0.0 1 23 101 126 101 126 0.85 2 18 0.00063 0.086 13.4 3.6 1 23 133 156 133 156 0.97 3 18 0.01 1.4 9.6 0.9 2 23 172 194 171 194 0.96 4 18 0.0009 0.12 13.0 0.7 2 23 228 249 227 249 0.97 5 18 0.0084 1.2 9.9 1.6 2 21 527 546 526 547 0.94 6 18 1.4 1.9e+02 2.9 1.0 1 23 609 631 609 631 0.82 7 18 2.7 3.7e+02 2.0 1.0 2 23 802 823 801 823 0.95 8 18 0.044 6 7.7 0.1 3 23 840 860 838 860 0.95 9 18 0.007 0.96 10.2 0.5 1 23 868 890 868 890 0.98 10 18 0.22 31 5.4 2.2 2 23 986 1007 985 1007 0.95 11 18 2.6 3.6e+02 2.1 0.2 3 23 1019 1039 1017 1039 0.90 12 18 0.025 3.3 8.4 0.2 1 23 1116 1138 1116 1138 0.95 13 18 0.022 2.9 8.6 0.3 1 23 1210 1232 1210 1232 0.97 14 18 0.00039 0.054 14.1 0.7 1 23 1238 1260 1238 1260 0.97 15 18 0.0032 0.44 11.2 2.6 1 23 1309 1331 1309 1331 0.97 16 18 0.0017 0.23 12.1 3.9 1 23 1337 1359 1337 1360 0.96 17 18 0.0025 0.34 11.6 0.5 2 23 1449 1470 1448 1470 0.97 18 18 0.23 32 5.4 0.2 3 23 1479 1499 1478 1499 0.96
Sequence Information
- Coding Sequence
- ATGTCGGAGCCTTCACCGACAGTAAGGGCATTGAGGCCAAGGACTCAGCACAATGCTGGTGAGTCACGGAATCTTCACGATGAAGCAGAAGAATCGGACGGTGAAGAAGCACACAATGAGCAGATGGAGGAAATGCAGTTGGACAATAATGTCGATGAATCGATGGAACTGAGCGGCCATGACGAGGACGCGAATGCAAACAGTGAGGAGGATGATTATGATGATGAGGAGCCTCGGTTGACAATTAAAGAGGAGCCTGAGGATGAAAATTCTACTAAAACAACATTTCCCCCGCGGATTTACGAGTGTAAAACATGTGATCCTGCACCGGAATTTGCCACTCTGGTTGAATATTTGGAGCACCTGAAAAATGCACATCAGCAAAAGtcaAAGTGCCACGAATGCCCCTACTGTAACTTTATTTACCAACATTCAAACCGACTTCAACGTCATATGATGACAGCTCATAAAAACCTTCGTGGCAATGCGTCAATTAACGACAGGAGAATTCAAAAGTGTACAATGTGCACCTATGTAGCTGCTAACGCATCAGATATGGAGAGACATCATCGTCTACAACACATGACCAAACGATCCTTTTGTTGCACGAAATGCTCGTATGTAACTCACGTTCGAGCCAGGTTTACTAAACACGTTAAATACCACTCGATGCCATTGATTAAGTGTGATGATTGTGACTTTCGTACTCCGTACAAgtGGAATTTAGATCGACACACACGAAATCACGGCGGTGGCGGAGCACATCAGTGCAGAGCTTGCAATTTTACCGCTGACATACGTCAAAGTTTGACTGTTCACGAGACGAATCATCATGAGCCACCGCTGACCCAGTTTACAAAAAGGCAGAACCCGTTGGATCGAAAGCCACGGAGTATTATTAAACGTTACAACCAGGTTGGTGCCAGTGATTATCGTGATCTGCCAAGTCAAAATTCATTGTCTGCCGCAAAGACCCTTGAGGATCAATCTGCAGGCTCGCCAGATCCTTCTGCAGACGATACATCTAGTGCCATAGCTGGTGCTGAGTGTATAGCACTCAAGTGTGAAGAAAAAGGCTGTCAATTTATTACAGCCTGGGACTCGGAGATGCAGCGACACTTGGTTGAAGTTCATGGACCACTGCAGTCACCGAATAAGTCGCGCAAACCTGTACCAATGCTAATACCACTGAGTCCGGACAGTAAAGCGCAAAATTTACCAGTTTCTAATGGATCGTCACCAGTTTTACAAGTTCCACGAGTTCGAGTGAGACCTGAGCTTGCAAAAATTGCCAGAGACACAGAAATAGCAAAATTATACAGCAATCGTGAGACGATATCTGTGAAAAAAGAGGTAGGAGTAGAAAATACATTCCAGAAGAGGAATGCCAACTTCTTTGACAAACTTAAGGAGAGATTAATGACGACAAATGCCAGTGCCAGTACACCGCAGGTGGCTGTAAGTAATCCGGATGATTTCAAGTGTTGGTGCACTTTTGAAGCCAGTAGCGTGGAAAAATTGGCAGAGCACAAGAAAACCCATCACACTGCTTTAAGTGTATCGCCTGTTGGTCTCCTGAGCTGTTCAAAGTGTCAAACACGTTGTAAGAACTCAATCGATCTGCAAATGCACATGCAATTATGCAACGAAACGAGAAATAATGTAACAATTAATAGTAGTAGCGAAGAGAGCACTGTCAATGTGGCTGCATCCCAATATAACGAAGTTGAATATCCGTTTCAAGTGGATTGGGATGGGAATGTCGGTGGGCTGAATTCCTCTGAATCGTCGGTTGAAGGAGCAATCACAGCTCCACGGCGAGTATTCAAGTGTCCACACTGCCCATTTTGGGCGTCGACTGCCAGTCGTTTCCATGTGCACATTGTTGGGCATTTAAACCGAAAGCCATTTGAGTGCTCACTCTGCGCCTACAGATCCAACTGGCGTTGGGACATTACCAAGCACATAAAACTCAAAACAGCCCGCGATCCGGCCCACTTGAATGCCAGAGTTTTAATGACAGACGAGACTGGCCGAAGAAATTACTCCAAGTACAATAAATATCTTGCACagatGGATCCACAAAATGCAGAGGAAAGCAATCAGAATGAGAGTGGTAAAAGCAGTGACACTCAAGGGGAATCTTCAAAGCACTTAATAGTGATGGATACCAAAGATGATTCACTGTCTGCTACAACGCAGATTCTGTACAATAAGTCGTCTACAGGTAGTATTGAAAGTTCATCGCCGTCAAAGCCGTCGCCACCGCCTTCGGCTGCTAGAAGCCAGGGACAGTCTCTGTTGAAAAGTTCAAATGGAAATTCCCCATCGTCGTCGGCGTCTGTTTCAGCGGGTACCACAGGACCTTCTACCTCGAGCGAAGAAACTAAGCGTACTCTGTGGAAATGCAAAAGATGCAATTATCGCGATTCGAATAAAGATATGGTACTGCTTCACGTGAAATCCCACTATGATGCAATGGAACATTCCTCAGAAACTGATAAGAATCCACTTGCTTGCAAGGACTGTCCATTCATTGCTACGGATGCTTCAGCACTTGCACTTCATCAGATTCATCATCGTCCAAATCTCGAGGCTATATTCAAATGCTACCTCTGTCCGTATTATGTCAGTACAAAAACtgAACTTTTAGAACATGCTCGACTTCACGGTGAGGAGCTTGCATCGGTACATCAGCAACGTTCGGGCGGATCGGATGGCACgcaaaaaaagtcaaagaGTGTAATTCGAGCAGGCTCAACAAATTCTGTGCCTCAAATGGACATTTCTGTTGAAGAAATTGCGCCAACGACAAGCCCACTATTGGCCGCAGCTGCGGCAAAAACGAGCGATGGATCATCCGTTACACCGCCGTTGCTTCTAGACACTCGAGCGCTGCCCGACACACCTCTCGTCTGGGTCTCTCGACCCGATGAAACTTTTGCAAAGATGCTCAAGTGCCGTCATTGCCCTTACGTGTCGTCCAGGCGAGCCGAGGTGCACGATCACGAGACGATGCACGCGCTGTCGTCGAAAACTACTCAATCCATTGCGTGTCCCGACTGCAGTTTTAGCTGTTACTTGAAGGAAGTGATGGAAACCCACGCGGCAATGCATCAGGGCGCCTTGGGCACAGTCCACTGCCTTGTAGACAACAATCGCAGAGACGCTCAGCAGCTCGAGGACCTCACGGCACTCTTGGGTCTCGCGAAAACTCCGACATTGGGTCCAGAGCCGGATCTCTACGATGCTCGCCTGGTACACTGCTGCAGCAAGTGTCCGGCCCGGTTTCTCTGCGAAAAAGACCTACAAATTCACCTGAAATATCACTCAACCGACCAGGCATACGCTTGCGAATGGTGTTCATACCGTGCAAGGCAGCCAAATCACTTGTCAGCTCATGAAAATGCCCATTCCACTGAATACCAAAATCGATCACGATACTTGCTGTCCTTATACGGTCATTCACAGCGTTTTCCACCACCTAGAACGACCTGCATTGAGGTGAAGAAtcgacaggaaaaaaatggcatGGATGTCGCCTGGATTGTAGTGACTAGTGTGACAagtccaataaaaaatttccacattaCTCCAACTCCTGCACATAGAATTGAAAATCAAGTGTTTACCTGCGCTAAATGTCCTGCTAGATATTTTAAACTCGACGCGTTAGAGTATCACATGACACTGCACGGATCAAACAATAGATTTAAATGTTCAGAGTGTGATTATTCATCGAAAACCGGACAGAATCTTTTAAAACACCAGGTCGTTCACAGACGACACACAACTGAGTCGAGTGAACCGCCTCCAACTAATCTACAACCACCGTCAGATCCTCAGTTTAGCAATTTTATAAGAGGCAatccaaattttgtttatcagGGATACATGAGGAACGGTCGATTAAGGGAAAAGCGTTACAAGTGCCATAAATGCCCGTCGGCGTTTGAAAAACGCGAGCAGTACCGCGTGCATTTGACTTTGCACGGTGCTAAGCAAAGATATCGCTGTGATACGTGTGATTACTCGGTGAAATACTATGCTAACTATATgcaacacttgaaaaaacatcATGCCAATGCTGAGGCTCAGGCTAGCAAACGAAAAATGGAGATGCTGGTGGATAGTAATGAGGCAGTTGTGGAAATTGAGAGTAAGGAAGTGACGAAATCACGGCGCAAATCTACAATCTCATCTGGCGCGACTTTTGCATCAACTGTTTCGCCGGTTGACACTGCTTCGGCCATGTCAATTTCCAATCAAGATAAGCAGTCACTTTTACTGATGCAGAAAAAAGGAATTGCCACGACGGCGGatgaaaatcaaatgaaatccTTGCGCTGCAACGAGTGTCCATTTTCGTCGTCAGACAAGGAGGCACTCGATATGCACAAGCGTCGTCACGGTCTTGAAAGACTCACTCCGCCTTGTCCACACTGCAATTATGTCCCGAGAAAAGATGAAAATCTTGGTGATCACATTAGACTTCATTTTACAAGAATATGCAAGCCAGAATCCTACTTGGTCGTGGAATTACTCTCATTGACCATGCAGAGAATTAATGTCGGTGAGAAAAACGATAAGAGTGAGCAGTTGCTCTTTCGTGATTGTGGTGACGGTAAATTTTTACCGATTAACAATTCCAGTTTACTATCAAACAACGTCTTAAATGGAAATGGACTTCAAGAAAAAGTAGTAATTGATCCAAACACGGGTGAAGCTACTCGCTTTACTGCTTGA
- Protein Sequence
- MSEPSPTVRALRPRTQHNAGESRNLHDEAEESDGEEAHNEQMEEMQLDNNVDESMELSGHDEDANANSEEDDYDDEEPRLTIKEEPEDENSTKTTFPPRIYECKTCDPAPEFATLVEYLEHLKNAHQQKSKCHECPYCNFIYQHSNRLQRHMMTAHKNLRGNASINDRRIQKCTMCTYVAANASDMERHHRLQHMTKRSFCCTKCSYVTHVRARFTKHVKYHSMPLIKCDDCDFRTPYKWNLDRHTRNHGGGGAHQCRACNFTADIRQSLTVHETNHHEPPLTQFTKRQNPLDRKPRSIIKRYNQVGASDYRDLPSQNSLSAAKTLEDQSAGSPDPSADDTSSAIAGAECIALKCEEKGCQFITAWDSEMQRHLVEVHGPLQSPNKSRKPVPMLIPLSPDSKAQNLPVSNGSSPVLQVPRVRVRPELAKIARDTEIAKLYSNRETISVKKEVGVENTFQKRNANFFDKLKERLMTTNASASTPQVAVSNPDDFKCWCTFEASSVEKLAEHKKTHHTALSVSPVGLLSCSKCQTRCKNSIDLQMHMQLCNETRNNVTINSSSEESTVNVAASQYNEVEYPFQVDWDGNVGGLNSSESSVEGAITAPRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIKLKTARDPAHLNARVLMTDETGRRNYSKYNKYLAQMDPQNAEESNQNESGKSSDTQGESSKHLIVMDTKDDSLSATTQILYNKSSTGSIESSSPSKPSPPPSAARSQGQSLLKSSNGNSPSSSASVSAGTTGPSTSSEETKRTLWKCKRCNYRDSNKDMVLLHVKSHYDAMEHSSETDKNPLACKDCPFIATDASALALHQIHHRPNLEAIFKCYLCPYYVSTKTELLEHARLHGEELASVHQQRSGGSDGTQKKSKSVIRAGSTNSVPQMDISVEEIAPTTSPLLAAAAAKTSDGSSVTPPLLLDTRALPDTPLVWVSRPDETFAKMLKCRHCPYVSSRRAEVHDHETMHALSSKTTQSIACPDCSFSCYLKEVMETHAAMHQGALGTVHCLVDNNRRDAQQLEDLTALLGLAKTPTLGPEPDLYDARLVHCCSKCPARFLCEKDLQIHLKYHSTDQAYACEWCSYRARQPNHLSAHENAHSTEYQNRSRYLLSLYGHSQRFPPPRTTCIEVKNRQEKNGMDVAWIVVTSVTSPIKNFHITPTPAHRIENQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCSECDYSSKTGQNLLKHQVVHRRHTTESSEPPPTNLQPPSDPQFSNFIRGNPNFVYQGYMRNGRLREKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCDTCDYSVKYYANYMQHLKKHHANAEAQASKRKMEMLVDSNEAVVEIESKEVTKSRRKSTISSGATFASTVSPVDTASAMSISNQDKQSLLLMQKKGIATTADENQMKSLRCNECPFSSSDKEALDMHKRRHGLERLTPPCPHCNYVPRKDENLGDHIRLHFTRICKPESYLVVELLSLTMQRINVGEKNDKSEQLLFRDCGDGKFLPINNSSLLSNNVLNGNGLQEKVVIDPNTGEATRFTA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -