Basic Information

Insect: Macrocentrus cingulum
Gene Symbol: -
Assembly: GCA_002156465.1
Location: MVJL01001477.1:174813-176954[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0065 0.88 10.3 0.1 1 23 319 342 319 342 0.94

2 10 2.7e-06 0.00036 20.9 0.5 1 23 348 370 348 370 0.99

3 10 5.8e-08 8e-06 26.1 0.3 1 23 376 398 376 398 0.99

4 10 0.029 3.9 8.2 2.6 1 23 404 426 404 426 0.98

5 10 4e-06 0.00055 20.4 0.3 1 20 432 451 432 452 0.96

6 10 0.019 2.6 8.8 2.4 1 23 461 481 461 481 0.94

7 10 8.2e-07 0.00011 22.5 0.5 3 23 489 509 488 509 0.98

8 10 8.2e-05 0.011 16.2 1.4 1 23 515 537 515 537 0.98

9 10 0.0074 1 10.1 2.8 1 21 543 563 543 566 0.96

10 10 9.3e-05 0.013 16.1 1.8 1 21 572 592 572 593 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0065	0.88	10.3	0.1	1	23	319	342	319	342	0.94
2	10	2.7e-06	0.00036	20.9	0.5	1	23	348	370	348	370	0.99
3	10	5.8e-08	8e-06	26.1	0.3	1	23	376	398	376	398	0.99
4	10	0.029	3.9	8.2	2.6	1	23	404	426	404	426	0.98
5	10	4e-06	0.00055	20.4	0.3	1	20	432	451	432	452	0.96
6	10	0.019	2.6	8.8	2.4	1	23	461	481	461	481	0.94
7	10	8.2e-07	0.00011	22.5	0.5	3	23	489	509	488	509	0.98
8	10	8.2e-05	0.011	16.2	1.4	1	23	515	537	515	537	0.98
9	10	0.0074	1	10.1	2.8	1	21	543	563	543	566	0.96
10	10	9.3e-05	0.013	16.1	1.8	1	21	572	592	572	593	0.94

Sequence Information

Coding Sequence: atgactaatACACAGCAAACAATATTAGAAGAAGTTTCTGCATCGGAGCAACCGCAAGAGGAAGTACAATTGACCGAACTTCGTCCGGTTGAGCATTCGcggattaaaaaatcaaaaaatgacCAAGAAAATACGACGGATGGTTTGAAAGCTTTGCGAAGCATTTCTGAAGAAACGGGCGAAgatttaaatgaagaaaatttcgaattaattCCTGCGACAAATGCAAAAACCAAATCAacctcaaaaacaaaaagaaaacgcGGTAAAGCCCGGAAATCGACGGAACCAAATGGAAATATTGATGATCAAGAGGGCACAGAAGACCACGATGTCGGTCGGATGACAACACGAAGAAGTCAACGAGTCAAGTGTTCAAAAATAATCCCGTGCGGGTCGTCGTCAAGTGAGTCTGTATCTCACAGCGAGTGGAGTGAGTCTGAAATGGAGGAGGACGATGACAATGACAtcgtgaaaaagaaaaagaaaaagatcaTACCAATAAAAAGCccaaaaaagaaaagtaaaCGTTACTTCAAAGATGAAGTATACAATTATCGTCAAACTGAGGATGATGACAGTGTGCGAAATAATGTGTTCAAAGACAtggcgaataatttttctaatacaaGCTCACCCtcaaaatcaccaaaaaatttcaagcctAAAATCAAAACCTCGGATAAAAGCACAACAAAGAGCGTGAGTACAGATGCGCCAAGTGAGGAGGAAATAAGACTGAAAATAGGAGAAATAATACAATCAAACTATCGTAAAGAGCAAGAAAATAACAATCAGGAGGATGTCAATCAAATGGAGGAGGACGAGGAGGACGTGGATGACCCACCAAATCCATCTCAATCAAGTGAGAACAGTGAGTTGGCAGAGCTGCCAAACAAAATGTCGAAAGACCAGATGACATGTACGAGTGAGGATCAGatggaggagaaaaaattcgtttgtaTAATATGCGACGCAAAATTCAAAGGTAGCGGAGGCCTGCGAAACCATTGGAAAGTAATGCACATGGAGGGACCACTGTTCAAATGCGACGACTGTGGCAAAGAGTTTCCCCTGAAGGAGCGTTTAAAGCTTCACGTTAGAACACACACGGGTTTTAAGCCCTACAAGTGTCCTGAGTGTGATAAAAGCTTTGCCCGTGGGGGTCAGTTGGCGCAGCATCGTCGTACCCACAGCCACGTAAAGCCCTATCACTGTACACTGTGCACAGGATCATTCACATGTGCTGCTAACTTGGCGCTACACATAAAACGTCACAATGGCCAGAAAGATCACAAGTGTGAAATTTGTGGACGTGAATTTATCCGGCGAGACGCGTTAAAAAAACACCTTGATTGTCTTCACAAAGATGTAAAATCATTCCTCTGTGTGATatgtaataaaacatttaaaggCCACTTGCCTCAACACATGAGAACTCACTGTCAAGACAAGCCCCACGGTTGTGCTACGTGCGGACAGAGATTTGCGCAAAAATCTCAACTAACAGTCCACCAAAGGACCCACTCAGGCCAGCGACCCTTCAGATGTCTCGTTTGCTGGCAAGCTTTTGCCCACTCGACAGCCCTAAAGCTCCACACGAGACGACACACTGGTGAAAGACCATTCAAGTGCGCTATGTGTAGCGCTGGCTTCACCCAATTGCCCCACTGGAAGAAACACATGAAGTGTATTCACGGCAGATCTAAACCCTACAGTTGCAAGCACTGCAACAAGagttataaaatgaaaaatgaccttgagagtcatgaaaaaatttgtgtcgATGAGAATCCAGGAAATAATATTGACTATCTTAAAGGGGCCGATCCTAATGCATTTAAAGCCATGTCAGTGGAGAAAATGAGGCTGCTATTGGCCGTCTTATTAAAACGTATTTCAAAACCAGAAAAATTAGATGAGCTAGGCTTTGGTAAGAGACTTATAGATGAAATTATTCAAGATTCTTTGGAAACTGCGGGAAAAGAACCAGCTAAAATTGGTGAATTTACTGAACTTGAAGCActgcgaaaaaatttagagatgtTTCTTGAATGGACTGTACCCAAGGAGCATTGGgaggcttttaaaaaaatgaataaaaatgccGAAGAAATCCTAGAGACTCTCACTGCCACGTAG
Protein Sequence: MTNTQQTILEEVSASEQPQEEVQLTELRPVEHSRIKKSKNDQENTTDGLKALRSISEETGEDLNEENFELIPATNAKTKSTSKTKRKRGKARKSTEPNGNIDDQEGTEDHDVGRMTTRRSQRVKCSKIIPCGSSSSESVSHSEWSESEMEEDDDNDIVKKKKKKIIPIKSPKKKSKRYFKDEVYNYRQTEDDDSVRNNVFKDMANNFSNTSSPSKSPKNFKPKIKTSDKSTTKSVSTDAPSEEEIRLKIGEIIQSNYRKEQENNNQEDVNQMEEDEEDVDDPPNPSQSSENSELAELPNKMSKDQMTCTSEDQMEEKKFVCIICDAKFKGSGGLRNHWKVMHMEGPLFKCDDCGKEFPLKERLKLHVRTHTGFKPYKCPECDKSFARGGQLAQHRRTHSHVKPYHCTLCTGSFTCAANLALHIKRHNGQKDHKCEICGREFIRRDALKKHLDCLHKDVKSFLCVICNKTFKGHLPQHMRTHCQDKPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHTRRHTGERPFKCAMCSAGFTQLPHWKKHMKCIHGRSKPYSCKHCNKSYKMKNDLESHEKICVDENPGNNIDYLKGADPNAFKAMSVEKMRLLLAVLLKRISKPEKLDELGFGKRLIDEIIQDSLETAGKEPAKIGEFTELEALRKNLEMFLEWTVPKEHWEAFKKMNKNAEEILETLTAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -