Mcin015895.1
Basic Information
- Insect
- Macrocentrus cingulum
- Gene Symbol
- -
- Assembly
- GCA_002156465.1
- Location
- MVJL01004861.1:45326-54837[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 4.2e-06 0.00058 20.3 1.0 1 23 218 240 218 240 0.98 2 32 0.0017 0.23 12.1 1.8 1 23 263 286 263 286 0.96 3 32 0.00034 0.047 14.3 0.6 2 23 293 315 292 315 0.96 4 32 0.00015 0.02 15.4 0.5 1 21 337 357 337 358 0.95 5 32 0.00053 0.073 13.7 0.2 3 23 469 489 468 489 0.97 6 32 0.013 1.7 9.4 0.1 1 23 495 518 495 518 0.86 7 32 8e-05 0.011 16.3 0.1 1 23 602 625 602 625 0.96 8 32 0.0049 0.67 10.6 0.5 1 23 631 654 631 654 0.96 9 32 0.1 14 6.5 1.9 1 23 667 689 667 689 0.97 10 32 2.8e-05 0.0038 17.7 1.1 3 23 734 755 733 755 0.96 11 32 5 6.8e+02 1.2 0.2 1 23 787 810 787 810 0.79 12 32 1.2 1.6e+02 3.1 2.2 2 23 817 840 816 840 0.94 13 32 2.1 2.9e+02 2.4 0.0 2 23 849 871 849 871 0.84 14 32 0.0011 0.15 12.7 0.0 2 23 878 900 877 900 0.96 15 32 7.9e-06 0.0011 19.4 1.0 1 23 908 930 908 930 0.98 16 32 0.066 9 7.1 0.2 3 23 962 984 960 984 0.87 17 32 0.00037 0.05 14.2 3.2 1 23 987 1010 987 1010 0.97 18 32 0.0024 0.32 11.6 0.4 2 23 1017 1039 1016 1039 0.95 19 32 0.0024 0.33 11.6 4.9 1 21 1065 1085 1065 1086 0.95 20 32 0.0018 0.25 12.0 1.8 2 23 1100 1121 1099 1122 0.93 21 32 0.24 33 5.3 1.1 1 23 1125 1148 1125 1148 0.94 22 32 0.029 4 8.2 3.5 2 23 1155 1178 1154 1178 0.93 23 32 0.65 89 4.0 0.2 2 23 1186 1208 1186 1208 0.95 24 32 9.1 1.2e+03 0.4 0.0 2 23 1215 1237 1214 1237 0.86 25 32 0.15 21 5.9 2.7 2 23 1246 1268 1246 1268 0.96 26 32 0.87 1.2e+02 3.6 0.9 2 23 1274 1296 1274 1296 0.92 27 32 0.0016 0.22 12.2 0.3 1 23 1358 1381 1358 1381 0.97 28 32 0.00015 0.021 15.4 3.0 1 22 1407 1428 1407 1428 0.96 29 32 0.33 46 4.9 1.3 2 23 1528 1550 1527 1550 0.94 30 32 0.26 35 5.2 1.1 2 23 1557 1579 1556 1579 0.94 31 32 0.47 64 4.4 2.5 1 23 1590 1612 1590 1612 0.97 32 32 0.32 44 4.9 0.1 3 21 1621 1639 1621 1640 0.95
Sequence Information
- Coding Sequence
- ATGGAGTTGCGAGAACGCTACGACGAGCTTTGCAGGCTCTGTGCCTCGTATGACGCCGTTAAAATGGATATATTTGGCCAAGAGGGCAAAAATCGTCAGCTAGTTGACAAGATTCAGACGTGTTTGCCGTTCAAGatTGCTGAGGATGATCGATTGCCCAAGTGTTTGTGCTACAGATGTATGTACaatttggagaattttttcgactttagGACAGCATGCGTGAATGCTGTGGCAATGCTGGAGCGATCTCTTCCATCAAACACAtcgggtgaaaaaactgttaaacttgaaaaacactCGGAATTGCGTTCTGTGTTATtaaaagaaaaggaaaaaatgccAATTCTCATACCTGAAGCTCCGATAGTCAACCCCAATGCAGCCCTTGGGACGCCACCACGATTAAATTCTGATGGAGAAGCAGATCAGGAAATCGAAGAAATTCTGGAGCACAGCGGTACGGAAGAGGgCATTGAAGATGTGGATGATCGAAAGTCGGATGAGTACGAAATGGACATGGAGACAAATCcaagtgattttttggaaatgCCACCGATGGTAACAGAGGAAGAGTCTGACATACGGAGTCAGCCAATAAAACCTCAAGCTCCAGCAGTCTTCCAGCATACCTCTGAGCAGCACGAGGTGTATGTGTGCTCGTTGTGCAACAAAGCTTTCAGCTCCAAGGGACATTTGTCGCTGCACGCACGAATTCACGTGGGCGCAGGAGATGTTATAGGCGAGAAAGTTATTACTGACGATCACACATCGTATAAACGACCTTATCAGTGTGATTTATGTAATAAATCGTATTCAACGGCAAAGCATCGATGGGGCCACGTTTCAACCAGCCACAGAGGACATCCAGCAGTTACTTGTAGATATTGCTCGCGAATTTACTCAACTCGTATCAATTTGGAGGAGCATATTAAGTCAAGGCACACGGGTTTGCCGCCGCCAGCTGAACAGCAGCTCACGATGCCATACGTACAGCCGGAAAATCGTTATCAGTGCAAAACTTGCCCGAAAATGTATACAAACGTCACGGATCTGAACAAACACAGTCGAATTTGTGCCGGAGAGcggacaaaaaaatcagcagctCACAGCAACGTCCTTCGTCCAGCTAGATCCAAGGGCAAGAGCCTCATGGACACATCGGAGGCCTCGAGCGCCGAGtctgatgatgataataataaagattACAAAAATGCCGAGgcaaaattatcgaaaaatccgCAGCTAACAATTCTCAAGCAGGCTTTAACGAGAAATGATGGCTTGAAACGCGGCGGCGGCGAttctgagaataaaaattcaccgtTAAAATCTTCCAAGGCACTTCATGACACGAGCAATCATCATGCCGGTGACAACAGTGAGCTTGAAAAACGATGGTTATGCGAAACTTGTCCTAAATCATTTACATCAGTGGATACTTTGAAAGAACATGAAATAAGTCATGAAGCAGATAAGCCATATATTTGCATATTAtgtgaaaaagtttttgttttaaaatcatcattgaGTAGGCACATTGTTGCATCGCACGGAGTTGACCCAATTCCTATAATCGACAGTgataaatgtttgaaaaaaaccgTGATGGCACAGATGAATGCAAAGCACGCTTTACGCGTTGAAGAATTACGAAGTAGTAATCGAGAATCGTCCGAGTCGTCGTTTTCACCAGTGCCGCAGATCGATCAGGAGGAGGATGACGGTGGAAGTGCCAGTGGCAGCGGCGGCGGCGTTAGGGGCGGTAGCGGTCAAGATAATCTGATTGAAATTGAGACAGTTTTTGTTTGTGAAATATGTACACGTGATTTCAACGATCGAGCCTCACTGTGGCTGCATATTCGGGCAACTCACAAAGAATACGCTGCATTTGCTTGCGGAGTATGTCTGAAAATTTGCTCAGACAATGAACAACTGTTAAATCATGTTAATATGTATCATGGAGGCTCGAAACTCCTTGTTTCCGAGCAACGTCGCTACAGCTGCACTATCTGCGGCCGACAGCATGATtcacggaaaaaattaatgactcACGTGTCAATACACAATGTAGACCCCAACTATGATCCAGCAAGTTTTGTTCAGCTTAATACAAATTACtacaatgaaaatatcaatagTAATGAAGCTCAGGAGCAGCCGGTAGATTTTGATAACGATGACGGTGAGAAAGTTGACTGCTTTATATGCTATAAATCATTTCCAAATGAGGATCACTTGATTCGTCACCAAAGAAATGCCCACAAGTCCGAGTCCGTGGTTTTCAGCGGTGAATCAGGCAATATGAACAATTTAGGAATTAATCCCAACGGTAATAAAGCTCAATATCACTTGTTTTTCGTGTGTGAACTCTGTGGAATGTCACATCCAAGCAAATGGGAGCGTTGGTTGCATGTGAGCAGTATGCACGGTGATGAGCCGTTAATTCGCTGTGATAAGGAGGACTGTGCGAAAATATTTGCCACAAAAGCGCTGAAAAATGAGCACCATCAACACCACCTTATTCAAGGAGCATCGCCGAATACTTGTGAAATTTGCGGTAAACTTTGGGGCAGTCGGGTGGACTATTGGAAGCACGTGATGGGCGTTCACTCTGACACTGTGCCGTTAATTTGTGGTGTATGTTTAAAAGTCTTTCCCGATGTTGTTCAACTTGCTCGCCATGTAAGAACCAAACATTGGCCCTTGACTAACGGTGATTTCAGCTGCGATATTTGTGGTCGTCCCTACTCAAACAAGTCTAAAATGCTGCGACACCGAAAAATTCACGGATTGGATGCCGAAGGATACAACAATGGCTTGAATGAATctgtaaatgattttataaaccCGGAACCTAATGCTCCAGAGCTCGATATGAGCTGTGACATATGTGTAGACATACCATTCTCAAGTTGGGATGAACTTTGTCAACATCGACGTGCAGTTCACGGTCTGTTTCCCTGCGATCTCTGCAGCAAATGCTACGGGAGGACCTCTCACCTTTGGAAACACGTCAATCGAGTTCACAAGGGTCACAAGGACGTCACCTGCCGATACTGTTTGAAAACCAGTGCATCAAAGGATCATTTGGCTGCTCACATTGCCAAGATTCACCGATACGAGCCGGAAAAAGAATCCATACGCGATTCTACGAGTCAAAAGATCCAGAATGTTGAGGAAGACATTGTTCATTACTGtcaaaagtgtaaaaaaggCTTCCACAAGCGTTATCTCCTGCGGCGTCACATGAAGGGCTGTCAAAACTATCGAAAAGATCCAGGAGCTTTGCTCACTCGCTGTCGAGCGTGCGAGAGAATATTCAAGGACCGTGCCAGCCTGcaaaaacacattgaaaatCATCACTCGACCTACACGTGTCACCTGTGCAACGAAACAATCACCTCGAAGCTCGGAATCATGACTCACAATCGTGTCAATCACATGGATCATCCGGATCTTACGTGTAGTCAcagcaattgtaaaaaattatttcgaacaAAGGAGGATTTGGAGTCGCATAAAAAGGATCACAAGTATCACAACAGTCCGAATGTCTGTGATTTTTGTGGTGACACTGTGGACAATAAGCTCAAGCTCAAGATGCATATTCTATCGTTGCATCGCAATGAGATTGGTGTTAGCTGTGGAGTTTGTCTAATTCCCATGAAAGATCCTcaggaattgaaaaatcacgttGAAGACGTTCATCCGGGGGTTTTATTGAAGCCAAATACATGCCAGGTATGTGGAAAACAGTATGCCTCCAAGTGGAAGGCCTTTGATCATACGAAAAAATGCCACGGAAAGGTTTTTCGCACGTGTAAACAGTGTTTGGCCGTTTTTACCACCGATTCCGACATCAGATATCACTATGAGCACATACACAATGTGCCGAAAGATCAGATTTCCGGCGTGGAAAATCATCTAGACTTGTCGGCAAAAGGTGACGACGCGGATGCATCGGGAGTGTCTATAAAGGATGAGCCTTATGACATGGAATACGACGATGGACTGTACGATGATATTCCTCACGTGCGAGAATCTAATCGTAAACGACCGCACGATACTTATGACTGTGAAATGTGtccagaaatatttttaaacaaagatACACTGTCACAACATTATCGAACAATTCACAATATTGATCCTGATCGAATGTTTAAAAAGGCTAAAACCACGTCATCaaagaaaaagatgaaaaatcgtgAGAATTTTGAGTGtcaaaattgtaataaacaattttgtacaaaatcattattttggaATCATATTAATACTTGTACAGATAAAACAAAAGATCCTACCTCGACACCATCGAAATTTACCGGATCTATTCTCGAgtcacacttgaaaaataataatcaaattaaaaaagagcCAGTTGAACCGATGCTCGAATCAAATCTCAATATCCCGGATTTTAATCTTTTTGAGGACATCAATATGCAGCTATCTGGACAAAAGCCTGTGCCGAATTTAATGCCACTGTCTCAGATAAAACCATCGCAAGGTTCAATTAAATGCTACCGCAAGGATTCACGCAAGGTTTACGATGAATCAACGAATACCGTGTGTGCGTGCGAAGTGTGCGGCAAGCAGTGGCCAGCAAAGAAGCATCTCTGGCAGCACTTGATAAGATTTCACCGAGCCGAGGCGGCAGTAACTTGCGGAGTGTGCCTGAAGCTCTGCACCAACTACAAAGACCTGTCGCAACACTTGAAAGACGCTCACGAGGCGATACTGTCGGGTGAGGGTAACAATTTCACTTGTAAAACATGCGGACGCTACCACAACGCTCGAAGCAAGCTGCTGCTCCACATGAGCATTCACATCAACAACAACGAGCAAATCTGGTGTCAAAAGTGCGCGGCGAATTTCGACAGTGCCGAGAAACTGGAGCAGCACATGGCAAAGTGCATTGCCAAGCGAAAAATCGAGGGAAACGAGTTTGAGGACCAGAGCAACGACGTGGAAGACCCGAAAGCCGATGGCGAGGAGGACAAAGGCAGCCTGATTGGTGACAGTGCGTCGCTGCTCGGGGAAGGTGACGAGGAGGAGGCAGATTTCGACTCGGAGGCTGAGGAGGAAGTTTCGGTGAATGCCGAGGAGGAAAACAGTCACTCGGACAGTTCCAATGACTCGGACAGTGATGCTGCAACAAGTGCTAGTGAGAATGAGGAGGATAATGACATCGAATCACGATCAAATAGTCGAATAACCGGCGACGTTAGTTATCACACAGACACCGACGTTCATGATTCCGAGGTGGAGTCTGAGATTGAGGATATTCAAGAGGAGAGAGGACCATCGCGCCGATCAATTCAGTCAAGTGAGAGCAAGAGTAACCACAAAACATCTCTAAAAAACGACAACAAGTCGAATTCAAGTGTAAACTCACGTGTCAAGGGTAAAAAACAAGTTGATCCGGCCGATACTGATGGAAAGGAGCGTCACAAGGAGGAGGGTGAAGACTCGGATGACGATGGCCCACCGGTTTTGAGTCCTATACGACCACTGTCATCGAATAATGAAGGCGAAGAGGCTGAATACAGTCCGGaggatgatgaaaataataaattaagtcCGGAAGCGCAGGAAAATCCGGCTGAGGAGGAGGTCGCGTCGGAAAATGATGATGTTGATAATAATACGGAAAAGGACATGTCGGTGCATTCAAACACTGTGgatgatgatgaattttcgGCAGCCAAGTCTAACACCAGTGCAGGACTGTCTGGAGAGGATGATTCGGATGGTCAAGCGGAACAGGATGACAATATGGAGGATGATGACAGTAGATTGCATATGGAGCATTCTGAAACGgaaaaaccggaagaaaacACGGGAGATGAGGAGAATGACGGTGGGGATGAGGAATATTGTGAAGGTGAAGAGAGTCAGGATATGCAGCTTGATGATTTAGATGGTACTGTCCTTATGGTTGCTAATGATGCTGAAggaaatgaaatattgatcCAGCAAAATGTGGCGGAGATGAGCAACgaagaggaggaagaggaggaggagggaTCGATGGGAGAAGTGGCGGATTTTTCGTATCAGAATGAGGAGGGAAATTCTGAGGATGAGTATCGAGAACAAACGAgtgaaattcaaaataatgaaGATGAAGAAATGttagaggaggaggaggaagaagaggaagaggaggaggagcCGGAGGAGGCAAGAGAGGCAAGTGACGATTTGGAGGCTAATTCGAGTGCCAAAAATAAAGTGTCAAGGACAtag
- Protein Sequence
- MELRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFFDFRTACVNAVAMLERSLPSNTSGEKTVKLEKHSELRSVLLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILEHSGTEEGIEDVDDRKSDEYEMDMETNPSDFLEMPPMVTEEESDIRSQPIKPQAPAVFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTSHRGHPAVTCRYCSRIYSTRINLEEHIKSRHTGLPPPAEQQLTMPYVQPENRYQCKTCPKMYTNVTDLNKHSRICAGERTKKSAAHSNVLRPARSKGKSLMDTSEASSAESDDDNNKDYKNAEAKLSKNPQLTILKQALTRNDGLKRGGGDSENKNSPLKSSKALHDTSNHHAGDNSELEKRWLCETCPKSFTSVDTLKEHEISHEADKPYICILCEKVFVLKSSLSRHIVASHGVDPIPIIDSDKCLKKTVMAQMNAKHALRVEELRSSNRESSESSFSPVPQIDQEEDDGGSASGSGGGVRGGSGQDNLIEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGVCLKICSDNEQLLNHVNMYHGGSKLLVSEQRRYSCTICGRQHDSRKKLMTHVSIHNVDPNYDPASFVQLNTNYYNENINSNEAQEQPVDFDNDDGEKVDCFICYKSFPNEDHLIRHQRNAHKSESVVFSGESGNMNNLGINPNGNKAQYHLFFVCELCGMSHPSKWERWLHVSSMHGDEPLIRCDKEDCAKIFATKALKNEHHQHHLIQGASPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVVQLARHVRTKHWPLTNGDFSCDICGRPYSNKSKMLRHRKIHGLDAEGYNNGLNESVNDFINPEPNAPELDMSCDICVDIPFSSWDELCQHRRAVHGLFPCDLCSKCYGRTSHLWKHVNRVHKGHKDVTCRYCLKTSASKDHLAAHIAKIHRYEPEKESIRDSTSQKIQNVEEDIVHYCQKCKKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCSHSNCKKLFRTKEDLESHKKDHKYHNSPNVCDFCGDTVDNKLKLKMHILSLHRNEIGVSCGVCLIPMKDPQELKNHVEDVHPGVLLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTTDSDIRYHYEHIHNVPKDQISGVENHLDLSAKGDDADASGVSIKDEPYDMEYDDGLYDDIPHVRESNRKRPHDTYDCEMCPEIFLNKDTLSQHYRTIHNIDPDRMFKKAKTTSSKKKMKNRENFECQNCNKQFCTKSLFWNHINTCTDKTKDPTSTPSKFTGSILESHLKNNNQIKKEPVEPMLESNLNIPDFNLFEDINMQLSGQKPVPNLMPLSQIKPSQGSIKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCTNYKDLSQHLKDAHEAILSGEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEQIWCQKCAANFDSAEKLEQHMAKCIAKRKIEGNEFEDQSNDVEDPKADGEEDKGSLIGDSASLLGEGDEEEADFDSEAEEEVSVNAEEENSHSDSSNDSDSDAATSASENEEDNDIESRSNSRITGDVSYHTDTDVHDSEVESEIEDIQEERGPSRRSIQSSESKSNHKTSLKNDNKSNSSVNSRVKGKKQVDPADTDGKERHKEEGEDSDDDGPPVLSPIRPLSSNNEGEEAEYSPEDDENNKLSPEAQENPAEEEVASENDDVDNNTEKDMSVHSNTVDDDEFSAAKSNTSAGLSGEDDSDGQAEQDDNMEDDDSRLHMEHSETEKPEENTGDEENDGGDEEYCEGEESQDMQLDDLDGTVLMVANDAEGNEILIQQNVAEMSNEEEEEEEEGSMGEVADFSYQNEEGNSEDEYREQTSEIQNNEDEEMLEEEEEEEEEEEEPEEAREASDDLEANSSAKNKVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -