Basic Information

Insect: Macrocentrus cingulum
Gene Symbol: -
Assembly: GCA_002156465.1
Location: MVJL01001271.1:36200-39764[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.096 13 6.6 2.9 2 23 190 212 189 212 0.96

2 21 0.0081 1.1 10.0 1.8 1 23 252 274 252 274 0.97

3 21 0.03 4.2 8.1 0.4 1 23 323 345 323 345 0.98

4 21 0.0023 0.32 11.7 0.4 1 20 375 394 375 396 0.94

5 21 0.16 22 5.8 2.4 1 23 408 431 408 431 0.92

6 21 4.2e-05 0.0058 17.1 1.2 1 23 436 458 436 458 0.97

7 21 0.0003 0.042 14.4 0.1 2 23 464 485 463 485 0.96

8 21 0.0032 0.44 11.2 0.0 1 23 491 513 491 513 0.93

9 21 7.1e-07 9.7e-05 22.7 0.1 2 23 534 556 533 556 0.96

10 21 1.9e-05 0.0025 18.3 0.5 2 23 560 581 560 581 0.98

11 21 0.00029 0.039 14.5 1.2 2 23 586 608 586 608 0.97

12 21 0.00051 0.07 13.7 0.5 3 23 617 637 616 637 0.94

13 21 0.0016 0.22 12.1 0.5 2 20 681 699 680 699 0.96

14 21 0.0036 0.49 11.1 0.0 2 23 718 739 717 739 0.96

15 21 3.7e-05 0.005 17.3 0.4 2 23 753 774 752 774 0.96

16 21 0.00054 0.073 13.7 0.1 1 23 794 817 794 817 0.90

17 21 0.038 5.2 7.8 0.3 2 23 869 891 868 891 0.95

18 21 1.3e-05 0.0017 18.8 0.5 2 23 914 936 913 936 0.94

19 21 0.068 9.2 7.1 0.4 1 23 942 966 942 966 0.96

20 21 0.0077 1 10.0 1.4 1 23 971 994 971 994 0.97

21 21 0.039 5.3 7.8 0.0 2 23 1024 1046 1024 1046 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.096	13	6.6	2.9	2	23	190	212	189	212	0.96
2	21	0.0081	1.1	10.0	1.8	1	23	252	274	252	274	0.97
3	21	0.03	4.2	8.1	0.4	1	23	323	345	323	345	0.98
4	21	0.0023	0.32	11.7	0.4	1	20	375	394	375	396	0.94
5	21	0.16	22	5.8	2.4	1	23	408	431	408	431	0.92
6	21	4.2e-05	0.0058	17.1	1.2	1	23	436	458	436	458	0.97
7	21	0.0003	0.042	14.4	0.1	2	23	464	485	463	485	0.96
8	21	0.0032	0.44	11.2	0.0	1	23	491	513	491	513	0.93
9	21	7.1e-07	9.7e-05	22.7	0.1	2	23	534	556	533	556	0.96
10	21	1.9e-05	0.0025	18.3	0.5	2	23	560	581	560	581	0.98
11	21	0.00029	0.039	14.5	1.2	2	23	586	608	586	608	0.97
12	21	0.00051	0.07	13.7	0.5	3	23	617	637	616	637	0.94
13	21	0.0016	0.22	12.1	0.5	2	20	681	699	680	699	0.96
14	21	0.0036	0.49	11.1	0.0	2	23	718	739	717	739	0.96
15	21	3.7e-05	0.005	17.3	0.4	2	23	753	774	752	774	0.96
16	21	0.00054	0.073	13.7	0.1	1	23	794	817	794	817	0.90
17	21	0.038	5.2	7.8	0.3	2	23	869	891	868	891	0.95
18	21	1.3e-05	0.0017	18.8	0.5	2	23	914	936	913	936	0.94
19	21	0.068	9.2	7.1	0.4	1	23	942	966	942	966	0.96
20	21	0.0077	1	10.0	1.4	1	23	971	994	971	994	0.97
21	21	0.039	5.3	7.8	0.0	2	23	1024	1046	1024	1046	0.93

Sequence Information

Coding Sequence: ATGGACGATGTGGTGGAGGTGTACAACGTCCAGAACTTGTGCCGACTGTGTCTGTCGACGGACGAGCCACGATCACCAATCTTCGGCGTCCAAGACTCGGCACCAACGCTTGCGGACAAAATCCAAGCGTGCTTGTCGATCAAGATAACCTCCACCGACAAATTATCCACCGTAATTTGCGTGAGCTgcgtaaaaaatatcaatcaatgGCATACATACAAGTCATCATGTTTAAAATCTCAGGACAAGCTCGAAAAATGGTTGGCAAATCAAAAATCAAGCGAGGTGTGCGCTGTAAAAACCGAGCCCCTGGATCCTGACGAGAGTATTGAACTGGTAAACATGTCAGACAATGATTCAATAGCTCTTCGTGGGTCAGAACCCGTGAAAATTGAGCTTGACGACGACTCCGAGTCGGTGGTTGAGGGTGAATTGCTGTTAAACCCCATGGCACTGAATGCCAACAAGTCAATGGAGCCCGATTCAacagagaaatttaatttacgcaagaaaaaaattcgtcgtgGGCCTCATACACACTTTCGTGGCGTCAAAGTATACAAACAGCGCTGTAGCCAGTGTCAGCTGGTGCTGCACTCGAAGAAGAGCTATGCCAAGCACATGGAGCGCTATCACGCCATGCCAGCCAACGGTTTGGAGGAGGTAGAGGACGTAGAGGAGGAATTAATGTCTCTGGAGAAGGATGCACCGTTGACAAAGGTGCAAGAGTCGATTATCAGTCAATTAAAGACATTTTCTTGCTATGCCTGCCAGCAATCCTTCAGCGATCGTCGCAGCACGCTTAATCACATCCGTCAGCACATGCCGGACCTTCGGCCCTACACGTGCATTGCCTGTCTCACGGAATTTCCCGATCGTTCCATCTACAAGCTTCACTGCGGCGCGTCGTTTGAGTGCGCGATGAAAATTGCGCTGGTTGTACCCAAGCACGGCACCGAGAAGTACTTTACATGCAACATGTGTCTGCGACCAATGCCCAATCGCAAGGAGCTCATCAGCCATCTCTCGAAGCACTCGGACCGTCAGTATGAGGCTCTGACGGCTCCAAAATCCAAGCCAAACGCCGCGGGACCCTATCGCGAGGGCAATCCCGAGCACAACCACACTTGCGAGTACTGTGGCATGATTTATCGCTACAAACCCAACATGCTCAAGCACACAGAGCTGTGCAAGCGTCTGCCACCACACGAGCGCACCTCCTATCGCTGTGTTCACTGTGGCATGACGTTCctcgtgtttaaaaaattccagtcgCACCTGGTGACTGAGCACGGACGCAAGGACTTTGTGTGCTACGATTGCGGCGAGAAATTCGCATTTTCCAGCGAGTTCCAGGCCCACCACGTGACCCATCGAGGTGAGAAATTAGTTTGCGCCGTGTGCTCAGCGGAATTTTCCACTCGGGCCGAGTTGACGGAGCATCGTAATACCcatttaaagatgaaaatctTTTCCTGCACTGTTTGCCGACGTATGTTTGGTAATTCAGCGGCTTTGGCCGAGCACGCGGCAGAACATGCTGAGAGCGCCGACTCCCAGAGCGAATCGGAGGAACCTAAATGGGATTCCCGCAGTACCGAGTGCGCTACTTGTGGTAAAGTTTTTGCAAATTATCCGAATTTGCGTCGGCACATTCGCTCTGTGCACTCGGAACGAAAGTGTCCAAAGTGTTCGAAGATTTTCACGAGCGAGGCTGAGCTGAGCGAACACGAGCGAACGCACGAGCCGAGCGAGCGCTGTGGCTATTGTAAAAAACGCTTTGAGACGCGTGAGGCAATGAATTTGCACGCCCGCACTTTCCACGGCGCCACCGAGGACAGTCAGGCCTGCGATATTTGCGGCAAAGAGTTTGGCAATGAGACATCACTCAAGATTCATCGTGGTCACCATTTCCGCCGGGATTCTCGTCTCAGTATCCGCAATATTCCTCATCCCATGGACGCAGTGGCTGTTGAGATGACTGAGCCCAAGCGCACGCAAGCTACTGTGGAGAATGGAACTCCGCCACGCAGCGATATGCAGTGCCAGGTGTGCGATGAGCAATTTAACAATGTGCACGACCTACGCAAGCATCTCTGGGAGGTTCATTGTGCGAAAAACAAGCCGGAAAAGTCGTTTGGCGATGAACTCACGTGCGAACTCTGCACCAATGTGTTTGCGGACACGGCAGGGCTGGAGGAGCACATGCAGTGGCACAAGGACAATCCCATTTTGGAGGAACGCAATGTTGACATCTCCTGCGATATTTGCGGCAAGTTTTACAGCTCACTCAAGGCCCTGTGGAAGCACAAGAAACTTCACAAAGCGAGTAACGCCGCGTCAGCCAAGCTGAGCGTTAAAAAGCCGGCTCCAACGCAATTTCCCTGTCCAGTTTGTCGAAAGGTCTTTGGCAATGAGACCTCGATGAAGAAGCACAAGGCTGCGGCGCACTATGTTCGTCGGACAATTGCTGGCACGGATGTGGAAGAGGAGGAGGCGGCCGTTAAACCCAAGCGGCCAAAATTGGATTTTGATGTTATTCGCAAGGCATACAATCTTGGACAGCCCAGTAGCAGTTTGAATCCAAGCAGTAAAAAACCCGTGACTTGTGGCATTTGTAAGAAATTATTGCCGAGTATGAGCTCGCTGTATAAGCATCGGCAAAATGTGCACAAGCAGGATTTAAATAAAAGTCTACCGAATCCGATTAGTGAAGAGGCGGATGATACTGCTGGCACTCCGTGCACTGATTGCGACAAAGTTTTCTCAAGTTTGGCTAATATGAAGCAACATTATACAAAAGTTCACGGCACTGGTGGCAAGTATTACTGCAATACGGATAGTTGCAACGAGGTGTTTTCCTCGCCGCTTGCTAAACAGCTTCATGAAAAGACTCACATGAATATGCTTTATAGTTGTAATATTTGTTCGAGACATGTTTTTACCAGGGGAGCTATGAGCAAACATTTATTAACTGAACATAAAGCCGAGTATCAGCCCAGTgctgaaaaaacattttatcgaaAGACCGATTTGAATAGCTATGTTGTGAAAAATGCTGAGGGTAGAGTTTGTCCGATTTGTAAAATTACTTATCCTAATATCAAAGCTATGAAGATACATTATGTCAAAATTCACGAGAGCAGTTAA
Protein Sequence: MDDVVEVYNVQNLCRLCLSTDEPRSPIFGVQDSAPTLADKIQACLSIKITSTDKLSTVICVSCVKNINQWHTYKSSCLKSQDKLEKWLANQKSSEVCAVKTEPLDPDESIELVNMSDNDSIALRGSEPVKIELDDDSESVVEGELLLNPMALNANKSMEPDSTEKFNLRKKKIRRGPHTHFRGVKVYKQRCSQCQLVLHSKKSYAKHMERYHAMPANGLEEVEDVEEELMSLEKDAPLTKVQESIISQLKTFSCYACQQSFSDRRSTLNHIRQHMPDLRPYTCIACLTEFPDRSIYKLHCGASFECAMKIALVVPKHGTEKYFTCNMCLRPMPNRKELISHLSKHSDRQYEALTAPKSKPNAAGPYREGNPEHNHTCEYCGMIYRYKPNMLKHTELCKRLPPHERTSYRCVHCGMTFLVFKKFQSHLVTEHGRKDFVCYDCGEKFAFSSEFQAHHVTHRGEKLVCAVCSAEFSTRAELTEHRNTHLKMKIFSCTVCRRMFGNSAALAEHAAEHAESADSQSESEEPKWDSRSTECATCGKVFANYPNLRRHIRSVHSERKCPKCSKIFTSEAELSEHERTHEPSERCGYCKKRFETREAMNLHARTFHGATEDSQACDICGKEFGNETSLKIHRGHHFRRDSRLSIRNIPHPMDAVAVEMTEPKRTQATVENGTPPRSDMQCQVCDEQFNNVHDLRKHLWEVHCAKNKPEKSFGDELTCELCTNVFADTAGLEEHMQWHKDNPILEERNVDISCDICGKFYSSLKALWKHKKLHKASNAASAKLSVKKPAPTQFPCPVCRKVFGNETSMKKHKAAAHYVRRTIAGTDVEEEEAAVKPKRPKLDFDVIRKAYNLGQPSSSLNPSSKKPVTCGICKKLLPSMSSLYKHRQNVHKQDLNKSLPNPISEEADDTAGTPCTDCDKVFSSLANMKQHYTKVHGTGGKYYCNTDSCNEVFSSPLAKQLHEKTHMNMLYSCNICSRHVFTRGAMSKHLLTEHKAEYQPSAEKTFYRKTDLNSYVVKNAEGRVCPICKITYPNIKAMKIHYVKIHESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -