Mcin006690.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Macrocentrus cingulum
Gene Symbol
Zbtb41
Assembly
GCA_002156465.1
Location
MVJL01005266.1:10053-13341[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 7.8 1.1e+03 0.6 0.2 3 12 177 186 176 191 0.88
2 16 0.12 16 6.3 1.3 1 23 411 433 411 433 0.93
3 16 0.00069 0.095 13.3 0.7 2 23 444 466 444 466 0.93
4 16 0.00015 0.021 15.4 0.2 1 23 473 495 473 495 0.98
5 16 3.2e-06 0.00044 20.7 2.6 1 23 501 523 501 523 0.96
6 16 9.5e-05 0.013 16.0 1.9 1 23 532 554 532 554 0.97
7 16 1.3e-06 0.00018 21.9 0.8 1 23 560 582 560 582 0.98
8 16 8e-07 0.00011 22.6 0.3 1 23 587 609 587 609 0.98
9 16 0.013 1.8 9.3 3.8 1 23 616 638 616 638 0.98
10 16 1.4e-05 0.0019 18.7 0.5 2 23 658 679 657 679 0.97
11 16 0.00075 0.1 13.2 2.0 2 23 687 709 686 709 0.96
12 16 0.039 5.3 7.8 3.1 1 23 715 737 715 737 0.97
13 16 0.0025 0.35 11.5 3.2 1 23 743 765 743 765 0.98
14 16 1.9e-06 0.00025 21.4 2.2 1 23 771 793 771 793 0.96
15 16 2.4e-06 0.00033 21.0 1.1 1 23 799 821 799 821 0.97
16 16 0.00016 0.021 15.3 0.2 2 23 828 850 827 850 0.96

Sequence Information

Coding Sequence
atgaaGATAATATGTGCTGCATCATCGTGTAAATATTCTTCCGAAAATGAAGATTCAAGTAATACCGTATTTATCAGCTTTCCAAATGATGAAACATCGACAATTTGGGCTCATAATTGTGGCCGGCCGGACTTGATGATTAAATCAAATGAAGAATTACATCGTAATTATTACATCTGTTCAAATCACATTGAGGATCGATTTTTCCTCAGCAAATCAAATGAGCTATCAATCGCCGAGGGTGCAATTCCAACGCGATTTTTAATGGATTGTCAATCTCCCGACTTTCATCACACCCACAAGGAGCAATATTCTCCAGATAACGTAGTAGAATCCCTACAATTAACCAACTGCATCAATAATTCTTGTCCACTGCCGAGTTCCGAGTATGAAAACACTCTGTACAATGCGGAATTACACGAGGACAATTGTATGACCACGGATGACAACACATCTGCAGATAATCActcaaatttttgtaatatcaGCATGAATATGAGTGAAATGACCGTGAGATTCAGCGATTTATGTCGAATTTGTGGACAAACAACTACTAAtggatttaatattttcaaaagtgaTAATGAACTGAAGATTAAGGATAAAATTCACATGCATTTgccgattttaattgaaaatcacGATCCTCTACCGCAATTAATCTGCTCAGATTGCTATGAAAAATTAGAAGCATCGCATTCACTCGTTATAACATCACTACAAACAGatataagattaaaaaagtatttaaatattcctTGCAAAtataatgCAGAGAAATTTAGTGATTTAATATCAATGGAAGAATTGCAAATAAACGACGagttaaatacaaatattatatCACCAATCGAAGAATTGtcaataatggaaaataaatcaaaagcCAGAGTATCAAcaagtgaatttaatttaacaattgatAAGAATTCTTCGGATCAAGTGGTTAATCAATCTGCAATTCAatgtataaacaataattcatTGTGCTCAAGAGTAGATAATCgcttaaaatttgtttttcatccagaattaaataatttaatactcGAACCTTTGCAGCCATTAGCTGACACTAGTAATTCTTCGCTAGTAGTCAACAGTGATCTAGTGATCGAGGAAaatctcaattgtttaaagCACAATGAATTTCAGCAGCCAAGTGACAGTACAGAAAATAGTACGACTGTTTTCAAGCAAGAAACTGGatacaaagagaaaaaaacgaaattcaaCTGCGATAAATGTGATTTAATGTTTGATAAAGTGGAAGAATTAAATTGTCACCGGGAAATTCACGTgaaaaaagatatttcgagTCATCGACGAAGGTGTGGCCACTGCTCACTTCCATTTGCCAACCGTAAAGAGCTACAAACACACATTACCGAGGCTCACACGAGCCATCAAATGCTTTTTAAATGTGGCACGTGTGATAAAATCTATGAGAAGTGGTCGAGTTTAGATGTACACGAAGCTACACATCGACACGACAAACCTTATCTCTGCGATCTTTGTGGAAAAAGCTTCAAACACTCGAATAATTTACGTGGACATAAACGAATTCACTTGgatattgctaaaaaaaagaagcatgTCTGTGAAATTTGTGGCAATGCATTTAGATCCAgATTTCATCTGGGTGAGCACATGAATCAGCACGATGGTAATAAACCGTATGTATGTGAACAATGCGGTAAAGCCTTTTCAAAACGAATACAATTGCGTCAACACCGACTTTCGCATGGAGTGAATAAATATGCCTGTCCAATTTGTGGAGTAACTTTCAATCGCAGAGGAAACATGAATAGTCATCTGAAGCGTCATAGCAGCAGTGACGGAACGTACACATGCAGTGTGTGTGAGCAGAAGTGCCAGTCAATGAGCGAGTTAAAAATGCATCGTAAGCAACACACAGAAAATGACATTGTCGAGAGTATTAGGAAGAAATGCAGAGACAATACGCTGTGGCAGTGTAAAATTTGCACACGAGTATTCGCAAAACGCAGTGCTCTAGTAAGTCATGAGCGTAAACATGACGCAAATCAGGTGCGAATCGAGTGCAAagaatgtggaaaaaaattagcaaactGTAATTCACTGAAATACCACACAAAATCAGTGCACACGAGCGAACGCCCTCACGAATGTCAACACtgcaaaaatacatttatctCCAAAGAAGCAAAATTGATCCACGAACGAATACACACTGGCGAACGTCCTTACGCATGTAAATTATGCAATATGCAGTATAGGTGCTCGAGTAATCTCAGTCAACACATGAAAGTTCATTGTGATGTTCGACCTTATTTATGCCAATATTGCCACAAAAGTTTCACACGAAAAGGTGGACTAACGGTGCACGAACGAATTCACACGGGTGTCAGGCCGTTCGCATGTGCCATATGTGACAAAAGATTTTCACAGAAAAATGACATGATTAAACACACGAAAACAcatcaatcaaataaatcacTGCGTTGTGAGGATTGTAATAGAATTTTTGCCAGTAAAACTGAAATGTTTGAACATCTTGAAACAATCCACAAATCGAATTCTACAACAATTATTGAGACAACTGATGATGCGTTAATAAATAACTCACATATTTATTCACTCGATGTATCCTCTAGAtaa
Protein Sequence
MKIICAASSCKYSSENEDSSNTVFISFPNDETSTIWAHNCGRPDLMIKSNEELHRNYYICSNHIEDRFFLSKSNELSIAEGAIPTRFLMDCQSPDFHHTHKEQYSPDNVVESLQLTNCINNSCPLPSSEYENTLYNAELHEDNCMTTDDNTSADNHSNFCNISMNMSEMTVRFSDLCRICGQTTTNGFNIFKSDNELKIKDKIHMHLPILIENHDPLPQLICSDCYEKLEASHSLVITSLQTDIRLKKYLNIPCKYNAEKFSDLISMEELQINDELNTNIISPIEELSIMENKSKARVSTSEFNLTIDKNSSDQVVNQSAIQCINNNSLCSRVDNRLKFVFHPELNNLILEPLQPLADTSNSSLVVNSDLVIEENLNCLKHNEFQQPSDSTENSTTVFKQETGYKEKKTKFNCDKCDLMFDKVEELNCHREIHVKKDISSHRRRCGHCSLPFANRKELQTHITEAHTSHQMLFKCGTCDKIYEKWSSLDVHEATHRHDKPYLCDLCGKSFKHSNNLRGHKRIHLDIAKKKKHVCEICGNAFRSRFHLGEHMNQHDGNKPYVCEQCGKAFSKRIQLRQHRLSHGVNKYACPICGVTFNRRGNMNSHLKRHSSSDGTYTCSVCEQKCQSMSELKMHRKQHTENDIVESIRKKCRDNTLWQCKICTRVFAKRSALVSHERKHDANQVRIECKECGKKLANCNSLKYHTKSVHTSERPHECQHCKNTFISKEAKLIHERIHTGERPYACKLCNMQYRCSSNLSQHMKVHCDVRPYLCQYCHKSFTRKGGLTVHERIHTGVRPFACAICDKRFSQKNDMIKHTKTHQSNKSLRCEDCNRIFASKTEMFEHLETIHKSNSTTIIETTDDALINNSHIYSLDVSSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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