Mcin005485.1
Basic Information
- Insect
- Macrocentrus cingulum
- Gene Symbol
- -
- Assembly
- GCA_002156465.1
- Location
- MVJL01004791.1:25767-32550[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.04 5.4 7.8 0.3 3 21 146 164 146 165 0.95 2 20 0.3 40 5.0 2.2 3 23 173 194 172 194 0.94 3 20 0.011 1.5 9.6 7.9 1 23 204 227 204 227 0.95 4 20 1.5 2.1e+02 2.8 0.1 5 23 609 628 608 628 0.90 5 20 3 4.2e+02 1.9 5.4 2 23 635 656 634 656 0.95 6 20 0.0013 0.17 12.5 6.3 1 23 683 706 683 706 0.96 7 20 0.007 0.96 10.2 0.2 2 22 814 834 813 834 0.93 8 20 0.0059 0.81 10.4 0.1 2 23 842 864 841 864 0.95 9 20 0.0056 0.76 10.5 3.0 2 23 874 896 873 896 0.93 10 20 1.2 1.6e+02 3.2 0.6 2 19 917 934 916 934 0.94 11 20 0.0012 0.16 12.6 4.4 3 23 980 1001 979 1001 0.96 12 20 0.042 5.7 7.7 0.0 2 20 1031 1049 1030 1051 0.91 13 20 0.22 30 5.4 2.1 1 23 1058 1081 1058 1081 0.96 14 20 0.00071 0.097 13.3 0.3 1 20 1175 1194 1175 1196 0.93 15 20 0.003 0.41 11.3 0.6 1 20 1286 1305 1286 1307 0.96 16 20 0.004 0.55 10.9 3.1 1 23 1314 1336 1314 1336 0.98 17 20 1.4 1.9e+02 2.9 2.7 1 19 1351 1369 1351 1374 0.75 18 20 0.4 55 4.6 2.6 3 23 1579 1599 1578 1599 0.98 19 20 0.019 2.6 8.8 0.5 2 23 1693 1715 1692 1716 0.95 20 20 8.8 1.2e+03 0.4 0.4 3 23 1751 1768 1750 1769 0.79
Sequence Information
- Coding Sequence
- ATGGCCAGGGTACTCGTATATTGCGGTTCACCAACCGTAATTCCAGTATTCGATGCTAAGAAAACCCACGTAATTACCCATGAAGTGTGGGATACGAAGATCAAGGAGGAAGCCGAGTCCACGCCGAACGAGGACGAGGGCGGGCCCCCAGATTCCGACGATGACGGATCTCAGGTTGCTGCGAGGACCCGATATCTCCACATTCCAAAGAAGGATCGAGTCTCTCAACGTGAAAGCAGCGAATCACGAGGTTCGTCCGCAGAGCGTGAGACTTGCGATGATACTGTTGACGTTACCTCTAGACATAAGCCACACGTTCGTGAAACGCccgagaaaaatattacataccCTAGTACAGCCAGTCCTATGAATTCAGTAGTATCAGTTGGATCGCGTGAACCTATGCCTCAGGACGTAGGAATGGGTGAGGTAGGGTGTACAGTTTGTTTCGAGGTTTTTTCCACCATGGCTGGCTATAAGCATCATATTAATCGTGTTAAACGGGGCATTTTATTGTGTCACATATGTCGAAAAATCTTTCATAATGCTAACGAATTTGGCATGCATCGTGCATCTGAGCACAAAAACGCGGATTGGAGCaattatcgatttaaatgttattattgtaatttacgttttacgaaaaaaaatttacttcagCAGCatattcatcattttcatgACTTGGTTGATATTTTAGATACGACGCAGCGTACAAACATGGAATATCTCGAGATTCAGGGAGAGGAGATCATGCCAAAACGGGTGCGGGTAGTTCAAAAGAAAAAGCGAAAGAGAAGGAGGAAAATAGCTAATTCAGAGCCTGACTTAcctgtggtaaaaaaatttaaacgttTCTTAGCTACTTCGACATTAGATAAGTCTGTCGATGAAATTGTCAAGGATATTTCTAATCGCGCGGAAAATTATGTTATTCGTGAGCCATGCTCGCCGCCAccgttgataaaaatatcgtcGTCCGAGGTAAAAATATCTAGACGTATGCAGACAACAACTTCTAGCATGTCAGTAGAATCAGATATTAATGACATCTCGAATTTAAATCATACAGGTAGTAATTTCAGTGAGGTAGCATTGCCgccattgataaaaatatcgtcGACTGTGTATGAGGGGGACAGATCCAATCGATTGCCGGCAATGTCAGATGCAGATATTTCAATAGAGTCAATAGTTAATGATGTTTCTAATTCGAATCATACTGAAAGTAACACTGTGGACGACACATCTGCACCACCGCCgttagtaaaaatatttgcgattCCAAATGAGGTTGAGGCTTTGTTAAAATCTGACGGGAAAAATTCGAGGAAGCGAGCGCGAGAATTCGGCGATAGACCTGATAGAGAAAATATCTCACAAGTGAGTCGTGCTACTGAATACAAATATCGAACGCCTTTACGATCAACACCGCTGAAGCTTCCGCCAACTATTGCACCACCGCCATCAACTTTGCAACATTGGGCCATGCTTCGTCGGCGTTTTAATTGTCgcgagataaaaattcaattagagAGAATTGACGCTCCTCAGCGCTGCTATATCCCAGAAATGTCTGTCGAAGCAATGgagaataattttgaaaatgaattacCAGTGTGTAACGATAGTGTGAGCACTACAAGCTACGACAACAAGCGCAGCGTTGGAATTGAGCTACAAAATCTCAACCTTGCCTTACAAAAATTGGGCAAACTTCAGGATGACGGAGTGGAAAGTGAAGATATCTTGAAGATTCcagtaaatttaaaagatGGACATCTTGTATTATCGAAGAAAAGCCGACCATTTTATCGCTCAGCCGTgtgtaaaaatcgattttcatcGCAGAAACGATTGGTTGCTCATTATTTGGCGTATCACCGCGGTTCCACACGTCTGGAGTGCGGCGTCTGTCAACATATGTGCAGTGGAAAGACAGACTACCACAAACACCTAACGCAGCACTGCCTGCCAATTTCAAAAACAGAGGAGGATGGTTCACCATTCGATATAAAAGGCCCCTGCGAGcgattcaagaaaaaattcacctgcagaaaatgtaaaaaaacattttcatcgAATTTAATGTTGACAACACATCAGAAGCTTTGTCACAATCAGCAGTACAGCCGCTCCAACAAGTCTTCCGTGAAAAATCGACGCAATGTACCTTTGGTGACTCTGGACGACGAAGAAAACGATCGCGTGCAGCCAGTTAAACGTGAGCCCCTCCTGATAGAGGACGACTCGGAGGTTGAGTTTATCCCTGAAAGAAGGAGGCTCGATGGTAGTCTCATATCAGCGCCAGTGGCGGAACATCACGATCATTTCGCTGCAGTAAATTCCTCCTTCAGCGCAGTGAATAATATGGATCCGCTCAGACGAATGTCGTCTTCAAGTTGGCGATCGGCTGAGAGCACTGTGCTCGCCGTGTGGCCCTGCACGGTGTGCAATACACAGTTCCGCCtgccggaaaattttttgcaacaccaGAAAAAGTATGctgtgagtaaaaataaaGAGTGCGTACAATGCGGCACGAAATTTCCCTCGCTAGAGCTGTACAATATTCACGTTCGTTACGCTCATACTGCTGAAAATCCACACTACAGGAGTCGATGCCTAGCGTGCAATCAGACTTTCATCACGCGGGATTATCTACGCCATCATATTATGCACATTCACGGCGAGGAGCTGCGTCAGTTGACTGAAGACCCGCAGCTGCCGTCTGCTTATGTGGAGATGGAGTGTCGCACGTGCAGCGTGATTTTTAAGAATCGCAGACACTATCTCGAGCACTGTTTGTACTACTTTGACGATGATCTGCATGCTTGCAAGGTGTGCGAAAGGAAATTTTTCGGGCGATACAAGGCACATTGCCACATGAAGAAGGAACATTTCTCCGAGGAAAGGCAGAAAAAATACGTGAATCACTGTACAGAGTGTGAGGAGAGCTTTATTTACGAATCACATTTATATTCGCACATGCGCCACGTACATCCTCACATACCCAGTCCAAggagaaatatttcaaatgataGAAACATGCGTGTTTGGGACAAATCGGTGCAGTTGCCGTCCTCATTGGTGTGTCATGTGTGCGATGAGCAATTTGATAGAATTGAACTTTTAATCGATCATGAGATGGAATATTCTAATCAGGGTGGCTTTCGGTGTGCGCTTTGctatcgcaattttttcacctctaTCTTGTTAGGTCATCATGTTAAATATGAACATGCATTCACTTGTAAagagggacaaaaaaaatgtatgcatTGTCAGGCTTTGATACTTGAATCTTCGTTCAATGCTCACGTAAAACATTTTCACAACAATGATCCGGGAGAATCGACGCTTGTTCGCGGCAGTATTTCCAGCTCTGTGCAAGATGCCGATGTCACCAGTACTATGAGACTTGAGACTGGTAAATCCACGGATTTTCCCGCTGATTCCATGCACGATGGTGATGATATACTGAGTACTCCGGAAAATGTCGATCctcaatataaaattgagtACACTTGTGCTCTCTGTGacctaaaattttcatcttcaaGTGCTCTACGGCTTcacagtcaaaaaaatttatgcaataCCAATGAATTTGTGACTTGTCCACGTTTTTCTGACACTGATGAGCCTATTAGTGTTTGTAATGCCGAGTCTAATGTTAAGATTTCTGATATTTACTCGGTTGATTTGGCCGAGTATGAAAAAATCCGCgataatgataatgataatgataatgacagtattaataaatttgattcgTTGAAAATTACTGAGGAAATGCCACAGGATGAAGAGGAGGAGCAGGAGATGtcggaaaatgataaaaattcggATGATTATACTTGTAAAACTTGTAAAATTAAGTATTACACTTCGATTGCTCTGCGTAAACATCAGGAGGAGTATGCTAATGCTGGTGATTATGTGTGTAACTACTGTCCGAggaaatttccgaaaaaaCATTGGTCTGAACGACATGAACGAAAACATAAATTACGAAATATCGAGCAAGCTAAAGGTATATCACcaatttattattgtgaaaCATGTGATGAAAAGTTTGCCAGTACTAGAATGAAGCATATACATTTTGCTCATATTCATCGGCTATTGCTGTCGGCGGCTGAGGAGGCAGAAATCGAGCGAGAACGTCGGCAAATGCGCAAGAAACAACTTGAAGATCGTTTGCGACAACGATTGCCacaaatacaaacaaaaataacggATTATACATCACCGATTATTAAGATGACGACGTCACCTCCTGAAATATCTGAGCCGGTATCATCGATAAAGCAGGAGCAATTGCCAATGAAGTCACCGGAAAAACATATTCCACAAAGCccgaaaaaatctaaaaattcaagGAAAAAGTCATCGCGTAAAAAATCTAAACGATATGTAATAAACCATACTTTTGATAATCCATTAATTATTACAGAAAATCATGTGTCAATTAATGACTATCCAATTCTGGAAAAGTCGAAATATTGTCAGTGTGATGAGCATGACGAGGAGGGACTTGCTATGGAAAAATCATTGCAGGCATCACTATTTGAGGATGCCTCATCGTGTGCAAGAACTAGACCAAGAATTCCTACAAAAAGATTTAAAGTAAAAACTTcacatcttgaaaaaattattaaaaaagagtGTGAGcttaaacttttgaaaatgaaaaaacaaaaaaaagatacagAATATGCAATAACACTGTGTGATGTTTGTGGACTTGTTTTTAATTGCAAGCGAGATTTGCGCTTTCACCAAAAGACTCATTTGACAACGATAAACGatgaattattggaaaaacAGAGCGTAGAATGCCCGGCAGAAGCCGGGGCGACTGGTGAAGACAGAGCATCTAGTGAAGTGGAAAAAACAGTGGAACCACCAGCACCATCCGTAgaagaggagaaaaaagaaaaacctgTTACTTCATCGCAAGTTTTGAAGAATTCTCcgtcaattataaaattacccTCGCCATATTCAAATAAAAGCCAAATTATTCACACATTGCTGACTGTGAAACGTGAGCACGATTACAATCAGGTCGAGTGTAAATTATGTCCgggaaaatttagaaattcgGAATTGTTAGgtgaacatttaaaaaatgtccatCATCTTGCACCAAATCTCCGCACTCAAGTGTGCGATCCGATAATTCTTCGTCGGCGACAAATGACCTCAAATTATCCAGAATCACCGGAATCTACATTCAATTATTGTACAATTTGCGATGAAAGAGTTGGCGAATTGGAGGATCATATTGTCACACATCATAGTTCAGTAACAACAACATTTCCAACCATTTGTGAATCGCATCCACCGCATGCAAtcagtacaaaaattaaaccaCGGGTTGAGACAGAGACTTTAACACCTCGGACGACACTAACTGCGACTCCcctgtcgaaaaattttcccgGACTCGGAATCGTGCGTAATATTACTAATGCAAAGCCGAAAAATAATCCGTCAGTTAGTGGAACTAGTGTTTTTACAgcttcaaatttaaaaaacacagAAATTATCGTTGAAAGTGGTAAAatatcgaatgaaaaaattttaataaccgATTCATCAACATCTGATTCAAGTGGGATTAGTATCGTTCAAACAGGCCCTCAAGTATATCAATTGATTCCTATTCCAGCCAAGTCTGTGTTAGTACCGAACTATAAGTCGTTTATAAATCTCCCCAAGTGA
- Protein Sequence
- MARVLVYCGSPTVIPVFDAKKTHVITHEVWDTKIKEEAESTPNEDEGGPPDSDDDGSQVAARTRYLHIPKKDRVSQRESSESRGSSAERETCDDTVDVTSRHKPHVRETPEKNITYPSTASPMNSVVSVGSREPMPQDVGMGEVGCTVCFEVFSTMAGYKHHINRVKRGILLCHICRKIFHNANEFGMHRASEHKNADWSNYRFKCYYCNLRFTKKNLLQQHIHHFHDLVDILDTTQRTNMEYLEIQGEEIMPKRVRVVQKKKRKRRRKIANSEPDLPVVKKFKRFLATSTLDKSVDEIVKDISNRAENYVIREPCSPPPLIKISSSEVKISRRMQTTTSSMSVESDINDISNLNHTGSNFSEVALPPLIKISSTVYEGDRSNRLPAMSDADISIESIVNDVSNSNHTESNTVDDTSAPPPLVKIFAIPNEVEALLKSDGKNSRKRAREFGDRPDRENISQVSRATEYKYRTPLRSTPLKLPPTIAPPPSTLQHWAMLRRRFNCREIKIQLERIDAPQRCYIPEMSVEAMENNFENELPVCNDSVSTTSYDNKRSVGIELQNLNLALQKLGKLQDDGVESEDILKIPVNLKDGHLVLSKKSRPFYRSAVCKNRFSSQKRLVAHYLAYHRGSTRLECGVCQHMCSGKTDYHKHLTQHCLPISKTEEDGSPFDIKGPCERFKKKFTCRKCKKTFSSNLMLTTHQKLCHNQQYSRSNKSSVKNRRNVPLVTLDDEENDRVQPVKREPLLIEDDSEVEFIPERRRLDGSLISAPVAEHHDHFAAVNSSFSAVNNMDPLRRMSSSSWRSAESTVLAVWPCTVCNTQFRLPENFLQHQKKYAVSKNKECVQCGTKFPSLELYNIHVRYAHTAENPHYRSRCLACNQTFITRDYLRHHIMHIHGEELRQLTEDPQLPSAYVEMECRTCSVIFKNRRHYLEHCLYYFDDDLHACKVCERKFFGRYKAHCHMKKEHFSEERQKKYVNHCTECEESFIYESHLYSHMRHVHPHIPSPRRNISNDRNMRVWDKSVQLPSSLVCHVCDEQFDRIELLIDHEMEYSNQGGFRCALCYRNFFTSILLGHHVKYEHAFTCKEGQKKCMHCQALILESSFNAHVKHFHNNDPGESTLVRGSISSSVQDADVTSTMRLETGKSTDFPADSMHDGDDILSTPENVDPQYKIEYTCALCDLKFSSSSALRLHSQKNLCNTNEFVTCPRFSDTDEPISVCNAESNVKISDIYSVDLAEYEKIRDNDNDNDNDSINKFDSLKITEEMPQDEEEEQEMSENDKNSDDYTCKTCKIKYYTSIALRKHQEEYANAGDYVCNYCPRKFPKKHWSERHERKHKLRNIEQAKGISPIYYCETCDEKFASTRMKHIHFAHIHRLLLSAAEEAEIERERRQMRKKQLEDRLRQRLPQIQTKITDYTSPIIKMTTSPPEISEPVSSIKQEQLPMKSPEKHIPQSPKKSKNSRKKSSRKKSKRYVINHTFDNPLIITENHVSINDYPILEKSKYCQCDEHDEEGLAMEKSLQASLFEDASSCARTRPRIPTKRFKVKTSHLEKIIKKECELKLLKMKKQKKDTEYAITLCDVCGLVFNCKRDLRFHQKTHLTTINDELLEKQSVECPAEAGATGEDRASSEVEKTVEPPAPSVEEEKKEKPVTSSQVLKNSPSIIKLPSPYSNKSQIIHTLLTVKREHDYNQVECKLCPGKFRNSELLGEHLKNVHHLAPNLRTQVCDPIILRRRQMTSNYPESPESTFNYCTICDERVGELEDHIVTHHSSVTTTFPTICESHPPHAISTKIKPRVETETLTPRTTLTATPLSKNFPGLGIVRNITNAKPKNNPSVSGTSVFTASNLKNTEIIVESGKISNEKILITDSSTSDSSGISIVQTGPQVYQLIPIPAKSVLVPNYKSFINLPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -